Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1R3E:C11:C9
Extra
PDB:
ATOM 1 O3' U A 10 45.338 -11.319 16.079 1.00 35.87 O
ATOM 2 P C A 11 43.760 -11.199 15.819 1.00 30.40 P
ATOM 3 OP1 C A 11 43.252 -12.372 15.076 1.00 33.34 O
ATOM 4 OP2 C A 11 43.587 -9.844 15.246 1.00 27.83 O
ATOM 5 O5' C A 11 43.115 -11.198 17.281 1.00 29.52 O
ATOM 6 C5' C A 11 43.008 -12.384 18.079 1.00 30.70 C
ATOM 7 C4' C A 11 42.211 -12.068 19.323 1.00 27.80 C
ATOM 8 O4' C A 11 42.863 -10.989 20.019 1.00 39.19 O
ATOM 9 C3' C A 11 40.781 -11.592 19.030 1.00 36.14 C
ATOM 10 O3' C A 11 39.891 -12.508 19.671 1.00 30.46 O
ATOM 11 C2' C A 11 40.590 -10.314 19.854 1.00 34.68 C
ATOM 12 O2' C A 11 39.491 -10.387 20.733 1.00 58.12 O
ATOM 13 C1' C A 11 41.878 -10.254 20.678 1.00 36.83 C
ATOM 14 N1 C A 11 42.369 -8.936 21.069 1.00 29.84 N
ATOM 15 C2 C A 11 42.317 -8.627 22.416 1.00 22.43 C
ATOM 16 O2 C A 11 41.949 -9.497 23.194 1.00 33.29 O
ATOM 17 N3 C A 11 42.663 -7.395 22.837 1.00 26.18 N
ATOM 18 C4 C A 11 43.058 -6.484 21.953 1.00 21.87 C
ATOM 19 N4 C A 11 43.354 -5.277 22.409 1.00 18.22 N
ATOM 20 C5 C A 11 43.162 -6.780 20.558 1.00 23.13 C
ATOM 21 C6 C A 11 42.821 -8.019 20.164 1.00 24.04 C
ATOM 22 P C A 12 39.073 -13.600 18.844 1.00 31.67 P
ATOM 23 OP1 C A 12 38.317 -14.310 19.901 1.00 33.44 O
ATOM 24 OP2 C A 12 39.955 -14.368 17.946 1.00 35.64 O
ATOM 25 O5' C A 12 38.018 -12.757 18.013 1.00 33.87 O
TER
ATOM 1 O3' G B 8 44.448 -1.261 19.532 1.00 29.18 O
ATOM 2 P A B 9 43.361 -2.354 19.953 1.00 25.30 P
ATOM 3 OP1 A B 9 42.431 -1.736 20.938 1.00 26.20 O
ATOM 4 OP2 A B 9 44.054 -3.610 20.294 1.00 26.85 O
ATOM 5 O5' A B 9 42.553 -2.599 18.608 1.00 30.14 O
ATOM 6 C5' A B 9 43.193 -3.132 17.472 1.00 27.04 C
ATOM 7 C4' A B 9 42.983 -4.617 17.420 1.00 29.13 C
ATOM 8 O4' A B 9 41.574 -4.904 17.498 1.00 29.93 O
ATOM 9 C3' A B 9 43.429 -5.292 16.136 1.00 28.34 C
ATOM 10 O3' A B 9 44.822 -5.534 16.290 1.00 36.88 O
ATOM 11 C2' A B 9 42.593 -6.573 16.126 1.00 30.00 C
ATOM 12 O2' A B 9 43.200 -7.629 16.842 1.00 28.10 O
ATOM 13 C1' A B 9 41.319 -6.144 16.872 1.00 26.15 C
ATOM 14 N9 A B 9 40.120 -5.983 16.057 1.00 28.87 N
ATOM 15 C8 A B 9 40.008 -5.500 14.783 1.00 24.23 C
ATOM 16 N7 A B 9 38.767 -5.416 14.357 1.00 32.72 N
ATOM 17 C5 A B 9 38.017 -5.901 15.418 1.00 27.73 C
ATOM 18 C6 A B 9 36.634 -6.076 15.597 1.00 30.13 C
ATOM 19 N6 A B 9 35.727 -5.780 14.665 1.00 22.02 N
ATOM 20 N1 A B 9 36.210 -6.575 16.780 1.00 25.79 N
ATOM 21 C2 A B 9 37.129 -6.882 17.709 1.00 34.05 C
ATOM 22 N3 A B 9 38.455 -6.771 17.652 1.00 24.86 N
ATOM 23 C4 A B 9 38.838 -6.267 16.467 1.00 28.46 C
ATOM 24 P U B 10 45.686 -6.135 15.083 1.00 33.67 P
ATOM 25 OP1 U B 10 46.752 -5.158 14.816 1.00 47.72 O
ATOM 26 OP2 U B 10 44.842 -6.607 13.960 1.00 32.63 O
ATOM 27 O5' U B 10 46.333 -7.418 15.786 1.00 44.00 O
TER
ATOM 2 P C A 11 43.760 -11.199 15.819 1.00 30.40 P
ATOM 3 OP1 C A 11 43.252 -12.372 15.076 1.00 33.34 O
ATOM 4 OP2 C A 11 43.587 -9.844 15.246 1.00 27.83 O
ATOM 5 O5' C A 11 43.115 -11.198 17.281 1.00 29.52 O
ATOM 6 C5' C A 11 43.008 -12.384 18.079 1.00 30.70 C
ATOM 7 C4' C A 11 42.211 -12.068 19.323 1.00 27.80 C
ATOM 8 O4' C A 11 42.863 -10.989 20.019 1.00 39.19 O
ATOM 9 C3' C A 11 40.781 -11.592 19.030 1.00 36.14 C
ATOM 10 O3' C A 11 39.891 -12.508 19.671 1.00 30.46 O
ATOM 11 C2' C A 11 40.590 -10.314 19.854 1.00 34.68 C
ATOM 12 O2' C A 11 39.491 -10.387 20.733 1.00 58.12 O
ATOM 13 C1' C A 11 41.878 -10.254 20.678 1.00 36.83 C
ATOM 14 N1 C A 11 42.369 -8.936 21.069 1.00 29.84 N
ATOM 15 C2 C A 11 42.317 -8.627 22.416 1.00 22.43 C
ATOM 16 O2 C A 11 41.949 -9.497 23.194 1.00 33.29 O
ATOM 17 N3 C A 11 42.663 -7.395 22.837 1.00 26.18 N
ATOM 18 C4 C A 11 43.058 -6.484 21.953 1.00 21.87 C
ATOM 19 N4 C A 11 43.354 -5.277 22.409 1.00 18.22 N
ATOM 20 C5 C A 11 43.162 -6.780 20.558 1.00 23.13 C
ATOM 21 C6 C A 11 42.821 -8.019 20.164 1.00 24.04 C
ATOM 22 P C A 12 39.073 -13.600 18.844 1.00 31.67 P
ATOM 23 OP1 C A 12 38.317 -14.310 19.901 1.00 33.44 O
ATOM 24 OP2 C A 12 39.955 -14.368 17.946 1.00 35.64 O
ATOM 25 O5' C A 12 38.018 -12.757 18.013 1.00 33.87 O
TER
ATOM 1 O3' G B 8 44.448 -1.261 19.532 1.00 29.18 O
ATOM 2 P A B 9 43.361 -2.354 19.953 1.00 25.30 P
ATOM 3 OP1 A B 9 42.431 -1.736 20.938 1.00 26.20 O
ATOM 4 OP2 A B 9 44.054 -3.610 20.294 1.00 26.85 O
ATOM 5 O5' A B 9 42.553 -2.599 18.608 1.00 30.14 O
ATOM 6 C5' A B 9 43.193 -3.132 17.472 1.00 27.04 C
ATOM 7 C4' A B 9 42.983 -4.617 17.420 1.00 29.13 C
ATOM 8 O4' A B 9 41.574 -4.904 17.498 1.00 29.93 O
ATOM 9 C3' A B 9 43.429 -5.292 16.136 1.00 28.34 C
ATOM 10 O3' A B 9 44.822 -5.534 16.290 1.00 36.88 O
ATOM 11 C2' A B 9 42.593 -6.573 16.126 1.00 30.00 C
ATOM 12 O2' A B 9 43.200 -7.629 16.842 1.00 28.10 O
ATOM 13 C1' A B 9 41.319 -6.144 16.872 1.00 26.15 C
ATOM 14 N9 A B 9 40.120 -5.983 16.057 1.00 28.87 N
ATOM 15 C8 A B 9 40.008 -5.500 14.783 1.00 24.23 C
ATOM 16 N7 A B 9 38.767 -5.416 14.357 1.00 32.72 N
ATOM 17 C5 A B 9 38.017 -5.901 15.418 1.00 27.73 C
ATOM 18 C6 A B 9 36.634 -6.076 15.597 1.00 30.13 C
ATOM 19 N6 A B 9 35.727 -5.780 14.665 1.00 22.02 N
ATOM 20 N1 A B 9 36.210 -6.575 16.780 1.00 25.79 N
ATOM 21 C2 A B 9 37.129 -6.882 17.709 1.00 34.05 C
ATOM 22 N3 A B 9 38.455 -6.771 17.652 1.00 24.86 N
ATOM 23 C4 A B 9 38.838 -6.267 16.467 1.00 28.46 C
ATOM 24 P U B 10 45.686 -6.135 15.083 1.00 33.67 P
ATOM 25 OP1 U B 10 46.752 -5.158 14.816 1.00 47.72 O
ATOM 26 OP2 U B 10 44.842 -6.607 13.960 1.00 32.63 O
ATOM 27 O5' U B 10 46.333 -7.418 15.786 1.00 44.00 O
TER
Atoms:
C2: (42.317,-8.627,22.416)
OP1: (43.252,-12.372,15.076)
OP2: (43.587,-9.844,15.246)
C4: (43.058,-6.484,21.953)
O5': (43.115,-11.198,17.281)
C3': (40.781,-11.592,19.030)
C1': (41.878,-10.254,20.678)
O4': (42.863,-10.989,20.019)
C5': (43.008,-12.384,18.079)
P: (43.760,-11.199,15.819)
O2: (41.949,-9.497,23.194)
C4': (42.211,-12.068,19.323)
C2': (40.590,-10.314,19.854)
O2': (39.491,-10.387,20.733)
N1: (42.369,-8.936,21.069)
N3: (42.663,-7.395,22.837)
N4: (43.354,-5.277,22.409)
C6: (42.821,-8.019,20.164)
C5: (43.162,-6.780,20.558)
O3': (39.891,-12.508,19.671)
OP1: (43.252,-12.372,15.076)
OP2: (43.587,-9.844,15.246)
C4: (43.058,-6.484,21.953)
O5': (43.115,-11.198,17.281)
C3': (40.781,-11.592,19.030)
C1': (41.878,-10.254,20.678)
O4': (42.863,-10.989,20.019)
C5': (43.008,-12.384,18.079)
P: (43.760,-11.199,15.819)
O2: (41.949,-9.497,23.194)
C4': (42.211,-12.068,19.323)
C2': (40.590,-10.314,19.854)
O2': (39.491,-10.387,20.733)
N1: (42.369,-8.936,21.069)
N3: (42.663,-7.395,22.837)
N4: (43.354,-5.277,22.409)
C6: (42.821,-8.019,20.164)
C5: (43.162,-6.780,20.558)
O3': (39.891,-12.508,19.671)
OP1: (42.431,-1.736,20.938)
OP2: (44.054,-3.610,20.294)
C3': (43.429,-5.292,16.136)
C1': (41.319,-6.144,16.872)
C5': (43.193,-3.132,17.472)
O4': (41.574,-4.904,17.498)
C8: (40.008,-5.500,14.783)
O2': (43.200,-7.629,16.842)
C6: (36.634,-6.076,15.597)
C5: (38.017,-5.901,15.418)
C4: (38.838,-6.267,16.467)
P: (43.361,-2.354,19.953)
C4': (42.983,-4.617,17.420)
C2': (42.593,-6.573,16.126)
C2: (37.129,-6.882,17.709)
N1: (36.210,-6.575,16.780)
N3: (38.455,-6.771,17.652)
N6: (35.727,-5.780,14.665)
N7: (38.767,-5.416,14.357)
N9: (40.120,-5.983,16.057)
O5': (42.553,-2.599,18.608)
O3': (44.822,-5.534,16.290)
OP2: (44.054,-3.610,20.294)
C3': (43.429,-5.292,16.136)
C1': (41.319,-6.144,16.872)
C5': (43.193,-3.132,17.472)
O4': (41.574,-4.904,17.498)
C8: (40.008,-5.500,14.783)
O2': (43.200,-7.629,16.842)
C6: (36.634,-6.076,15.597)
C5: (38.017,-5.901,15.418)
C4: (38.838,-6.267,16.467)
P: (43.361,-2.354,19.953)
C4': (42.983,-4.617,17.420)
C2': (42.593,-6.573,16.126)
C2: (37.129,-6.882,17.709)
N1: (36.210,-6.575,16.780)
N3: (38.455,-6.771,17.652)
N6: (35.727,-5.780,14.665)
N7: (38.767,-5.416,14.357)
N9: (40.120,-5.983,16.057)
O5': (42.553,-2.599,18.608)
O3': (44.822,-5.534,16.290)
Image (generated by PyMOL):