Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:090:089
Extra
PDB:
ATOM 1 O3' A A 89 40.631 156.923 27.917 1.00 54.55 O
ATOM 2 P C A 90 41.807 155.835 27.797 1.00 53.96 P
ATOM 3 OP1 C A 90 42.502 155.814 29.111 1.00 54.42 O
ATOM 4 OP2 C A 90 42.585 156.100 26.562 1.00 53.11 O
ATOM 5 O5' C A 90 41.034 154.464 27.587 1.00 52.88 O
ATOM 6 C5' C A 90 40.118 153.973 28.571 1.00 53.76 C
ATOM 7 C4' C A 90 39.294 152.864 27.982 1.00 54.15 C
ATOM 8 O4' C A 90 38.413 153.414 26.966 1.00 55.00 O
ATOM 9 C3' C A 90 40.093 151.814 27.231 1.00 53.27 C
ATOM 10 O3' C A 90 40.697 150.861 28.087 1.00 52.70 O
ATOM 11 C2' C A 90 39.042 151.226 26.305 1.00 55.09 C
ATOM 12 O2' C A 90 38.143 150.353 26.962 1.00 54.59 O
ATOM 13 C1' C A 90 38.289 152.490 25.893 1.00 55.90 C
ATOM 14 N1 C A 90 38.840 153.105 24.665 1.00 57.12 N
ATOM 15 C2 C A 90 38.357 152.676 23.418 1.00 56.97 C
ATOM 16 O2 C A 90 37.508 151.778 23.379 1.00 57.29 O
ATOM 17 N3 C A 90 38.831 153.249 22.290 1.00 57.31 N
ATOM 18 C4 C A 90 39.756 154.205 22.367 1.00 57.46 C
ATOM 19 N4 C A 90 40.184 154.748 21.228 1.00 57.70 N
ATOM 20 C5 C A 90 40.281 154.649 23.616 1.00 57.93 C
ATOM 21 C6 C A 90 39.800 154.079 24.730 1.00 57.49 C
ATOM 22 P C A 91 42.121 150.230 27.688 1.00 52.02 P
ATOM 23 OP1 C A 91 42.606 149.442 28.843 1.00 52.61 O
ATOM 24 OP2 C A 91 42.975 151.301 27.134 1.00 53.84 O
ATOM 25 O5' C A 91 41.771 149.223 26.507 1.00 53.32 O
TER
ATOM 1 O3' A B 88 41.069 160.168 22.631 1.00 53.96 O
ATOM 2 P A B 89 41.565 158.673 22.965 1.00 54.72 P
ATOM 3 OP1 A B 89 42.980 158.753 23.410 1.00 52.95 O
ATOM 4 OP2 A B 89 41.217 157.803 21.818 1.00 54.02 O
ATOM 5 O5' A B 89 40.651 158.237 24.202 1.00 54.43 O
ATOM 6 C5' A B 89 40.647 159.008 25.422 1.00 54.30 C
ATOM 7 C4' A B 89 39.590 158.504 26.383 1.00 54.74 C
ATOM 8 O4' A B 89 38.285 158.557 25.752 1.00 56.98 O
ATOM 9 C3' A B 89 39.691 157.065 26.860 1.00 55.00 C
ATOM 10 O3' A B 89 40.631 156.923 27.917 1.00 54.55 O
ATOM 11 C2' A B 89 38.275 156.805 27.356 1.00 55.95 C
ATOM 12 O2' A B 89 38.031 157.381 28.621 1.00 55.06 O
ATOM 13 C1' A B 89 37.448 157.548 26.302 1.00 56.84 C
ATOM 14 N9 A B 89 37.014 156.656 25.224 1.00 57.41 N
ATOM 15 C8 A B 89 37.618 156.423 24.011 1.00 57.23 C
ATOM 16 N7 A B 89 37.009 155.516 23.286 1.00 57.13 N
ATOM 17 C5 A B 89 35.925 155.138 24.066 1.00 56.77 C
ATOM 18 C6 A B 89 34.891 154.207 23.863 1.00 56.84 C
ATOM 19 N6 A B 89 34.780 153.446 22.776 1.00 57.23 N
ATOM 20 N1 A B 89 33.961 154.080 24.833 1.00 57.15 N
ATOM 21 C2 A B 89 34.072 154.839 25.927 1.00 57.24 C
ATOM 22 N3 A B 89 34.999 155.743 26.236 1.00 57.25 N
ATOM 23 C4 A B 89 35.907 155.844 25.253 1.00 56.64 C
ATOM 24 P C B 90 41.807 155.835 27.797 1.00 53.96 P
ATOM 25 OP1 C B 90 42.502 155.814 29.111 1.00 54.42 O
ATOM 26 OP2 C B 90 42.585 156.100 26.562 1.00 53.11 O
ATOM 27 O5' C B 90 41.034 154.464 27.587 1.00 52.88 O
TER
ATOM 2 P C A 90 41.807 155.835 27.797 1.00 53.96 P
ATOM 3 OP1 C A 90 42.502 155.814 29.111 1.00 54.42 O
ATOM 4 OP2 C A 90 42.585 156.100 26.562 1.00 53.11 O
ATOM 5 O5' C A 90 41.034 154.464 27.587 1.00 52.88 O
ATOM 6 C5' C A 90 40.118 153.973 28.571 1.00 53.76 C
ATOM 7 C4' C A 90 39.294 152.864 27.982 1.00 54.15 C
ATOM 8 O4' C A 90 38.413 153.414 26.966 1.00 55.00 O
ATOM 9 C3' C A 90 40.093 151.814 27.231 1.00 53.27 C
ATOM 10 O3' C A 90 40.697 150.861 28.087 1.00 52.70 O
ATOM 11 C2' C A 90 39.042 151.226 26.305 1.00 55.09 C
ATOM 12 O2' C A 90 38.143 150.353 26.962 1.00 54.59 O
ATOM 13 C1' C A 90 38.289 152.490 25.893 1.00 55.90 C
ATOM 14 N1 C A 90 38.840 153.105 24.665 1.00 57.12 N
ATOM 15 C2 C A 90 38.357 152.676 23.418 1.00 56.97 C
ATOM 16 O2 C A 90 37.508 151.778 23.379 1.00 57.29 O
ATOM 17 N3 C A 90 38.831 153.249 22.290 1.00 57.31 N
ATOM 18 C4 C A 90 39.756 154.205 22.367 1.00 57.46 C
ATOM 19 N4 C A 90 40.184 154.748 21.228 1.00 57.70 N
ATOM 20 C5 C A 90 40.281 154.649 23.616 1.00 57.93 C
ATOM 21 C6 C A 90 39.800 154.079 24.730 1.00 57.49 C
ATOM 22 P C A 91 42.121 150.230 27.688 1.00 52.02 P
ATOM 23 OP1 C A 91 42.606 149.442 28.843 1.00 52.61 O
ATOM 24 OP2 C A 91 42.975 151.301 27.134 1.00 53.84 O
ATOM 25 O5' C A 91 41.771 149.223 26.507 1.00 53.32 O
TER
ATOM 1 O3' A B 88 41.069 160.168 22.631 1.00 53.96 O
ATOM 2 P A B 89 41.565 158.673 22.965 1.00 54.72 P
ATOM 3 OP1 A B 89 42.980 158.753 23.410 1.00 52.95 O
ATOM 4 OP2 A B 89 41.217 157.803 21.818 1.00 54.02 O
ATOM 5 O5' A B 89 40.651 158.237 24.202 1.00 54.43 O
ATOM 6 C5' A B 89 40.647 159.008 25.422 1.00 54.30 C
ATOM 7 C4' A B 89 39.590 158.504 26.383 1.00 54.74 C
ATOM 8 O4' A B 89 38.285 158.557 25.752 1.00 56.98 O
ATOM 9 C3' A B 89 39.691 157.065 26.860 1.00 55.00 C
ATOM 10 O3' A B 89 40.631 156.923 27.917 1.00 54.55 O
ATOM 11 C2' A B 89 38.275 156.805 27.356 1.00 55.95 C
ATOM 12 O2' A B 89 38.031 157.381 28.621 1.00 55.06 O
ATOM 13 C1' A B 89 37.448 157.548 26.302 1.00 56.84 C
ATOM 14 N9 A B 89 37.014 156.656 25.224 1.00 57.41 N
ATOM 15 C8 A B 89 37.618 156.423 24.011 1.00 57.23 C
ATOM 16 N7 A B 89 37.009 155.516 23.286 1.00 57.13 N
ATOM 17 C5 A B 89 35.925 155.138 24.066 1.00 56.77 C
ATOM 18 C6 A B 89 34.891 154.207 23.863 1.00 56.84 C
ATOM 19 N6 A B 89 34.780 153.446 22.776 1.00 57.23 N
ATOM 20 N1 A B 89 33.961 154.080 24.833 1.00 57.15 N
ATOM 21 C2 A B 89 34.072 154.839 25.927 1.00 57.24 C
ATOM 22 N3 A B 89 34.999 155.743 26.236 1.00 57.25 N
ATOM 23 C4 A B 89 35.907 155.844 25.253 1.00 56.64 C
ATOM 24 P C B 90 41.807 155.835 27.797 1.00 53.96 P
ATOM 25 OP1 C B 90 42.502 155.814 29.111 1.00 54.42 O
ATOM 26 OP2 C B 90 42.585 156.100 26.562 1.00 53.11 O
ATOM 27 O5' C B 90 41.034 154.464 27.587 1.00 52.88 O
TER
Atoms:
C2: (38.357,152.676,23.418)
OP1: (42.502,155.814,29.111)
OP2: (42.585,156.100,26.562)
C4: (39.756,154.205,22.367)
O5': (41.034,154.464,27.587)
C3': (40.093,151.814,27.231)
C1': (38.289,152.490,25.893)
O4': (38.413,153.414,26.966)
C5': (40.118,153.973,28.571)
P: (41.807,155.835,27.797)
O2: (37.508,151.778,23.379)
C4': (39.294,152.864,27.982)
C2': (39.042,151.226,26.305)
O2': (38.143,150.353,26.962)
N1: (38.840,153.105,24.665)
N3: (38.831,153.249,22.290)
N4: (40.184,154.748,21.228)
C6: (39.800,154.079,24.730)
C5: (40.281,154.649,23.616)
O3': (40.697,150.861,28.087)
OP1: (42.502,155.814,29.111)
OP2: (42.585,156.100,26.562)
C4: (39.756,154.205,22.367)
O5': (41.034,154.464,27.587)
C3': (40.093,151.814,27.231)
C1': (38.289,152.490,25.893)
O4': (38.413,153.414,26.966)
C5': (40.118,153.973,28.571)
P: (41.807,155.835,27.797)
O2: (37.508,151.778,23.379)
C4': (39.294,152.864,27.982)
C2': (39.042,151.226,26.305)
O2': (38.143,150.353,26.962)
N1: (38.840,153.105,24.665)
N3: (38.831,153.249,22.290)
N4: (40.184,154.748,21.228)
C6: (39.800,154.079,24.730)
C5: (40.281,154.649,23.616)
O3': (40.697,150.861,28.087)
OP1: (42.980,158.753,23.410)
OP2: (41.217,157.803,21.818)
C3': (39.691,157.065,26.860)
C1': (37.448,157.548,26.302)
C5': (40.647,159.008,25.422)
O4': (38.285,158.557,25.752)
C8: (37.618,156.423,24.011)
O2': (38.031,157.381,28.621)
C6: (34.891,154.207,23.863)
C5: (35.925,155.138,24.066)
C4: (35.907,155.844,25.253)
P: (41.565,158.673,22.965)
C4': (39.590,158.504,26.383)
C2': (38.275,156.805,27.356)
C2: (34.072,154.839,25.927)
N1: (33.961,154.080,24.833)
N3: (34.999,155.743,26.236)
N6: (34.780,153.446,22.776)
N7: (37.009,155.516,23.286)
N9: (37.014,156.656,25.224)
O5': (40.651,158.237,24.202)
O3': (40.631,156.923,27.917)
OP2: (41.217,157.803,21.818)
C3': (39.691,157.065,26.860)
C1': (37.448,157.548,26.302)
C5': (40.647,159.008,25.422)
O4': (38.285,158.557,25.752)
C8: (37.618,156.423,24.011)
O2': (38.031,157.381,28.621)
C6: (34.891,154.207,23.863)
C5: (35.925,155.138,24.066)
C4: (35.907,155.844,25.253)
P: (41.565,158.673,22.965)
C4': (39.590,158.504,26.383)
C2': (38.275,156.805,27.356)
C2: (34.072,154.839,25.927)
N1: (33.961,154.080,24.833)
N3: (34.999,155.743,26.236)
N6: (34.780,153.446,22.776)
N7: (37.009,155.516,23.286)
N9: (37.014,156.656,25.224)
O5': (40.651,158.237,24.202)
O3': (40.631,156.923,27.917)
Image (generated by PyMOL):