Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0967:0965
Extra
PDB:
ATOM 1 O3' A A 966 68.181 67.813 106.151 1.00 43.00 O
ATOM 2 P C A 967 68.668 66.679 107.186 1.00 46.01 P
ATOM 3 OP1 C A 967 69.232 67.301 108.407 1.00 45.06 O
ATOM 4 OP2 C A 967 69.493 65.719 106.414 1.00 49.25 O
ATOM 5 O5' C A 967 67.333 65.883 107.549 1.00 46.29 O
ATOM 6 C5' C A 967 66.706 66.024 108.826 1.00 42.40 C
ATOM 7 C4' C A 967 66.743 64.716 109.580 1.00 42.00 C
ATOM 8 O4' C A 967 66.774 65.043 110.986 1.00 43.49 O
ATOM 9 C3' C A 967 65.577 63.744 109.398 1.00 41.14 C
ATOM 10 O3' C A 967 65.814 62.804 108.339 1.00 40.61 O
ATOM 11 C2' C A 967 65.544 63.029 110.744 1.00 42.73 C
ATOM 12 O2' C A 967 66.508 62.003 110.810 1.00 42.50 O
ATOM 13 C1' C A 967 65.965 64.143 111.706 1.00 42.47 C
ATOM 14 N1 C A 967 64.892 64.927 112.340 1.00 43.67 N
ATOM 15 C2 C A 967 64.229 64.400 113.448 1.00 45.08 C
ATOM 16 O2 C A 967 64.515 63.254 113.832 1.00 46.08 O
ATOM 17 N3 C A 967 63.296 65.156 114.076 1.00 44.50 N
ATOM 18 C4 C A 967 63.021 66.387 113.631 1.00 43.76 C
ATOM 19 N4 C A 967 62.126 67.110 114.295 1.00 43.54 N
ATOM 20 C5 C A 967 63.658 66.931 112.488 1.00 43.64 C
ATOM 21 C6 C A 967 64.572 66.173 111.874 1.00 44.20 C
ATOM 22 P U A 968 64.586 61.986 107.664 1.00 42.48 P
ATOM 23 OP1 U A 968 65.160 60.988 106.731 1.00 37.36 O
ATOM 24 OP2 U A 968 63.601 62.974 107.157 1.00 43.47 O
ATOM 25 O5' U A 968 63.876 61.205 108.859 1.00 41.86 O
TER
ATOM 1 O3' A B 964 62.874 71.855 114.394 1.00 38.89 O
ATOM 2 P A B 965 61.624 71.449 113.461 1.00 39.61 P
ATOM 3 OP1 A B 965 60.540 72.447 113.677 1.00 37.06 O
ATOM 4 OP2 A B 965 61.330 70.005 113.641 1.00 38.36 O
ATOM 5 O5' A B 965 62.192 71.699 111.994 1.00 38.57 O
ATOM 6 C5' A B 965 62.653 73.012 111.610 1.00 40.40 C
ATOM 7 C4' A B 965 62.913 73.060 110.131 1.00 40.61 C
ATOM 8 O4' A B 965 63.119 74.424 109.709 1.00 42.55 O
ATOM 9 C3' A B 965 64.168 72.350 109.680 1.00 41.63 C
ATOM 10 O3' A B 965 63.878 70.963 109.588 1.00 42.46 O
ATOM 11 C2' A B 965 64.431 72.997 108.324 1.00 41.68 C
ATOM 12 O2' A B 965 63.584 72.452 107.330 1.00 41.90 O
ATOM 13 C1' A B 965 63.978 74.440 108.583 1.00 43.20 C
ATOM 14 N9 A B 965 64.987 75.493 108.773 1.00 44.44 N
ATOM 15 C8 A B 965 65.210 76.231 109.909 1.00 44.28 C
ATOM 16 N7 A B 965 66.121 77.159 109.769 1.00 44.25 N
ATOM 17 C5 A B 965 66.542 77.018 108.457 1.00 44.92 C
ATOM 18 C6 A B 965 67.489 77.721 107.687 1.00 44.80 C
ATOM 19 N6 A B 965 68.201 78.748 108.143 1.00 44.96 N
ATOM 20 N1 A B 965 67.675 77.328 106.413 1.00 44.91 N
ATOM 21 C2 A B 965 66.955 76.301 105.949 1.00 46.47 C
ATOM 22 N3 A B 965 66.033 75.566 106.570 1.00 46.41 N
ATOM 23 C4 A B 965 65.869 75.981 107.837 1.00 45.30 C
ATOM 24 P A B 966 65.020 69.874 109.882 1.00 41.66 P
ATOM 25 OP1 A B 966 64.269 68.590 109.903 1.00 39.55 O
ATOM 26 OP2 A B 966 65.856 70.254 111.053 1.00 37.82 O
ATOM 27 O5' A B 966 65.950 69.952 108.589 1.00 38.55 O
TER
ATOM 2 P C A 967 68.668 66.679 107.186 1.00 46.01 P
ATOM 3 OP1 C A 967 69.232 67.301 108.407 1.00 45.06 O
ATOM 4 OP2 C A 967 69.493 65.719 106.414 1.00 49.25 O
ATOM 5 O5' C A 967 67.333 65.883 107.549 1.00 46.29 O
ATOM 6 C5' C A 967 66.706 66.024 108.826 1.00 42.40 C
ATOM 7 C4' C A 967 66.743 64.716 109.580 1.00 42.00 C
ATOM 8 O4' C A 967 66.774 65.043 110.986 1.00 43.49 O
ATOM 9 C3' C A 967 65.577 63.744 109.398 1.00 41.14 C
ATOM 10 O3' C A 967 65.814 62.804 108.339 1.00 40.61 O
ATOM 11 C2' C A 967 65.544 63.029 110.744 1.00 42.73 C
ATOM 12 O2' C A 967 66.508 62.003 110.810 1.00 42.50 O
ATOM 13 C1' C A 967 65.965 64.143 111.706 1.00 42.47 C
ATOM 14 N1 C A 967 64.892 64.927 112.340 1.00 43.67 N
ATOM 15 C2 C A 967 64.229 64.400 113.448 1.00 45.08 C
ATOM 16 O2 C A 967 64.515 63.254 113.832 1.00 46.08 O
ATOM 17 N3 C A 967 63.296 65.156 114.076 1.00 44.50 N
ATOM 18 C4 C A 967 63.021 66.387 113.631 1.00 43.76 C
ATOM 19 N4 C A 967 62.126 67.110 114.295 1.00 43.54 N
ATOM 20 C5 C A 967 63.658 66.931 112.488 1.00 43.64 C
ATOM 21 C6 C A 967 64.572 66.173 111.874 1.00 44.20 C
ATOM 22 P U A 968 64.586 61.986 107.664 1.00 42.48 P
ATOM 23 OP1 U A 968 65.160 60.988 106.731 1.00 37.36 O
ATOM 24 OP2 U A 968 63.601 62.974 107.157 1.00 43.47 O
ATOM 25 O5' U A 968 63.876 61.205 108.859 1.00 41.86 O
TER
ATOM 1 O3' A B 964 62.874 71.855 114.394 1.00 38.89 O
ATOM 2 P A B 965 61.624 71.449 113.461 1.00 39.61 P
ATOM 3 OP1 A B 965 60.540 72.447 113.677 1.00 37.06 O
ATOM 4 OP2 A B 965 61.330 70.005 113.641 1.00 38.36 O
ATOM 5 O5' A B 965 62.192 71.699 111.994 1.00 38.57 O
ATOM 6 C5' A B 965 62.653 73.012 111.610 1.00 40.40 C
ATOM 7 C4' A B 965 62.913 73.060 110.131 1.00 40.61 C
ATOM 8 O4' A B 965 63.119 74.424 109.709 1.00 42.55 O
ATOM 9 C3' A B 965 64.168 72.350 109.680 1.00 41.63 C
ATOM 10 O3' A B 965 63.878 70.963 109.588 1.00 42.46 O
ATOM 11 C2' A B 965 64.431 72.997 108.324 1.00 41.68 C
ATOM 12 O2' A B 965 63.584 72.452 107.330 1.00 41.90 O
ATOM 13 C1' A B 965 63.978 74.440 108.583 1.00 43.20 C
ATOM 14 N9 A B 965 64.987 75.493 108.773 1.00 44.44 N
ATOM 15 C8 A B 965 65.210 76.231 109.909 1.00 44.28 C
ATOM 16 N7 A B 965 66.121 77.159 109.769 1.00 44.25 N
ATOM 17 C5 A B 965 66.542 77.018 108.457 1.00 44.92 C
ATOM 18 C6 A B 965 67.489 77.721 107.687 1.00 44.80 C
ATOM 19 N6 A B 965 68.201 78.748 108.143 1.00 44.96 N
ATOM 20 N1 A B 965 67.675 77.328 106.413 1.00 44.91 N
ATOM 21 C2 A B 965 66.955 76.301 105.949 1.00 46.47 C
ATOM 22 N3 A B 965 66.033 75.566 106.570 1.00 46.41 N
ATOM 23 C4 A B 965 65.869 75.981 107.837 1.00 45.30 C
ATOM 24 P A B 966 65.020 69.874 109.882 1.00 41.66 P
ATOM 25 OP1 A B 966 64.269 68.590 109.903 1.00 39.55 O
ATOM 26 OP2 A B 966 65.856 70.254 111.053 1.00 37.82 O
ATOM 27 O5' A B 966 65.950 69.952 108.589 1.00 38.55 O
TER
Atoms:
C2: (64.229,64.400,113.448)
OP1: (69.232,67.301,108.407)
OP2: (69.493,65.719,106.414)
C4: (63.021,66.387,113.631)
O5': (67.333,65.883,107.549)
C3': (65.577,63.744,109.398)
C1': (65.965,64.143,111.706)
O4': (66.774,65.043,110.986)
C5': (66.706,66.024,108.826)
P: (68.668,66.679,107.186)
O2: (64.515,63.254,113.832)
C4': (66.743,64.716,109.580)
C2': (65.544,63.029,110.744)
O2': (66.508,62.003,110.810)
N1: (64.892,64.927,112.340)
N3: (63.296,65.156,114.076)
N4: (62.126,67.110,114.295)
C6: (64.572,66.173,111.874)
C5: (63.658,66.931,112.488)
O3': (65.814,62.804,108.339)
OP1: (69.232,67.301,108.407)
OP2: (69.493,65.719,106.414)
C4: (63.021,66.387,113.631)
O5': (67.333,65.883,107.549)
C3': (65.577,63.744,109.398)
C1': (65.965,64.143,111.706)
O4': (66.774,65.043,110.986)
C5': (66.706,66.024,108.826)
P: (68.668,66.679,107.186)
O2: (64.515,63.254,113.832)
C4': (66.743,64.716,109.580)
C2': (65.544,63.029,110.744)
O2': (66.508,62.003,110.810)
N1: (64.892,64.927,112.340)
N3: (63.296,65.156,114.076)
N4: (62.126,67.110,114.295)
C6: (64.572,66.173,111.874)
C5: (63.658,66.931,112.488)
O3': (65.814,62.804,108.339)
OP1: (60.540,72.447,113.677)
OP2: (61.330,70.005,113.641)
C3': (64.168,72.350,109.680)
C1': (63.978,74.440,108.583)
C5': (62.653,73.012,111.610)
O4': (63.119,74.424,109.709)
C8: (65.210,76.231,109.909)
O2': (63.584,72.452,107.330)
C6: (67.489,77.721,107.687)
C5: (66.542,77.018,108.457)
C4: (65.869,75.981,107.837)
P: (61.624,71.449,113.461)
C4': (62.913,73.060,110.131)
C2': (64.431,72.997,108.324)
C2: (66.955,76.301,105.949)
N1: (67.675,77.328,106.413)
N3: (66.033,75.566,106.570)
N6: (68.201,78.748,108.143)
N7: (66.121,77.159,109.769)
N9: (64.987,75.493,108.773)
O5': (62.192,71.699,111.994)
O3': (63.878,70.963,109.588)
OP2: (61.330,70.005,113.641)
C3': (64.168,72.350,109.680)
C1': (63.978,74.440,108.583)
C5': (62.653,73.012,111.610)
O4': (63.119,74.424,109.709)
C8: (65.210,76.231,109.909)
O2': (63.584,72.452,107.330)
C6: (67.489,77.721,107.687)
C5: (66.542,77.018,108.457)
C4: (65.869,75.981,107.837)
P: (61.624,71.449,113.461)
C4': (62.913,73.060,110.131)
C2': (64.431,72.997,108.324)
C2: (66.955,76.301,105.949)
N1: (67.675,77.328,106.413)
N3: (66.033,75.566,106.570)
N6: (68.201,78.748,108.143)
N7: (66.121,77.159,109.769)
N9: (64.987,75.493,108.773)
O5': (62.192,71.699,111.994)
O3': (63.878,70.963,109.588)
Image (generated by PyMOL):