Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1I9V:A12:A8
Extra
PDB:
ATOM 1 O3' U A 11 10.064 9.172 2.453 1.00 41.36 O
ATOM 2 P C A 12 10.364 8.308 1.088 1.00 35.38 P
ATOM 3 OP1 C A 12 10.075 8.877 -0.257 1.00 38.37 O
ATOM 4 OP2 C A 12 9.682 7.047 1.479 1.00 34.87 O
ATOM 5 O5' C A 12 11.972 8.158 1.191 1.00 38.22 O
ATOM 6 C5' C A 12 12.788 7.287 0.358 1.00 32.36 C
ATOM 7 C4' C A 12 14.079 6.967 1.099 1.00 31.27 C
ATOM 8 O4' C A 12 13.714 6.330 2.353 1.00 30.85 O
ATOM 9 C3' C A 12 15.054 5.956 0.517 1.00 31.75 C
ATOM 10 O3' C A 12 15.937 6.523 -0.436 1.00 34.16 O
ATOM 11 C2' C A 12 15.857 5.539 1.740 1.00 29.73 C
ATOM 12 O2' C A 12 16.833 6.485 2.080 1.00 31.01 O
ATOM 13 C1' C A 12 14.801 5.552 2.841 1.00 28.07 C
ATOM 14 N1 C A 12 14.298 4.222 3.276 1.00 25.95 N
ATOM 15 C2 C A 12 15.164 3.334 3.959 1.00 22.65 C
ATOM 16 O2 C A 12 16.320 3.665 4.164 1.00 26.79 O
ATOM 17 N3 C A 12 14.707 2.137 4.359 1.00 20.62 N
ATOM 18 C4 C A 12 13.448 1.779 4.078 1.00 21.62 C
ATOM 19 N4 C A 12 13.053 0.547 4.420 1.00 20.11 N
ATOM 20 C5 C A 12 12.538 2.654 3.411 1.00 21.88 C
ATOM 21 C6 C A 12 13.001 3.853 3.026 1.00 25.06 C
ATOM 22 P A A 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 23 OP1 A A 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 24 OP2 A A 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 25 O5' A A 13 17.806 4.860 -0.823 1.00 35.55 O
TER
ATOM 1 O3' U B 7 10.387 -3.505 3.936 1.00 33.14 O
ATOM 2 P A B 8 9.877 -2.352 4.991 1.00 24.19 P
ATOM 3 OP1 A B 8 8.406 -2.439 5.189 1.00 28.19 O
ATOM 4 OP2 A B 8 10.468 -1.046 4.578 1.00 24.97 O
ATOM 5 O5' A B 8 10.492 -2.758 6.406 1.00 25.32 O
ATOM 6 C5' A B 8 9.985 -3.882 7.114 1.00 24.42 C
ATOM 7 C4' A B 8 9.920 -3.610 8.600 1.00 24.76 C
ATOM 8 O4' A B 8 11.274 -3.464 9.135 1.00 24.36 O
ATOM 9 C3' A B 8 9.153 -2.358 9.029 1.00 25.98 C
ATOM 10 O3' A B 8 8.466 -2.625 10.272 1.00 28.36 O
ATOM 11 C2' A B 8 10.293 -1.349 9.235 1.00 24.41 C
ATOM 12 O2' A B 8 9.988 -0.348 10.175 1.00 26.35 O
ATOM 13 C1' A B 8 11.378 -2.241 9.827 1.00 22.04 C
ATOM 14 N9 A B 8 12.748 -1.752 9.708 1.00 20.51 N
ATOM 15 C8 A B 8 13.233 -0.699 8.977 1.00 19.68 C
ATOM 16 N7 A B 8 14.523 -0.527 9.093 1.00 19.69 N
ATOM 17 C5 A B 8 14.918 -1.537 9.959 1.00 19.71 C
ATOM 18 C6 A B 8 16.165 -1.903 10.477 1.00 20.98 C
ATOM 19 N6 A B 8 17.311 -1.239 10.231 1.00 22.42 N
ATOM 20 N1 A B 8 16.213 -2.983 11.291 1.00 23.68 N
ATOM 21 C2 A B 8 15.079 -3.616 11.587 1.00 20.63 C
ATOM 22 N3 A B 8 13.848 -3.351 11.183 1.00 22.50 N
ATOM 23 C4 A B 8 13.837 -2.293 10.349 1.00 20.39 C
ATOM 24 P G B 9 6.892 -3.000 10.275 1.00 30.05 P
ATOM 25 OP1 G B 9 6.495 -3.330 11.670 1.00 29.78 O
ATOM 26 OP2 G B 9 6.659 -3.978 9.183 1.00 32.02 O
ATOM 27 O5' G B 9 6.162 -1.651 9.849 1.00 31.60 O
TER
ATOM 2 P C A 12 10.364 8.308 1.088 1.00 35.38 P
ATOM 3 OP1 C A 12 10.075 8.877 -0.257 1.00 38.37 O
ATOM 4 OP2 C A 12 9.682 7.047 1.479 1.00 34.87 O
ATOM 5 O5' C A 12 11.972 8.158 1.191 1.00 38.22 O
ATOM 6 C5' C A 12 12.788 7.287 0.358 1.00 32.36 C
ATOM 7 C4' C A 12 14.079 6.967 1.099 1.00 31.27 C
ATOM 8 O4' C A 12 13.714 6.330 2.353 1.00 30.85 O
ATOM 9 C3' C A 12 15.054 5.956 0.517 1.00 31.75 C
ATOM 10 O3' C A 12 15.937 6.523 -0.436 1.00 34.16 O
ATOM 11 C2' C A 12 15.857 5.539 1.740 1.00 29.73 C
ATOM 12 O2' C A 12 16.833 6.485 2.080 1.00 31.01 O
ATOM 13 C1' C A 12 14.801 5.552 2.841 1.00 28.07 C
ATOM 14 N1 C A 12 14.298 4.222 3.276 1.00 25.95 N
ATOM 15 C2 C A 12 15.164 3.334 3.959 1.00 22.65 C
ATOM 16 O2 C A 12 16.320 3.665 4.164 1.00 26.79 O
ATOM 17 N3 C A 12 14.707 2.137 4.359 1.00 20.62 N
ATOM 18 C4 C A 12 13.448 1.779 4.078 1.00 21.62 C
ATOM 19 N4 C A 12 13.053 0.547 4.420 1.00 20.11 N
ATOM 20 C5 C A 12 12.538 2.654 3.411 1.00 21.88 C
ATOM 21 C6 C A 12 13.001 3.853 3.026 1.00 25.06 C
ATOM 22 P A A 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 23 OP1 A A 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 24 OP2 A A 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 25 O5' A A 13 17.806 4.860 -0.823 1.00 35.55 O
TER
ATOM 1 O3' U B 7 10.387 -3.505 3.936 1.00 33.14 O
ATOM 2 P A B 8 9.877 -2.352 4.991 1.00 24.19 P
ATOM 3 OP1 A B 8 8.406 -2.439 5.189 1.00 28.19 O
ATOM 4 OP2 A B 8 10.468 -1.046 4.578 1.00 24.97 O
ATOM 5 O5' A B 8 10.492 -2.758 6.406 1.00 25.32 O
ATOM 6 C5' A B 8 9.985 -3.882 7.114 1.00 24.42 C
ATOM 7 C4' A B 8 9.920 -3.610 8.600 1.00 24.76 C
ATOM 8 O4' A B 8 11.274 -3.464 9.135 1.00 24.36 O
ATOM 9 C3' A B 8 9.153 -2.358 9.029 1.00 25.98 C
ATOM 10 O3' A B 8 8.466 -2.625 10.272 1.00 28.36 O
ATOM 11 C2' A B 8 10.293 -1.349 9.235 1.00 24.41 C
ATOM 12 O2' A B 8 9.988 -0.348 10.175 1.00 26.35 O
ATOM 13 C1' A B 8 11.378 -2.241 9.827 1.00 22.04 C
ATOM 14 N9 A B 8 12.748 -1.752 9.708 1.00 20.51 N
ATOM 15 C8 A B 8 13.233 -0.699 8.977 1.00 19.68 C
ATOM 16 N7 A B 8 14.523 -0.527 9.093 1.00 19.69 N
ATOM 17 C5 A B 8 14.918 -1.537 9.959 1.00 19.71 C
ATOM 18 C6 A B 8 16.165 -1.903 10.477 1.00 20.98 C
ATOM 19 N6 A B 8 17.311 -1.239 10.231 1.00 22.42 N
ATOM 20 N1 A B 8 16.213 -2.983 11.291 1.00 23.68 N
ATOM 21 C2 A B 8 15.079 -3.616 11.587 1.00 20.63 C
ATOM 22 N3 A B 8 13.848 -3.351 11.183 1.00 22.50 N
ATOM 23 C4 A B 8 13.837 -2.293 10.349 1.00 20.39 C
ATOM 24 P G B 9 6.892 -3.000 10.275 1.00 30.05 P
ATOM 25 OP1 G B 9 6.495 -3.330 11.670 1.00 29.78 O
ATOM 26 OP2 G B 9 6.659 -3.978 9.183 1.00 32.02 O
ATOM 27 O5' G B 9 6.162 -1.651 9.849 1.00 31.60 O
TER
Atoms:
C2: (15.164,3.334,3.959)
OP1: (10.075,8.877,-0.257)
OP2: (9.682,7.047,1.479)
C4: (13.448,1.779,4.078)
O5': (11.972,8.158,1.191)
C3': (15.054,5.956,0.517)
C1': (14.801,5.552,2.841)
O4': (13.714,6.330,2.353)
C5': (12.788,7.287,0.358)
P: (10.364,8.308,1.088)
O2: (16.320,3.665,4.164)
C4': (14.079,6.967,1.099)
C2': (15.857,5.539,1.740)
O2': (16.833,6.485,2.080)
N1: (14.298,4.222,3.276)
N3: (14.707,2.137,4.359)
N4: (13.053,0.547,4.420)
C6: (13.001,3.853,3.026)
C5: (12.538,2.654,3.411)
O3': (15.937,6.523,-0.436)
OP1: (10.075,8.877,-0.257)
OP2: (9.682,7.047,1.479)
C4: (13.448,1.779,4.078)
O5': (11.972,8.158,1.191)
C3': (15.054,5.956,0.517)
C1': (14.801,5.552,2.841)
O4': (13.714,6.330,2.353)
C5': (12.788,7.287,0.358)
P: (10.364,8.308,1.088)
O2: (16.320,3.665,4.164)
C4': (14.079,6.967,1.099)
C2': (15.857,5.539,1.740)
O2': (16.833,6.485,2.080)
N1: (14.298,4.222,3.276)
N3: (14.707,2.137,4.359)
N4: (13.053,0.547,4.420)
C6: (13.001,3.853,3.026)
C5: (12.538,2.654,3.411)
O3': (15.937,6.523,-0.436)
OP1: (8.406,-2.439,5.189)
OP2: (10.468,-1.046,4.578)
C3': (9.153,-2.358,9.029)
C1': (11.378,-2.241,9.827)
C5': (9.985,-3.882,7.114)
O4': (11.274,-3.464,9.135)
C8: (13.233,-0.699,8.977)
O2': (9.988,-0.348,10.175)
C6: (16.165,-1.903,10.477)
C5: (14.918,-1.537,9.959)
C4: (13.837,-2.293,10.349)
P: (9.877,-2.352,4.991)
C4': (9.920,-3.610,8.600)
C2': (10.293,-1.349,9.235)
C2: (15.079,-3.616,11.587)
N1: (16.213,-2.983,11.291)
N3: (13.848,-3.351,11.183)
N6: (17.311,-1.239,10.231)
N7: (14.523,-0.527,9.093)
N9: (12.748,-1.752,9.708)
O5': (10.492,-2.758,6.406)
O3': (8.466,-2.625,10.272)
OP2: (10.468,-1.046,4.578)
C3': (9.153,-2.358,9.029)
C1': (11.378,-2.241,9.827)
C5': (9.985,-3.882,7.114)
O4': (11.274,-3.464,9.135)
C8: (13.233,-0.699,8.977)
O2': (9.988,-0.348,10.175)
C6: (16.165,-1.903,10.477)
C5: (14.918,-1.537,9.959)
C4: (13.837,-2.293,10.349)
P: (9.877,-2.352,4.991)
C4': (9.920,-3.610,8.600)
C2': (10.293,-1.349,9.235)
C2: (15.079,-3.616,11.587)
N1: (16.213,-2.983,11.291)
N3: (13.848,-3.351,11.183)
N6: (17.311,-1.239,10.231)
N7: (14.523,-0.527,9.093)
N9: (12.748,-1.752,9.708)
O5': (10.492,-2.758,6.406)
O3': (8.466,-2.625,10.272)
Image (generated by PyMOL):