Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01039:01038
Extra
PDB:
ATOM 1 O3' A A1038 34.693 111.040 106.143 1.00 33.80 O
ATOM 2 P C A1039 34.351 109.919 105.048 1.00 34.16 P
ATOM 3 OP1 C A1039 34.167 110.660 103.781 1.00 31.86 O
ATOM 4 OP2 C A1039 33.256 109.048 105.561 1.00 33.82 O
ATOM 5 O5' C A1039 35.668 109.031 104.932 1.00 36.59 O
ATOM 6 C5' C A1039 36.925 109.598 104.515 1.00 41.15 C
ATOM 7 C4' C A1039 38.059 108.684 104.918 1.00 44.09 C
ATOM 8 O4' C A1039 38.102 108.581 106.362 1.00 46.56 O
ATOM 9 C3' C A1039 37.911 107.256 104.432 1.00 45.13 C
ATOM 10 O3' C A1039 38.505 107.140 103.154 1.00 46.96 O
ATOM 11 C2' C A1039 38.699 106.462 105.463 1.00 47.71 C
ATOM 12 O2' C A1039 40.091 106.488 105.219 1.00 50.28 O
ATOM 13 C1' C A1039 38.429 107.259 106.739 1.00 47.55 C
ATOM 14 N1 C A1039 37.364 106.746 107.620 1.00 49.09 N
ATOM 15 C2 C A1039 37.718 105.908 108.687 1.00 50.37 C
ATOM 16 O2 C A1039 38.906 105.561 108.817 1.00 52.92 O
ATOM 17 N3 C A1039 36.761 105.500 109.551 1.00 50.07 N
ATOM 18 C4 C A1039 35.500 105.894 109.382 1.00 49.22 C
ATOM 19 N4 C A1039 34.604 105.517 110.294 1.00 48.22 N
ATOM 20 C5 C A1039 35.104 106.706 108.280 1.00 49.18 C
ATOM 21 C6 C A1039 36.058 107.102 107.429 1.00 48.75 C
ATOM 22 P A A1040 37.593 106.853 101.871 1.00 49.04 P
ATOM 23 OP1 A A1040 37.574 108.090 101.045 1.00 49.54 O
ATOM 24 OP2 A A1040 36.309 106.262 102.337 1.00 47.95 O
ATOM 25 O5' A A1040 38.415 105.752 101.068 1.00 45.73 O
TER
ATOM 1 O3' A B1037 31.361 109.276 111.174 1.00 35.98 O
ATOM 2 P A B1038 31.824 108.297 109.991 1.00 35.89 P
ATOM 3 OP1 A B1038 30.653 108.043 109.113 1.00 36.57 O
ATOM 4 OP2 A B1038 32.537 107.148 110.602 1.00 34.94 O
ATOM 5 O5' A B1038 32.899 109.160 109.190 1.00 36.00 O
ATOM 6 C5' A B1038 32.537 110.399 108.550 1.00 35.02 C
ATOM 7 C4' A B1038 33.760 111.266 108.365 1.00 35.16 C
ATOM 8 O4' A B1038 34.357 111.485 109.662 1.00 34.74 O
ATOM 9 C3' A B1038 34.883 110.684 107.512 1.00 34.87 C
ATOM 10 O3' A B1038 34.693 111.040 106.143 1.00 33.80 O
ATOM 11 C2' A B1038 36.122 111.399 108.047 1.00 34.96 C
ATOM 12 O2' A B1038 36.341 112.668 107.466 1.00 35.68 O
ATOM 13 C1' A B1038 35.758 111.602 109.519 1.00 35.51 C
ATOM 14 N9 A B1038 36.394 110.696 110.467 1.00 35.55 N
ATOM 15 C8 A B1038 36.295 109.331 110.558 1.00 35.20 C
ATOM 16 N7 A B1038 36.977 108.821 111.552 1.00 35.96 N
ATOM 17 C5 A B1038 37.574 109.924 112.149 1.00 34.34 C
ATOM 18 C6 A B1038 38.423 110.056 113.250 1.00 33.00 C
ATOM 19 N6 A B1038 38.832 109.030 113.999 1.00 34.04 N
ATOM 20 N1 A B1038 38.840 111.293 113.571 1.00 32.45 N
ATOM 21 C2 A B1038 38.418 112.324 112.840 1.00 32.89 C
ATOM 22 N3 A B1038 37.616 112.332 111.791 1.00 33.33 N
ATOM 23 C4 A B1038 37.226 111.083 111.489 1.00 34.69 C
ATOM 24 P C B1039 34.351 109.919 105.048 1.00 34.16 P
ATOM 25 OP1 C B1039 34.167 110.660 103.781 1.00 31.86 O
ATOM 26 OP2 C B1039 33.256 109.048 105.561 1.00 33.82 O
ATOM 27 O5' C B1039 35.668 109.031 104.932 1.00 36.59 O
TER
ATOM 2 P C A1039 34.351 109.919 105.048 1.00 34.16 P
ATOM 3 OP1 C A1039 34.167 110.660 103.781 1.00 31.86 O
ATOM 4 OP2 C A1039 33.256 109.048 105.561 1.00 33.82 O
ATOM 5 O5' C A1039 35.668 109.031 104.932 1.00 36.59 O
ATOM 6 C5' C A1039 36.925 109.598 104.515 1.00 41.15 C
ATOM 7 C4' C A1039 38.059 108.684 104.918 1.00 44.09 C
ATOM 8 O4' C A1039 38.102 108.581 106.362 1.00 46.56 O
ATOM 9 C3' C A1039 37.911 107.256 104.432 1.00 45.13 C
ATOM 10 O3' C A1039 38.505 107.140 103.154 1.00 46.96 O
ATOM 11 C2' C A1039 38.699 106.462 105.463 1.00 47.71 C
ATOM 12 O2' C A1039 40.091 106.488 105.219 1.00 50.28 O
ATOM 13 C1' C A1039 38.429 107.259 106.739 1.00 47.55 C
ATOM 14 N1 C A1039 37.364 106.746 107.620 1.00 49.09 N
ATOM 15 C2 C A1039 37.718 105.908 108.687 1.00 50.37 C
ATOM 16 O2 C A1039 38.906 105.561 108.817 1.00 52.92 O
ATOM 17 N3 C A1039 36.761 105.500 109.551 1.00 50.07 N
ATOM 18 C4 C A1039 35.500 105.894 109.382 1.00 49.22 C
ATOM 19 N4 C A1039 34.604 105.517 110.294 1.00 48.22 N
ATOM 20 C5 C A1039 35.104 106.706 108.280 1.00 49.18 C
ATOM 21 C6 C A1039 36.058 107.102 107.429 1.00 48.75 C
ATOM 22 P A A1040 37.593 106.853 101.871 1.00 49.04 P
ATOM 23 OP1 A A1040 37.574 108.090 101.045 1.00 49.54 O
ATOM 24 OP2 A A1040 36.309 106.262 102.337 1.00 47.95 O
ATOM 25 O5' A A1040 38.415 105.752 101.068 1.00 45.73 O
TER
ATOM 1 O3' A B1037 31.361 109.276 111.174 1.00 35.98 O
ATOM 2 P A B1038 31.824 108.297 109.991 1.00 35.89 P
ATOM 3 OP1 A B1038 30.653 108.043 109.113 1.00 36.57 O
ATOM 4 OP2 A B1038 32.537 107.148 110.602 1.00 34.94 O
ATOM 5 O5' A B1038 32.899 109.160 109.190 1.00 36.00 O
ATOM 6 C5' A B1038 32.537 110.399 108.550 1.00 35.02 C
ATOM 7 C4' A B1038 33.760 111.266 108.365 1.00 35.16 C
ATOM 8 O4' A B1038 34.357 111.485 109.662 1.00 34.74 O
ATOM 9 C3' A B1038 34.883 110.684 107.512 1.00 34.87 C
ATOM 10 O3' A B1038 34.693 111.040 106.143 1.00 33.80 O
ATOM 11 C2' A B1038 36.122 111.399 108.047 1.00 34.96 C
ATOM 12 O2' A B1038 36.341 112.668 107.466 1.00 35.68 O
ATOM 13 C1' A B1038 35.758 111.602 109.519 1.00 35.51 C
ATOM 14 N9 A B1038 36.394 110.696 110.467 1.00 35.55 N
ATOM 15 C8 A B1038 36.295 109.331 110.558 1.00 35.20 C
ATOM 16 N7 A B1038 36.977 108.821 111.552 1.00 35.96 N
ATOM 17 C5 A B1038 37.574 109.924 112.149 1.00 34.34 C
ATOM 18 C6 A B1038 38.423 110.056 113.250 1.00 33.00 C
ATOM 19 N6 A B1038 38.832 109.030 113.999 1.00 34.04 N
ATOM 20 N1 A B1038 38.840 111.293 113.571 1.00 32.45 N
ATOM 21 C2 A B1038 38.418 112.324 112.840 1.00 32.89 C
ATOM 22 N3 A B1038 37.616 112.332 111.791 1.00 33.33 N
ATOM 23 C4 A B1038 37.226 111.083 111.489 1.00 34.69 C
ATOM 24 P C B1039 34.351 109.919 105.048 1.00 34.16 P
ATOM 25 OP1 C B1039 34.167 110.660 103.781 1.00 31.86 O
ATOM 26 OP2 C B1039 33.256 109.048 105.561 1.00 33.82 O
ATOM 27 O5' C B1039 35.668 109.031 104.932 1.00 36.59 O
TER
Atoms:
C2: (37.718,105.908,108.687)
OP1: (34.167,110.660,103.781)
OP2: (33.256,109.048,105.561)
C4: (35.500,105.894,109.382)
O5': (35.668,109.031,104.932)
C3': (37.911,107.256,104.432)
C1': (38.429,107.259,106.739)
O4': (38.102,108.581,106.362)
C5': (36.925,109.598,104.515)
P: (34.351,109.919,105.048)
O2: (38.906,105.561,108.817)
C4': (38.059,108.684,104.918)
C2': (38.699,106.462,105.463)
O2': (40.091,106.488,105.219)
N1: (37.364,106.746,107.620)
N3: (36.761,105.500,109.551)
N4: (34.604,105.517,110.294)
C6: (36.058,107.102,107.429)
C5: (35.104,106.706,108.280)
O3': (38.505,107.140,103.154)
OP1: (34.167,110.660,103.781)
OP2: (33.256,109.048,105.561)
C4: (35.500,105.894,109.382)
O5': (35.668,109.031,104.932)
C3': (37.911,107.256,104.432)
C1': (38.429,107.259,106.739)
O4': (38.102,108.581,106.362)
C5': (36.925,109.598,104.515)
P: (34.351,109.919,105.048)
O2: (38.906,105.561,108.817)
C4': (38.059,108.684,104.918)
C2': (38.699,106.462,105.463)
O2': (40.091,106.488,105.219)
N1: (37.364,106.746,107.620)
N3: (36.761,105.500,109.551)
N4: (34.604,105.517,110.294)
C6: (36.058,107.102,107.429)
C5: (35.104,106.706,108.280)
O3': (38.505,107.140,103.154)
OP1: (30.653,108.043,109.113)
OP2: (32.537,107.148,110.602)
C3': (34.883,110.684,107.512)
C1': (35.758,111.602,109.519)
C5': (32.537,110.399,108.550)
O4': (34.357,111.485,109.662)
C8: (36.295,109.331,110.558)
O2': (36.341,112.668,107.466)
C6: (38.423,110.056,113.250)
C5: (37.574,109.924,112.149)
C4: (37.226,111.083,111.489)
P: (31.824,108.297,109.991)
C4': (33.760,111.266,108.365)
C2': (36.122,111.399,108.047)
C2: (38.418,112.324,112.840)
N1: (38.840,111.293,113.571)
N3: (37.616,112.332,111.791)
N6: (38.832,109.030,113.999)
N7: (36.977,108.821,111.552)
N9: (36.394,110.696,110.467)
O5': (32.899,109.160,109.190)
O3': (34.693,111.040,106.143)
OP2: (32.537,107.148,110.602)
C3': (34.883,110.684,107.512)
C1': (35.758,111.602,109.519)
C5': (32.537,110.399,108.550)
O4': (34.357,111.485,109.662)
C8: (36.295,109.331,110.558)
O2': (36.341,112.668,107.466)
C6: (38.423,110.056,113.250)
C5: (37.574,109.924,112.149)
C4: (37.226,111.083,111.489)
P: (31.824,108.297,109.991)
C4': (33.760,111.266,108.365)
C2': (36.122,111.399,108.047)
C2: (38.418,112.324,112.840)
N1: (38.840,111.293,113.571)
N3: (37.616,112.332,111.791)
N6: (38.832,109.030,113.999)
N7: (36.977,108.821,111.552)
N9: (36.394,110.696,110.467)
O5': (32.899,109.160,109.190)
O3': (34.693,111.040,106.143)
Image (generated by PyMOL):