Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1H4S:T9:T5
Extra
PDB:
ATOM 1 O3' G A 8 -1.324 73.164 92.440 1.00 77.53 O
ATOM 2 P C A 9 -2.350 72.733 93.599 1.00 80.86 P
ATOM 3 OP1 C A 9 -3.725 73.048 93.139 1.00 82.76 O
ATOM 4 OP2 C A 9 -1.852 73.316 94.872 1.00 77.09 O
ATOM 5 O5' C A 9 -2.172 71.149 93.646 1.00 79.67 O
ATOM 6 C5' C A 9 -2.338 70.408 94.852 1.00 75.97 C
ATOM 7 C4' C A 9 -1.563 69.112 94.768 1.00 74.12 C
ATOM 8 O4' C A 9 -0.140 69.410 94.785 1.00 73.00 O
ATOM 9 C3' C A 9 -1.747 68.151 95.930 1.00 75.69 C
ATOM 10 O3' C A 9 -2.897 67.337 95.739 1.00 77.87 O
ATOM 11 C2' C A 9 -0.470 67.324 95.862 1.00 72.64 C
ATOM 12 O2' C A 9 -0.519 66.331 94.859 1.00 69.48 O
ATOM 13 C1' C A 9 0.556 68.395 95.492 1.00 68.96 C
ATOM 14 N1 C A 9 1.199 69.003 96.671 1.00 62.22 N
ATOM 15 C2 C A 9 2.048 68.213 97.452 1.00 60.08 C
ATOM 16 O2 C A 9 2.240 67.027 97.114 1.00 59.37 O
ATOM 17 N3 C A 9 2.636 68.757 98.550 1.00 54.99 N
ATOM 18 C4 C A 9 2.400 70.034 98.870 1.00 52.98 C
ATOM 19 N4 C A 9 2.988 70.529 99.964 1.00 50.73 N
ATOM 20 C5 C A 9 1.549 70.860 98.084 1.00 52.91 C
ATOM 21 C6 C A 9 0.974 70.310 97.004 1.00 58.80 C
ATOM 22 P A A 10 -3.828 66.974 96.995 1.00 79.25 P
ATOM 23 OP1 A A 10 -5.075 66.380 96.453 1.00 80.92 O
ATOM 24 OP2 A A 10 -3.903 68.184 97.854 1.00 80.58 O
ATOM 25 O5' A A 10 -3.022 65.829 97.761 1.00 78.59 O
TER
ATOM 1 O3' U B 4 4.112 74.154 103.513 1.00 75.05 O
ATOM 2 P A B 5 4.745 74.533 102.091 1.00 74.44 P
ATOM 3 OP1 A B 5 4.538 75.994 101.918 1.00 75.61 O
ATOM 4 OP2 A B 5 4.121 73.579 101.136 1.00 69.78 O
ATOM 5 O5' A B 5 6.312 74.212 102.210 1.00 64.31 O
ATOM 6 C5' A B 5 7.204 75.117 102.868 1.00 57.57 C
ATOM 7 C4' A B 5 8.448 75.376 102.028 1.00 57.40 C
ATOM 8 O4' A B 5 9.347 74.238 102.100 1.00 55.46 O
ATOM 9 C3' A B 5 8.082 75.532 100.554 1.00 59.95 C
ATOM 10 O3' A B 5 8.688 76.623 99.852 1.00 64.33 O
ATOM 11 C2' A B 5 8.366 74.176 99.909 1.00 57.46 C
ATOM 12 O2' A B 5 8.973 74.286 98.638 1.00 61.22 O
ATOM 13 C1' A B 5 9.437 73.618 100.839 1.00 56.37 C
ATOM 14 N9 A B 5 9.531 72.171 100.980 1.00 54.14 N
ATOM 15 C8 A B 5 8.754 71.199 100.402 1.00 56.55 C
ATOM 16 N7 A B 5 9.140 69.980 100.684 1.00 57.56 N
ATOM 17 C5 A B 5 10.236 70.163 101.514 1.00 52.85 C
ATOM 18 C6 A B 5 11.087 69.261 102.161 1.00 53.60 C
ATOM 19 N6 A B 5 10.965 67.936 102.064 1.00 58.25 N
ATOM 20 N1 A B 5 12.080 69.769 102.924 1.00 51.95 N
ATOM 21 C2 A B 5 12.195 71.098 103.021 1.00 51.32 C
ATOM 22 N3 A B 5 11.457 72.049 102.457 1.00 51.29 N
ATOM 23 C4 A B 5 10.483 71.507 101.710 1.00 50.43 C
ATOM 24 P G B 6 8.749 78.095 100.496 1.00 65.87 P
ATOM 25 OP1 G B 6 9.659 78.075 101.672 1.00 60.35 O
ATOM 26 OP2 G B 6 7.357 78.602 100.639 1.00 61.65 O
ATOM 27 O5' G B 6 9.496 78.921 99.357 1.00 69.17 O
TER
ATOM 2 P C A 9 -2.350 72.733 93.599 1.00 80.86 P
ATOM 3 OP1 C A 9 -3.725 73.048 93.139 1.00 82.76 O
ATOM 4 OP2 C A 9 -1.852 73.316 94.872 1.00 77.09 O
ATOM 5 O5' C A 9 -2.172 71.149 93.646 1.00 79.67 O
ATOM 6 C5' C A 9 -2.338 70.408 94.852 1.00 75.97 C
ATOM 7 C4' C A 9 -1.563 69.112 94.768 1.00 74.12 C
ATOM 8 O4' C A 9 -0.140 69.410 94.785 1.00 73.00 O
ATOM 9 C3' C A 9 -1.747 68.151 95.930 1.00 75.69 C
ATOM 10 O3' C A 9 -2.897 67.337 95.739 1.00 77.87 O
ATOM 11 C2' C A 9 -0.470 67.324 95.862 1.00 72.64 C
ATOM 12 O2' C A 9 -0.519 66.331 94.859 1.00 69.48 O
ATOM 13 C1' C A 9 0.556 68.395 95.492 1.00 68.96 C
ATOM 14 N1 C A 9 1.199 69.003 96.671 1.00 62.22 N
ATOM 15 C2 C A 9 2.048 68.213 97.452 1.00 60.08 C
ATOM 16 O2 C A 9 2.240 67.027 97.114 1.00 59.37 O
ATOM 17 N3 C A 9 2.636 68.757 98.550 1.00 54.99 N
ATOM 18 C4 C A 9 2.400 70.034 98.870 1.00 52.98 C
ATOM 19 N4 C A 9 2.988 70.529 99.964 1.00 50.73 N
ATOM 20 C5 C A 9 1.549 70.860 98.084 1.00 52.91 C
ATOM 21 C6 C A 9 0.974 70.310 97.004 1.00 58.80 C
ATOM 22 P A A 10 -3.828 66.974 96.995 1.00 79.25 P
ATOM 23 OP1 A A 10 -5.075 66.380 96.453 1.00 80.92 O
ATOM 24 OP2 A A 10 -3.903 68.184 97.854 1.00 80.58 O
ATOM 25 O5' A A 10 -3.022 65.829 97.761 1.00 78.59 O
TER
ATOM 1 O3' U B 4 4.112 74.154 103.513 1.00 75.05 O
ATOM 2 P A B 5 4.745 74.533 102.091 1.00 74.44 P
ATOM 3 OP1 A B 5 4.538 75.994 101.918 1.00 75.61 O
ATOM 4 OP2 A B 5 4.121 73.579 101.136 1.00 69.78 O
ATOM 5 O5' A B 5 6.312 74.212 102.210 1.00 64.31 O
ATOM 6 C5' A B 5 7.204 75.117 102.868 1.00 57.57 C
ATOM 7 C4' A B 5 8.448 75.376 102.028 1.00 57.40 C
ATOM 8 O4' A B 5 9.347 74.238 102.100 1.00 55.46 O
ATOM 9 C3' A B 5 8.082 75.532 100.554 1.00 59.95 C
ATOM 10 O3' A B 5 8.688 76.623 99.852 1.00 64.33 O
ATOM 11 C2' A B 5 8.366 74.176 99.909 1.00 57.46 C
ATOM 12 O2' A B 5 8.973 74.286 98.638 1.00 61.22 O
ATOM 13 C1' A B 5 9.437 73.618 100.839 1.00 56.37 C
ATOM 14 N9 A B 5 9.531 72.171 100.980 1.00 54.14 N
ATOM 15 C8 A B 5 8.754 71.199 100.402 1.00 56.55 C
ATOM 16 N7 A B 5 9.140 69.980 100.684 1.00 57.56 N
ATOM 17 C5 A B 5 10.236 70.163 101.514 1.00 52.85 C
ATOM 18 C6 A B 5 11.087 69.261 102.161 1.00 53.60 C
ATOM 19 N6 A B 5 10.965 67.936 102.064 1.00 58.25 N
ATOM 20 N1 A B 5 12.080 69.769 102.924 1.00 51.95 N
ATOM 21 C2 A B 5 12.195 71.098 103.021 1.00 51.32 C
ATOM 22 N3 A B 5 11.457 72.049 102.457 1.00 51.29 N
ATOM 23 C4 A B 5 10.483 71.507 101.710 1.00 50.43 C
ATOM 24 P G B 6 8.749 78.095 100.496 1.00 65.87 P
ATOM 25 OP1 G B 6 9.659 78.075 101.672 1.00 60.35 O
ATOM 26 OP2 G B 6 7.357 78.602 100.639 1.00 61.65 O
ATOM 27 O5' G B 6 9.496 78.921 99.357 1.00 69.17 O
TER
Atoms:
C2: (2.048,68.213,97.452)
OP1: (-3.725,73.048,93.139)
OP2: (-1.852,73.316,94.872)
C4: (2.400,70.034,98.870)
O5': (-2.172,71.149,93.646)
C3': (-1.747,68.151,95.930)
C1': (0.556,68.395,95.492)
O4': (-0.140,69.410,94.785)
C5': (-2.338,70.408,94.852)
P: (-2.350,72.733,93.599)
O2: (2.240,67.027,97.114)
C4': (-1.563,69.112,94.768)
C2': (-0.470,67.324,95.862)
O2': (-0.519,66.331,94.859)
N1: (1.199,69.003,96.671)
N3: (2.636,68.757,98.550)
N4: (2.988,70.529,99.964)
C6: (0.974,70.310,97.004)
C5: (1.549,70.860,98.084)
O3': (-2.897,67.337,95.739)
OP1: (-3.725,73.048,93.139)
OP2: (-1.852,73.316,94.872)
C4: (2.400,70.034,98.870)
O5': (-2.172,71.149,93.646)
C3': (-1.747,68.151,95.930)
C1': (0.556,68.395,95.492)
O4': (-0.140,69.410,94.785)
C5': (-2.338,70.408,94.852)
P: (-2.350,72.733,93.599)
O2: (2.240,67.027,97.114)
C4': (-1.563,69.112,94.768)
C2': (-0.470,67.324,95.862)
O2': (-0.519,66.331,94.859)
N1: (1.199,69.003,96.671)
N3: (2.636,68.757,98.550)
N4: (2.988,70.529,99.964)
C6: (0.974,70.310,97.004)
C5: (1.549,70.860,98.084)
O3': (-2.897,67.337,95.739)
OP1: (4.538,75.994,101.918)
OP2: (4.121,73.579,101.136)
C3': (8.082,75.532,100.554)
C1': (9.437,73.618,100.839)
C5': (7.204,75.117,102.868)
O4': (9.347,74.238,102.100)
C8: (8.754,71.199,100.402)
O2': (8.973,74.286,98.638)
C6: (11.087,69.261,102.161)
C5: (10.236,70.163,101.514)
C4: (10.483,71.507,101.710)
P: (4.745,74.533,102.091)
C4': (8.448,75.376,102.028)
C2': (8.366,74.176,99.909)
C2: (12.195,71.098,103.021)
N1: (12.080,69.769,102.924)
N3: (11.457,72.049,102.457)
N6: (10.965,67.936,102.064)
N7: (9.140,69.980,100.684)
N9: (9.531,72.171,100.980)
O5': (6.312,74.212,102.210)
O3': (8.688,76.623,99.852)
OP2: (4.121,73.579,101.136)
C3': (8.082,75.532,100.554)
C1': (9.437,73.618,100.839)
C5': (7.204,75.117,102.868)
O4': (9.347,74.238,102.100)
C8: (8.754,71.199,100.402)
O2': (8.973,74.286,98.638)
C6: (11.087,69.261,102.161)
C5: (10.236,70.163,101.514)
C4: (10.483,71.507,101.710)
P: (4.745,74.533,102.091)
C4': (8.448,75.376,102.028)
C2': (8.366,74.176,99.909)
C2: (12.195,71.098,103.021)
N1: (12.080,69.769,102.924)
N3: (11.457,72.049,102.457)
N6: (10.965,67.936,102.064)
N7: (9.140,69.980,100.684)
N9: (9.531,72.171,100.980)
O5': (6.312,74.212,102.210)
O3': (8.688,76.623,99.852)
Image (generated by PyMOL):