Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A65:A64
Extra
PDB:
ATOM 1 O3' A A 64 -8.599 -41.603 16.168 1.00 55.90 O
ATOM 2 P C A 65 -7.528 -41.749 17.361 1.00 54.70 P
ATOM 3 OP1 C A 65 -7.034 -40.412 17.765 1.00 54.60 O
ATOM 4 OP2 C A 65 -6.576 -42.831 17.024 1.00 54.66 O
ATOM 5 O5' C A 65 -8.495 -42.304 18.505 1.00 53.78 O
ATOM 6 C5' C A 65 -9.799 -41.753 18.667 1.00 51.88 C
ATOM 7 C4' C A 65 -10.841 -42.806 19.003 1.00 51.35 C
ATOM 8 O4' C A 65 -11.883 -42.743 18.000 1.00 51.53 O
ATOM 9 C3' C A 65 -10.381 -44.260 19.010 1.00 51.35 C
ATOM 10 O3' C A 65 -9.974 -44.640 20.315 1.00 51.09 O
ATOM 11 C2' C A 65 -11.640 -45.010 18.595 1.00 51.53 C
ATOM 12 O2' C A 65 -12.531 -45.239 19.668 1.00 51.56 O
ATOM 13 C1' C A 65 -12.267 -44.046 17.597 1.00 51.58 C
ATOM 14 N1 C A 65 -11.866 -44.295 16.162 1.00 51.86 N
ATOM 15 C2 C A 65 -12.242 -45.487 15.514 1.00 52.69 C
ATOM 16 O2 C A 65 -12.899 -46.342 16.120 1.00 53.41 O
ATOM 17 N3 C A 65 -11.870 -45.683 14.223 1.00 53.29 N
ATOM 18 C4 C A 65 -11.161 -44.753 13.581 1.00 53.09 C
ATOM 19 N4 C A 65 -10.822 -44.996 12.313 1.00 53.82 N
ATOM 20 C5 C A 65 -10.767 -43.536 14.216 1.00 52.25 C
ATOM 21 C6 C A 65 -11.139 -43.354 15.487 1.00 51.52 C
ATOM 22 P U A 66 -8.786 -45.683 20.556 1.00 51.57 P
ATOM 23 OP1 U A 66 -8.727 -45.964 22.007 1.00 51.46 O
ATOM 24 OP2 U A 66 -7.584 -45.184 19.852 1.00 51.68 O
ATOM 25 O5' U A 66 -9.274 -46.995 19.783 1.00 52.68 O
TER
ATOM 1 O3' A B 63 -10.073 -40.321 11.008 1.00 54.59 O
ATOM 2 P A B 64 -8.832 -41.326 11.106 1.00 55.51 P
ATOM 3 OP1 A B 64 -8.155 -41.310 9.792 1.00 56.94 O
ATOM 4 OP2 A B 64 -9.275 -42.625 11.668 1.00 54.93 O
ATOM 5 O5' A B 64 -7.879 -40.547 12.131 1.00 55.33 O
ATOM 6 C5' A B 64 -7.099 -41.215 13.122 1.00 55.59 C
ATOM 7 C4' A B 64 -7.216 -40.494 14.453 1.00 55.39 C
ATOM 8 O4' A B 64 -7.007 -39.074 14.256 1.00 55.57 O
ATOM 9 C3' A B 64 -8.594 -40.642 15.083 1.00 55.76 C
ATOM 10 O3' A B 64 -8.599 -41.603 16.168 1.00 55.90 O
ATOM 11 C2' A B 64 -9.050 -39.234 15.483 1.00 55.43 C
ATOM 12 O2' A B 64 -9.201 -39.066 16.878 1.00 55.72 O
ATOM 13 C1' A B 64 -7.958 -38.305 14.962 1.00 55.44 C
ATOM 14 N9 A B 64 -8.532 -37.299 14.075 1.00 56.05 N
ATOM 15 C8 A B 64 -9.135 -37.521 12.863 1.00 56.74 C
ATOM 16 N7 A B 64 -9.585 -36.435 12.279 1.00 57.06 N
ATOM 17 C5 A B 64 -9.257 -35.426 13.171 1.00 56.96 C
ATOM 18 C6 A B 64 -9.463 -34.028 13.141 1.00 57.31 C
ATOM 19 N6 A B 64 -10.071 -33.404 12.126 1.00 58.03 N
ATOM 20 N1 A B 64 -9.015 -33.298 14.190 1.00 56.87 N
ATOM 21 C2 A B 64 -8.404 -33.934 15.203 1.00 56.45 C
ATOM 22 N3 A B 64 -8.154 -35.241 15.343 1.00 55.88 N
ATOM 23 C4 A B 64 -8.610 -35.940 14.287 1.00 56.17 C
ATOM 24 P C B 65 -7.528 -41.749 17.361 1.00 54.70 P
ATOM 25 OP1 C B 65 -7.034 -40.412 17.765 1.00 54.60 O
ATOM 26 OP2 C B 65 -6.576 -42.831 17.024 1.00 54.66 O
ATOM 27 O5' C B 65 -8.495 -42.304 18.505 1.00 53.78 O
TER
ATOM 2 P C A 65 -7.528 -41.749 17.361 1.00 54.70 P
ATOM 3 OP1 C A 65 -7.034 -40.412 17.765 1.00 54.60 O
ATOM 4 OP2 C A 65 -6.576 -42.831 17.024 1.00 54.66 O
ATOM 5 O5' C A 65 -8.495 -42.304 18.505 1.00 53.78 O
ATOM 6 C5' C A 65 -9.799 -41.753 18.667 1.00 51.88 C
ATOM 7 C4' C A 65 -10.841 -42.806 19.003 1.00 51.35 C
ATOM 8 O4' C A 65 -11.883 -42.743 18.000 1.00 51.53 O
ATOM 9 C3' C A 65 -10.381 -44.260 19.010 1.00 51.35 C
ATOM 10 O3' C A 65 -9.974 -44.640 20.315 1.00 51.09 O
ATOM 11 C2' C A 65 -11.640 -45.010 18.595 1.00 51.53 C
ATOM 12 O2' C A 65 -12.531 -45.239 19.668 1.00 51.56 O
ATOM 13 C1' C A 65 -12.267 -44.046 17.597 1.00 51.58 C
ATOM 14 N1 C A 65 -11.866 -44.295 16.162 1.00 51.86 N
ATOM 15 C2 C A 65 -12.242 -45.487 15.514 1.00 52.69 C
ATOM 16 O2 C A 65 -12.899 -46.342 16.120 1.00 53.41 O
ATOM 17 N3 C A 65 -11.870 -45.683 14.223 1.00 53.29 N
ATOM 18 C4 C A 65 -11.161 -44.753 13.581 1.00 53.09 C
ATOM 19 N4 C A 65 -10.822 -44.996 12.313 1.00 53.82 N
ATOM 20 C5 C A 65 -10.767 -43.536 14.216 1.00 52.25 C
ATOM 21 C6 C A 65 -11.139 -43.354 15.487 1.00 51.52 C
ATOM 22 P U A 66 -8.786 -45.683 20.556 1.00 51.57 P
ATOM 23 OP1 U A 66 -8.727 -45.964 22.007 1.00 51.46 O
ATOM 24 OP2 U A 66 -7.584 -45.184 19.852 1.00 51.68 O
ATOM 25 O5' U A 66 -9.274 -46.995 19.783 1.00 52.68 O
TER
ATOM 1 O3' A B 63 -10.073 -40.321 11.008 1.00 54.59 O
ATOM 2 P A B 64 -8.832 -41.326 11.106 1.00 55.51 P
ATOM 3 OP1 A B 64 -8.155 -41.310 9.792 1.00 56.94 O
ATOM 4 OP2 A B 64 -9.275 -42.625 11.668 1.00 54.93 O
ATOM 5 O5' A B 64 -7.879 -40.547 12.131 1.00 55.33 O
ATOM 6 C5' A B 64 -7.099 -41.215 13.122 1.00 55.59 C
ATOM 7 C4' A B 64 -7.216 -40.494 14.453 1.00 55.39 C
ATOM 8 O4' A B 64 -7.007 -39.074 14.256 1.00 55.57 O
ATOM 9 C3' A B 64 -8.594 -40.642 15.083 1.00 55.76 C
ATOM 10 O3' A B 64 -8.599 -41.603 16.168 1.00 55.90 O
ATOM 11 C2' A B 64 -9.050 -39.234 15.483 1.00 55.43 C
ATOM 12 O2' A B 64 -9.201 -39.066 16.878 1.00 55.72 O
ATOM 13 C1' A B 64 -7.958 -38.305 14.962 1.00 55.44 C
ATOM 14 N9 A B 64 -8.532 -37.299 14.075 1.00 56.05 N
ATOM 15 C8 A B 64 -9.135 -37.521 12.863 1.00 56.74 C
ATOM 16 N7 A B 64 -9.585 -36.435 12.279 1.00 57.06 N
ATOM 17 C5 A B 64 -9.257 -35.426 13.171 1.00 56.96 C
ATOM 18 C6 A B 64 -9.463 -34.028 13.141 1.00 57.31 C
ATOM 19 N6 A B 64 -10.071 -33.404 12.126 1.00 58.03 N
ATOM 20 N1 A B 64 -9.015 -33.298 14.190 1.00 56.87 N
ATOM 21 C2 A B 64 -8.404 -33.934 15.203 1.00 56.45 C
ATOM 22 N3 A B 64 -8.154 -35.241 15.343 1.00 55.88 N
ATOM 23 C4 A B 64 -8.610 -35.940 14.287 1.00 56.17 C
ATOM 24 P C B 65 -7.528 -41.749 17.361 1.00 54.70 P
ATOM 25 OP1 C B 65 -7.034 -40.412 17.765 1.00 54.60 O
ATOM 26 OP2 C B 65 -6.576 -42.831 17.024 1.00 54.66 O
ATOM 27 O5' C B 65 -8.495 -42.304 18.505 1.00 53.78 O
TER
Atoms:
C2: (-12.242,-45.487,15.514)
OP1: (-7.034,-40.412,17.765)
OP2: (-6.576,-42.831,17.024)
C4: (-11.161,-44.753,13.581)
O5': (-8.495,-42.304,18.505)
C3': (-10.381,-44.260,19.010)
C1': (-12.267,-44.046,17.597)
O4': (-11.883,-42.743,18.000)
C5': (-9.799,-41.753,18.667)
P: (-7.528,-41.749,17.361)
O2: (-12.899,-46.342,16.120)
C4': (-10.841,-42.806,19.003)
C2': (-11.640,-45.010,18.595)
O2': (-12.531,-45.239,19.668)
N1: (-11.866,-44.295,16.162)
N3: (-11.870,-45.683,14.223)
N4: (-10.822,-44.996,12.313)
C6: (-11.139,-43.354,15.487)
C5: (-10.767,-43.536,14.216)
O3': (-9.974,-44.640,20.315)
OP1: (-7.034,-40.412,17.765)
OP2: (-6.576,-42.831,17.024)
C4: (-11.161,-44.753,13.581)
O5': (-8.495,-42.304,18.505)
C3': (-10.381,-44.260,19.010)
C1': (-12.267,-44.046,17.597)
O4': (-11.883,-42.743,18.000)
C5': (-9.799,-41.753,18.667)
P: (-7.528,-41.749,17.361)
O2: (-12.899,-46.342,16.120)
C4': (-10.841,-42.806,19.003)
C2': (-11.640,-45.010,18.595)
O2': (-12.531,-45.239,19.668)
N1: (-11.866,-44.295,16.162)
N3: (-11.870,-45.683,14.223)
N4: (-10.822,-44.996,12.313)
C6: (-11.139,-43.354,15.487)
C5: (-10.767,-43.536,14.216)
O3': (-9.974,-44.640,20.315)
OP1: (-8.155,-41.310,9.792)
OP2: (-9.275,-42.625,11.668)
C3': (-8.594,-40.642,15.083)
C1': (-7.958,-38.305,14.962)
C5': (-7.099,-41.215,13.122)
O4': (-7.007,-39.074,14.256)
C8: (-9.135,-37.521,12.863)
O2': (-9.201,-39.066,16.878)
C6: (-9.463,-34.028,13.141)
C5: (-9.257,-35.426,13.171)
C4: (-8.610,-35.940,14.287)
P: (-8.832,-41.326,11.106)
C4': (-7.216,-40.494,14.453)
C2': (-9.050,-39.234,15.483)
C2: (-8.404,-33.934,15.203)
N1: (-9.015,-33.298,14.190)
N3: (-8.154,-35.241,15.343)
N6: (-10.071,-33.404,12.126)
N7: (-9.585,-36.435,12.279)
N9: (-8.532,-37.299,14.075)
O5': (-7.879,-40.547,12.131)
O3': (-8.599,-41.603,16.168)
OP2: (-9.275,-42.625,11.668)
C3': (-8.594,-40.642,15.083)
C1': (-7.958,-38.305,14.962)
C5': (-7.099,-41.215,13.122)
O4': (-7.007,-39.074,14.256)
C8: (-9.135,-37.521,12.863)
O2': (-9.201,-39.066,16.878)
C6: (-9.463,-34.028,13.141)
C5: (-9.257,-35.426,13.171)
C4: (-8.610,-35.940,14.287)
P: (-8.832,-41.326,11.106)
C4': (-7.216,-40.494,14.453)
C2': (-9.050,-39.234,15.483)
C2: (-8.404,-33.934,15.203)
N1: (-9.015,-33.298,14.190)
N3: (-8.154,-35.241,15.343)
N6: (-10.071,-33.404,12.126)
N7: (-9.585,-36.435,12.279)
N9: (-8.532,-37.299,14.075)
O5': (-7.879,-40.547,12.131)
O3': (-8.599,-41.603,16.168)
Image (generated by PyMOL):