Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0967:0965
Extra
PDB:
ATOM 1 O3' A A 966 67.941 67.660 105.840 1.00 41.67 O
ATOM 2 P C A 967 68.428 66.533 106.887 1.00 41.37 P
ATOM 3 OP1 C A 967 69.022 67.172 108.083 1.00 42.32 O
ATOM 4 OP2 C A 967 69.226 65.552 106.112 1.00 45.09 O
ATOM 5 O5' C A 967 67.091 65.766 107.287 1.00 41.95 O
ATOM 6 C5' C A 967 66.502 65.930 108.570 1.00 37.67 C
ATOM 7 C4' C A 967 66.539 64.630 109.333 1.00 38.26 C
ATOM 8 O4' C A 967 66.583 64.956 110.742 1.00 39.57 O
ATOM 9 C3' C A 967 65.380 63.646 109.152 1.00 37.85 C
ATOM 10 O3' C A 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 11 C2' C A 967 65.343 62.947 110.507 1.00 38.20 C
ATOM 12 O2' C A 967 66.354 61.966 110.607 1.00 36.92 O
ATOM 13 C1' C A 967 65.736 64.083 111.455 1.00 38.62 C
ATOM 14 N1 C A 967 64.651 64.889 112.040 1.00 38.48 N
ATOM 15 C2 C A 967 63.931 64.367 113.107 1.00 40.14 C
ATOM 16 O2 C A 967 64.163 63.201 113.472 1.00 42.92 O
ATOM 17 N3 C A 967 62.998 65.141 113.715 1.00 39.85 N
ATOM 18 C4 C A 967 62.773 66.385 113.278 1.00 38.99 C
ATOM 19 N4 C A 967 61.874 67.130 113.927 1.00 36.72 N
ATOM 20 C5 C A 967 63.465 66.924 112.160 1.00 38.54 C
ATOM 21 C6 C A 967 64.381 66.147 111.573 1.00 37.89 C
ATOM 22 P U A 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 23 OP1 U A 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 24 OP2 U A 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 25 O5' U A 968 63.728 61.067 108.606 1.00 40.59 O
TER
ATOM 1 O3' A B 964 62.712 71.759 114.049 1.00 36.29 O
ATOM 2 P A B 965 61.433 71.380 113.152 1.00 38.61 P
ATOM 3 OP1 A B 965 60.354 72.373 113.442 1.00 35.72 O
ATOM 4 OP2 A B 965 61.150 69.928 113.300 1.00 37.89 O
ATOM 5 O5' A B 965 61.958 71.629 111.667 1.00 38.93 O
ATOM 6 C5' A B 965 62.442 72.926 111.266 1.00 37.10 C
ATOM 7 C4' A B 965 62.687 72.946 109.783 1.00 36.78 C
ATOM 8 O4' A B 965 62.872 74.301 109.327 1.00 37.37 O
ATOM 9 C3' A B 965 63.927 72.214 109.315 1.00 37.88 C
ATOM 10 O3' A B 965 63.599 70.834 109.207 1.00 38.35 O
ATOM 11 C2' A B 965 64.197 72.865 107.958 1.00 38.07 C
ATOM 12 O2' A B 965 63.387 72.329 106.928 1.00 37.88 O
ATOM 13 C1' A B 965 63.737 74.306 108.210 1.00 38.55 C
ATOM 14 N9 A B 965 64.747 75.346 108.421 1.00 40.14 N
ATOM 15 C8 A B 965 64.976 76.044 109.579 1.00 39.92 C
ATOM 16 N7 A B 965 65.883 76.979 109.463 1.00 41.04 N
ATOM 17 C5 A B 965 66.293 76.885 108.144 1.00 40.83 C
ATOM 18 C6 A B 965 67.217 77.626 107.389 1.00 40.22 C
ATOM 19 N6 A B 965 67.910 78.655 107.874 1.00 39.68 N
ATOM 20 N1 A B 965 67.397 77.276 106.098 1.00 40.14 N
ATOM 21 C2 A B 965 66.684 76.257 105.608 1.00 40.81 C
ATOM 22 N3 A B 965 65.774 75.494 106.213 1.00 41.11 N
ATOM 23 C4 A B 965 65.621 75.866 107.495 1.00 40.54 C
ATOM 24 P A B 966 64.714 69.711 109.457 1.00 37.87 P
ATOM 25 OP1 A B 966 63.961 68.429 109.414 1.00 38.48 O
ATOM 26 OP2 A B 966 65.534 70.043 110.653 1.00 35.81 O
ATOM 27 O5' A B 966 65.654 69.798 108.178 1.00 36.50 O
TER
ATOM 2 P C A 967 68.428 66.533 106.887 1.00 41.37 P
ATOM 3 OP1 C A 967 69.022 67.172 108.083 1.00 42.32 O
ATOM 4 OP2 C A 967 69.226 65.552 106.112 1.00 45.09 O
ATOM 5 O5' C A 967 67.091 65.766 107.287 1.00 41.95 O
ATOM 6 C5' C A 967 66.502 65.930 108.570 1.00 37.67 C
ATOM 7 C4' C A 967 66.539 64.630 109.333 1.00 38.26 C
ATOM 8 O4' C A 967 66.583 64.956 110.742 1.00 39.57 O
ATOM 9 C3' C A 967 65.380 63.646 109.152 1.00 37.85 C
ATOM 10 O3' C A 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 11 C2' C A 967 65.343 62.947 110.507 1.00 38.20 C
ATOM 12 O2' C A 967 66.354 61.966 110.607 1.00 36.92 O
ATOM 13 C1' C A 967 65.736 64.083 111.455 1.00 38.62 C
ATOM 14 N1 C A 967 64.651 64.889 112.040 1.00 38.48 N
ATOM 15 C2 C A 967 63.931 64.367 113.107 1.00 40.14 C
ATOM 16 O2 C A 967 64.163 63.201 113.472 1.00 42.92 O
ATOM 17 N3 C A 967 62.998 65.141 113.715 1.00 39.85 N
ATOM 18 C4 C A 967 62.773 66.385 113.278 1.00 38.99 C
ATOM 19 N4 C A 967 61.874 67.130 113.927 1.00 36.72 N
ATOM 20 C5 C A 967 63.465 66.924 112.160 1.00 38.54 C
ATOM 21 C6 C A 967 64.381 66.147 111.573 1.00 37.89 C
ATOM 22 P U A 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 23 OP1 U A 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 24 OP2 U A 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 25 O5' U A 968 63.728 61.067 108.606 1.00 40.59 O
TER
ATOM 1 O3' A B 964 62.712 71.759 114.049 1.00 36.29 O
ATOM 2 P A B 965 61.433 71.380 113.152 1.00 38.61 P
ATOM 3 OP1 A B 965 60.354 72.373 113.442 1.00 35.72 O
ATOM 4 OP2 A B 965 61.150 69.928 113.300 1.00 37.89 O
ATOM 5 O5' A B 965 61.958 71.629 111.667 1.00 38.93 O
ATOM 6 C5' A B 965 62.442 72.926 111.266 1.00 37.10 C
ATOM 7 C4' A B 965 62.687 72.946 109.783 1.00 36.78 C
ATOM 8 O4' A B 965 62.872 74.301 109.327 1.00 37.37 O
ATOM 9 C3' A B 965 63.927 72.214 109.315 1.00 37.88 C
ATOM 10 O3' A B 965 63.599 70.834 109.207 1.00 38.35 O
ATOM 11 C2' A B 965 64.197 72.865 107.958 1.00 38.07 C
ATOM 12 O2' A B 965 63.387 72.329 106.928 1.00 37.88 O
ATOM 13 C1' A B 965 63.737 74.306 108.210 1.00 38.55 C
ATOM 14 N9 A B 965 64.747 75.346 108.421 1.00 40.14 N
ATOM 15 C8 A B 965 64.976 76.044 109.579 1.00 39.92 C
ATOM 16 N7 A B 965 65.883 76.979 109.463 1.00 41.04 N
ATOM 17 C5 A B 965 66.293 76.885 108.144 1.00 40.83 C
ATOM 18 C6 A B 965 67.217 77.626 107.389 1.00 40.22 C
ATOM 19 N6 A B 965 67.910 78.655 107.874 1.00 39.68 N
ATOM 20 N1 A B 965 67.397 77.276 106.098 1.00 40.14 N
ATOM 21 C2 A B 965 66.684 76.257 105.608 1.00 40.81 C
ATOM 22 N3 A B 965 65.774 75.494 106.213 1.00 41.11 N
ATOM 23 C4 A B 965 65.621 75.866 107.495 1.00 40.54 C
ATOM 24 P A B 966 64.714 69.711 109.457 1.00 37.87 P
ATOM 25 OP1 A B 966 63.961 68.429 109.414 1.00 38.48 O
ATOM 26 OP2 A B 966 65.534 70.043 110.653 1.00 35.81 O
ATOM 27 O5' A B 966 65.654 69.798 108.178 1.00 36.50 O
TER
Atoms:
C2: (63.931,64.367,113.107)
OP1: (69.022,67.172,108.083)
OP2: (69.226,65.552,106.112)
C4: (62.773,66.385,113.278)
O5': (67.091,65.766,107.287)
C3': (65.380,63.646,109.152)
C1': (65.736,64.083,111.455)
O4': (66.583,64.956,110.742)
C5': (66.502,65.930,108.570)
P: (68.428,66.533,106.887)
O2: (64.163,63.201,113.472)
C4': (66.539,64.630,109.333)
C2': (65.343,62.947,110.507)
O2': (66.354,61.966,110.607)
N1: (64.651,64.889,112.040)
N3: (62.998,65.141,113.715)
N4: (61.874,67.130,113.927)
C6: (64.381,66.147,111.573)
C5: (63.465,66.924,112.160)
O3': (65.637,62.699,108.101)
OP1: (69.022,67.172,108.083)
OP2: (69.226,65.552,106.112)
C4: (62.773,66.385,113.278)
O5': (67.091,65.766,107.287)
C3': (65.380,63.646,109.152)
C1': (65.736,64.083,111.455)
O4': (66.583,64.956,110.742)
C5': (66.502,65.930,108.570)
P: (68.428,66.533,106.887)
O2: (64.163,63.201,113.472)
C4': (66.539,64.630,109.333)
C2': (65.343,62.947,110.507)
O2': (66.354,61.966,110.607)
N1: (64.651,64.889,112.040)
N3: (62.998,65.141,113.715)
N4: (61.874,67.130,113.927)
C6: (64.381,66.147,111.573)
C5: (63.465,66.924,112.160)
O3': (65.637,62.699,108.101)
OP1: (60.354,72.373,113.442)
OP2: (61.150,69.928,113.300)
C3': (63.927,72.214,109.315)
C1': (63.737,74.306,108.210)
C5': (62.442,72.926,111.266)
O4': (62.872,74.301,109.327)
C8: (64.976,76.044,109.579)
O2': (63.387,72.329,106.928)
C6: (67.217,77.626,107.389)
C5: (66.293,76.885,108.144)
C4: (65.621,75.866,107.495)
P: (61.433,71.380,113.152)
C4': (62.687,72.946,109.783)
C2': (64.197,72.865,107.958)
C2: (66.684,76.257,105.608)
N1: (67.397,77.276,106.098)
N3: (65.774,75.494,106.213)
N6: (67.910,78.655,107.874)
N7: (65.883,76.979,109.463)
N9: (64.747,75.346,108.421)
O5': (61.958,71.629,111.667)
O3': (63.599,70.834,109.207)
OP2: (61.150,69.928,113.300)
C3': (63.927,72.214,109.315)
C1': (63.737,74.306,108.210)
C5': (62.442,72.926,111.266)
O4': (62.872,74.301,109.327)
C8: (64.976,76.044,109.579)
O2': (63.387,72.329,106.928)
C6: (67.217,77.626,107.389)
C5: (66.293,76.885,108.144)
C4: (65.621,75.866,107.495)
P: (61.433,71.380,113.152)
C4': (62.687,72.946,109.783)
C2': (64.197,72.865,107.958)
C2: (66.684,76.257,105.608)
N1: (67.397,77.276,106.098)
N3: (65.774,75.494,106.213)
N6: (67.910,78.655,107.874)
N7: (65.883,76.979,109.463)
N9: (64.747,75.346,108.421)
O5': (61.958,71.629,111.667)
O3': (63.599,70.834,109.207)
Image (generated by PyMOL):