Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01:02031
Extra
PDB:
ATOM 1 P A A 1 20.626 148.651 101.201 1.00 77.70 P
ATOM 2 OP1 A A 1 20.245 148.952 99.797 1.00 79.16 O
ATOM 3 OP2 A A 1 21.089 147.288 101.552 1.00 77.60 O
ATOM 4 O5' A A 1 21.745 149.698 101.625 1.00 73.14 O
ATOM 5 C5' A A 1 23.086 149.569 101.160 1.00 66.29 C
ATOM 6 C4' A A 1 24.026 150.325 102.065 1.00 61.95 C
ATOM 7 O4' A A 1 23.771 149.986 103.451 1.00 59.96 O
ATOM 8 C3' A A 1 25.482 149.979 101.829 1.00 59.46 C
ATOM 9 O3' A A 1 26.005 150.787 100.796 1.00 57.30 O
ATOM 10 C2' A A 1 26.110 150.212 103.193 1.00 58.32 C
ATOM 11 O2' A A 1 26.362 151.576 103.455 1.00 57.97 O
ATOM 12 C1' A A 1 24.992 149.719 104.115 1.00 57.80 C
ATOM 13 N9 A A 1 25.031 148.282 104.403 1.00 56.70 N
ATOM 14 C8 A A 1 23.986 147.385 104.348 1.00 55.73 C
ATOM 15 N7 A A 1 24.322 146.161 104.673 1.00 54.92 N
ATOM 16 C5 A A 1 25.677 146.252 104.956 1.00 54.33 C
ATOM 17 C6 A A 1 26.622 145.298 105.360 1.00 53.95 C
ATOM 18 N6 A A 1 26.343 144.008 105.545 1.00 54.85 N
ATOM 19 N1 A A 1 27.886 145.719 105.567 1.00 54.86 N
ATOM 20 C2 A A 1 28.174 147.010 105.368 1.00 55.39 C
ATOM 21 N3 A A 1 27.377 148.000 104.983 1.00 54.46 N
ATOM 22 C4 A A 1 26.127 147.551 104.793 1.00 55.16 C
ATOM 23 P U A 2 26.192 150.168 99.333 1.00 58.50 P
ATOM 24 OP1 U A 2 26.599 151.295 98.462 1.00 60.07 O
ATOM 25 OP2 U A 2 24.998 149.367 98.981 1.00 59.18 O
ATOM 26 O5' U A 2 27.420 149.166 99.499 1.00 59.26 O
TER
ATOM 1 O3' C B2030 30.022 138.916 111.545 1.00 43.21 O
ATOM 2 P A B2031 31.403 139.306 110.820 1.00 43.12 P
ATOM 3 OP1 A B2031 31.887 138.095 110.118 1.00 45.07 O
ATOM 4 OP2 A B2031 32.291 139.997 111.787 1.00 43.52 O
ATOM 5 O5' A B2031 30.966 140.379 109.731 1.00 44.10 O
ATOM 6 C5' A B2031 29.978 140.066 108.733 1.00 41.51 C
ATOM 7 C4' A B2031 29.642 141.303 107.939 1.00 40.91 C
ATOM 8 O4' A B2031 28.978 142.272 108.792 1.00 40.31 O
ATOM 9 C3' A B2031 30.851 142.048 107.409 1.00 41.76 C
ATOM 10 O3' A B2031 31.335 141.463 106.207 1.00 43.90 O
ATOM 11 C2' A B2031 30.305 143.453 107.219 1.00 40.15 C
ATOM 12 O2' A B2031 29.521 143.536 106.050 1.00 39.91 O
ATOM 13 C1' A B2031 29.400 143.586 108.447 1.00 39.76 C
ATOM 14 N9 A B2031 30.071 144.163 109.614 1.00 39.28 N
ATOM 15 C8 A B2031 30.506 143.478 110.722 1.00 39.10 C
ATOM 16 N7 A B2031 31.076 144.239 111.624 1.00 40.11 N
ATOM 17 C5 A B2031 31.017 145.510 111.077 1.00 37.04 C
ATOM 18 C6 A B2031 31.456 146.758 111.549 1.00 37.76 C
ATOM 19 N6 A B2031 32.068 146.930 112.724 1.00 33.85 N
ATOM 20 N1 A B2031 31.241 147.837 110.764 1.00 36.40 N
ATOM 21 C2 A B2031 30.632 147.657 109.589 1.00 36.70 C
ATOM 22 N3 A B2031 30.177 146.534 109.035 1.00 38.23 N
ATOM 23 C4 A B2031 30.400 145.483 109.839 1.00 38.21 C
ATOM 24 P C B2032 32.883 141.628 105.816 1.00 43.65 P
ATOM 25 OP1 C B2032 33.101 140.853 104.568 1.00 45.01 O
ATOM 26 OP2 C B2032 33.703 141.332 107.015 1.00 42.52 O
ATOM 27 O5' C B2032 33.023 143.183 105.491 1.00 42.23 O
TER
ATOM 2 OP1 A A 1 20.245 148.952 99.797 1.00 79.16 O
ATOM 3 OP2 A A 1 21.089 147.288 101.552 1.00 77.60 O
ATOM 4 O5' A A 1 21.745 149.698 101.625 1.00 73.14 O
ATOM 5 C5' A A 1 23.086 149.569 101.160 1.00 66.29 C
ATOM 6 C4' A A 1 24.026 150.325 102.065 1.00 61.95 C
ATOM 7 O4' A A 1 23.771 149.986 103.451 1.00 59.96 O
ATOM 8 C3' A A 1 25.482 149.979 101.829 1.00 59.46 C
ATOM 9 O3' A A 1 26.005 150.787 100.796 1.00 57.30 O
ATOM 10 C2' A A 1 26.110 150.212 103.193 1.00 58.32 C
ATOM 11 O2' A A 1 26.362 151.576 103.455 1.00 57.97 O
ATOM 12 C1' A A 1 24.992 149.719 104.115 1.00 57.80 C
ATOM 13 N9 A A 1 25.031 148.282 104.403 1.00 56.70 N
ATOM 14 C8 A A 1 23.986 147.385 104.348 1.00 55.73 C
ATOM 15 N7 A A 1 24.322 146.161 104.673 1.00 54.92 N
ATOM 16 C5 A A 1 25.677 146.252 104.956 1.00 54.33 C
ATOM 17 C6 A A 1 26.622 145.298 105.360 1.00 53.95 C
ATOM 18 N6 A A 1 26.343 144.008 105.545 1.00 54.85 N
ATOM 19 N1 A A 1 27.886 145.719 105.567 1.00 54.86 N
ATOM 20 C2 A A 1 28.174 147.010 105.368 1.00 55.39 C
ATOM 21 N3 A A 1 27.377 148.000 104.983 1.00 54.46 N
ATOM 22 C4 A A 1 26.127 147.551 104.793 1.00 55.16 C
ATOM 23 P U A 2 26.192 150.168 99.333 1.00 58.50 P
ATOM 24 OP1 U A 2 26.599 151.295 98.462 1.00 60.07 O
ATOM 25 OP2 U A 2 24.998 149.367 98.981 1.00 59.18 O
ATOM 26 O5' U A 2 27.420 149.166 99.499 1.00 59.26 O
TER
ATOM 1 O3' C B2030 30.022 138.916 111.545 1.00 43.21 O
ATOM 2 P A B2031 31.403 139.306 110.820 1.00 43.12 P
ATOM 3 OP1 A B2031 31.887 138.095 110.118 1.00 45.07 O
ATOM 4 OP2 A B2031 32.291 139.997 111.787 1.00 43.52 O
ATOM 5 O5' A B2031 30.966 140.379 109.731 1.00 44.10 O
ATOM 6 C5' A B2031 29.978 140.066 108.733 1.00 41.51 C
ATOM 7 C4' A B2031 29.642 141.303 107.939 1.00 40.91 C
ATOM 8 O4' A B2031 28.978 142.272 108.792 1.00 40.31 O
ATOM 9 C3' A B2031 30.851 142.048 107.409 1.00 41.76 C
ATOM 10 O3' A B2031 31.335 141.463 106.207 1.00 43.90 O
ATOM 11 C2' A B2031 30.305 143.453 107.219 1.00 40.15 C
ATOM 12 O2' A B2031 29.521 143.536 106.050 1.00 39.91 O
ATOM 13 C1' A B2031 29.400 143.586 108.447 1.00 39.76 C
ATOM 14 N9 A B2031 30.071 144.163 109.614 1.00 39.28 N
ATOM 15 C8 A B2031 30.506 143.478 110.722 1.00 39.10 C
ATOM 16 N7 A B2031 31.076 144.239 111.624 1.00 40.11 N
ATOM 17 C5 A B2031 31.017 145.510 111.077 1.00 37.04 C
ATOM 18 C6 A B2031 31.456 146.758 111.549 1.00 37.76 C
ATOM 19 N6 A B2031 32.068 146.930 112.724 1.00 33.85 N
ATOM 20 N1 A B2031 31.241 147.837 110.764 1.00 36.40 N
ATOM 21 C2 A B2031 30.632 147.657 109.589 1.00 36.70 C
ATOM 22 N3 A B2031 30.177 146.534 109.035 1.00 38.23 N
ATOM 23 C4 A B2031 30.400 145.483 109.839 1.00 38.21 C
ATOM 24 P C B2032 32.883 141.628 105.816 1.00 43.65 P
ATOM 25 OP1 C B2032 33.101 140.853 104.568 1.00 45.01 O
ATOM 26 OP2 C B2032 33.703 141.332 107.015 1.00 42.52 O
ATOM 27 O5' C B2032 33.023 143.183 105.491 1.00 42.23 O
TER
Atoms:
OP1: (20.245,148.952,99.797)
OP2: (21.089,147.288,101.552)
C3': (25.482,149.979,101.829)
C1': (24.992,149.719,104.115)
C5': (23.086,149.569,101.160)
O4': (23.771,149.986,103.451)
C8: (23.986,147.385,104.348)
O2': (26.362,151.576,103.455)
C6: (26.622,145.298,105.360)
C5: (25.677,146.252,104.956)
C4: (26.127,147.551,104.793)
P: (20.626,148.651,101.201)
C4': (24.026,150.325,102.065)
C2': (26.110,150.212,103.193)
C2: (28.174,147.010,105.368)
N1: (27.886,145.719,105.567)
N3: (27.377,148.000,104.983)
N6: (26.343,144.008,105.545)
N7: (24.322,146.161,104.673)
N9: (25.031,148.282,104.403)
O5': (21.745,149.698,101.625)
O3': (26.005,150.787,100.796)
OP2: (21.089,147.288,101.552)
C3': (25.482,149.979,101.829)
C1': (24.992,149.719,104.115)
C5': (23.086,149.569,101.160)
O4': (23.771,149.986,103.451)
C8: (23.986,147.385,104.348)
O2': (26.362,151.576,103.455)
C6: (26.622,145.298,105.360)
C5: (25.677,146.252,104.956)
C4: (26.127,147.551,104.793)
P: (20.626,148.651,101.201)
C4': (24.026,150.325,102.065)
C2': (26.110,150.212,103.193)
C2: (28.174,147.010,105.368)
N1: (27.886,145.719,105.567)
N3: (27.377,148.000,104.983)
N6: (26.343,144.008,105.545)
N7: (24.322,146.161,104.673)
N9: (25.031,148.282,104.403)
O5': (21.745,149.698,101.625)
O3': (26.005,150.787,100.796)
OP1: (31.887,138.095,110.118)
OP2: (32.291,139.997,111.787)
C3': (30.851,142.048,107.409)
C1': (29.400,143.586,108.447)
C5': (29.978,140.066,108.733)
O4': (28.978,142.272,108.792)
C8: (30.506,143.478,110.722)
O2': (29.521,143.536,106.050)
C6: (31.456,146.758,111.549)
C5: (31.017,145.510,111.077)
C4: (30.400,145.483,109.839)
P: (31.403,139.306,110.820)
C4': (29.642,141.303,107.939)
C2': (30.305,143.453,107.219)
C2: (30.632,147.657,109.589)
N1: (31.241,147.837,110.764)
N3: (30.177,146.534,109.035)
N6: (32.068,146.930,112.724)
N7: (31.076,144.239,111.624)
N9: (30.071,144.163,109.614)
O5': (30.966,140.379,109.731)
O3': (31.335,141.463,106.207)
OP2: (32.291,139.997,111.787)
C3': (30.851,142.048,107.409)
C1': (29.400,143.586,108.447)
C5': (29.978,140.066,108.733)
O4': (28.978,142.272,108.792)
C8: (30.506,143.478,110.722)
O2': (29.521,143.536,106.050)
C6: (31.456,146.758,111.549)
C5: (31.017,145.510,111.077)
C4: (30.400,145.483,109.839)
P: (31.403,139.306,110.820)
C4': (29.642,141.303,107.939)
C2': (30.305,143.453,107.219)
C2: (30.632,147.657,109.589)
N1: (31.241,147.837,110.764)
N3: (30.177,146.534,109.035)
N6: (32.068,146.930,112.724)
N7: (31.076,144.239,111.624)
N9: (30.071,144.163,109.614)
O5': (30.966,140.379,109.731)
O3': (31.335,141.463,106.207)
Image (generated by PyMOL):