ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01952:01927

Extra

PDB:
ATOM 1 O3' G A1951 103.647 112.322 107.615 1.00 50.36 O
ATOM 2 P C A1952 102.090 112.058 107.930 1.00 50.01 P
ATOM 3 OP1 C A1952 101.308 113.024 107.119 1.00 47.81 O
ATOM 4 OP2 C A1952 101.905 112.027 109.403 1.00 50.33 O
ATOM 5 O5' C A1952 101.802 110.592 107.369 1.00 51.84 O
ATOM 6 C5' C A1952 101.858 109.435 108.234 1.00 51.01 C
ATOM 7 C4' C A1952 100.600 108.598 108.099 1.00 51.27 C
ATOM 8 O4' C A1952 99.438 109.403 108.428 1.00 49.90 O
ATOM 9 C3' C A1952 100.262 108.058 106.720 1.00 52.13 C
ATOM 10 O3' C A1952 101.012 106.891 106.409 1.00 57.26 O
ATOM 11 C2' C A1952 98.777 107.742 106.858 1.00 51.14 C
ATOM 12 O2' C A1952 98.513 106.521 107.517 1.00 49.68 O
ATOM 13 C1' C A1952 98.305 108.897 107.741 1.00 49.72 C
ATOM 14 N1 C A1952 97.675 109.985 106.974 1.00 49.52 N
ATOM 15 C2 C A1952 96.281 109.986 106.830 1.00 50.16 C
ATOM 16 O2 C A1952 95.616 109.077 107.358 1.00 51.18 O
ATOM 17 N3 C A1952 95.692 110.974 106.120 1.00 50.01 N
ATOM 18 C4 C A1952 96.437 111.932 105.566 1.00 49.49 C
ATOM 19 N4 C A1952 95.815 112.883 104.876 1.00 50.50 N
ATOM 20 C5 C A1952 97.854 111.956 105.697 1.00 49.27 C
ATOM 21 C6 C A1952 98.426 110.974 106.403 1.00 49.58 C
ATOM 22 P A A1953 101.491 106.629 104.893 1.00 61.21 P
ATOM 23 OP1 A A1953 100.302 106.430 104.016 1.00 59.71 O
ATOM 24 OP2 A A1953 102.562 105.590 104.938 1.00 60.60 O
ATOM 25 O5' A A1953 102.169 108.004 104.475 1.00 58.84 O
TER

ATOM 1 O3' U B1926 98.654 117.235 103.412 1.00 47.85 O
ATOM 2 P A B1927 97.399 116.484 104.077 1.00 48.66 P
ATOM 3 OP1 A B1927 97.580 115.037 103.805 1.00 49.02 O
ATOM 4 OP2 A B1927 96.144 117.164 103.656 1.00 47.27 O
ATOM 5 O5' A B1927 97.591 116.714 105.635 1.00 48.34 O
ATOM 6 C5' A B1927 98.746 116.207 106.304 1.00 50.65 C
ATOM 7 C4' A B1927 98.346 115.551 107.597 1.00 52.21 C
ATOM 8 O4' A B1927 99.537 115.013 108.232 1.00 52.94 O
ATOM 9 C3' A B1927 97.703 116.484 108.614 1.00 52.20 C
ATOM 10 O3' A B1927 96.782 115.745 109.404 1.00 52.89 O
ATOM 11 C2' A B1927 98.894 116.908 109.462 1.00 52.82 C
ATOM 12 O2' A B1927 98.508 117.304 110.760 1.00 54.99 O
ATOM 13 C1' A B1927 99.723 115.622 109.490 1.00 53.49 C
ATOM 14 N9 A B1927 101.157 115.850 109.666 1.00 55.54 N
ATOM 15 C8 A B1927 102.005 116.552 108.843 1.00 55.87 C
ATOM 16 N7 A B1927 103.239 116.609 109.279 1.00 56.63 N
ATOM 17 C5 A B1927 103.209 115.889 110.463 1.00 57.23 C
ATOM 18 C6 A B1927 104.202 115.582 111.406 1.00 57.73 C
ATOM 19 N6 A B1927 105.468 115.984 111.299 1.00 58.67 N
ATOM 20 N1 A B1927 103.846 114.841 112.478 1.00 58.58 N
ATOM 21 C2 A B1927 102.571 114.442 112.586 1.00 58.62 C
ATOM 22 N3 A B1927 101.544 114.669 111.768 1.00 58.11 N
ATOM 23 C4 A B1927 101.934 115.407 110.712 1.00 57.40 C
ATOM 24 P C B1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 25 OP1 C B1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 26 OP2 C B1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 27 O5' C B1928 94.550 114.629 109.537 1.00 52.42 O
TER

Atoms:
C2: (96.281,109.986,106.830)
OP1: (101.308,113.024,107.119)
OP2: (101.905,112.027,109.403)
C4: (96.437,111.932,105.566)
O5': (101.802,110.592,107.369)
C3': (100.262,108.058,106.720)
C1': (98.305,108.897,107.741)
O4': (99.438,109.403,108.428)
C5': (101.858,109.435,108.234)
P: (102.090,112.058,107.930)
O2: (95.616,109.077,107.358)
C4': (100.600,108.598,108.099)
C2': (98.777,107.742,106.858)
O2': (98.513,106.521,107.517)
N1: (97.675,109.985,106.974)
N3: (95.692,110.974,106.120)
N4: (95.815,112.883,104.876)
C6: (98.426,110.974,106.403)
C5: (97.854,111.956,105.697)
O3': (101.012,106.891,106.409)
OP1: (97.580,115.037,103.805)
OP2: (96.144,117.164,103.656)
C3': (97.703,116.484,108.614)
C1': (99.723,115.622,109.490)
C5': (98.746,116.207,106.304)
O4': (99.537,115.013,108.232)
C8: (102.005,116.552,108.843)
O2': (98.508,117.304,110.760)
C6: (104.202,115.582,111.406)
C5: (103.209,115.889,110.463)
C4: (101.934,115.407,110.712)
P: (97.399,116.484,104.077)
C4': (98.346,115.551,107.597)
C2': (98.894,116.908,109.462)
C2: (102.571,114.442,112.586)
N1: (103.846,114.841,112.478)
N3: (101.544,114.669,111.768)
N6: (105.468,115.984,111.299)
N7: (103.239,116.609,109.279)
N9: (101.157,115.850,109.666)
O5': (97.591,116.714,105.635)
O3': (96.782,115.745,109.404)
Image (generated by PyMOL):
PyMOL image
show in jmol