Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02175:02210
Extra
PDB:
ATOM 1 O3' U A2174 81.018 31.073 92.424 1.00 68.01 O
ATOM 2 P C A2175 79.907 30.943 93.587 1.00 68.69 P
ATOM 3 OP1 C A2175 80.408 29.842 94.457 1.00 69.00 O
ATOM 4 OP2 C A2175 78.561 30.834 92.960 1.00 68.60 O
ATOM 5 O5' C A2175 79.968 32.321 94.403 1.00 65.86 O
ATOM 6 C5' C A2175 81.074 32.599 95.287 1.00 61.73 C
ATOM 7 C4' C A2175 81.228 34.090 95.544 1.00 59.14 C
ATOM 8 O4' C A2175 80.877 34.876 94.373 1.00 57.21 O
ATOM 9 C3' C A2175 80.352 34.743 96.594 1.00 57.27 C
ATOM 10 O3' C A2175 80.800 34.408 97.908 1.00 58.18 O
ATOM 11 C2' C A2175 80.611 36.220 96.301 1.00 56.53 C
ATOM 12 O2' C A2175 81.851 36.657 96.808 1.00 55.83 O
ATOM 13 C1' C A2175 80.713 36.227 94.772 1.00 55.87 C
ATOM 14 N1 C A2175 79.534 36.817 94.094 1.00 57.58 N
ATOM 15 C2 C A2175 79.326 38.223 94.164 1.00 57.26 C
ATOM 16 O2 C A2175 80.146 38.937 94.766 1.00 56.94 O
ATOM 17 N3 C A2175 78.237 38.758 93.570 1.00 56.48 N
ATOM 18 C4 C A2175 77.372 37.972 92.924 1.00 56.96 C
ATOM 19 N4 C A2175 76.302 38.550 92.361 1.00 56.34 N
ATOM 20 C5 C A2175 77.560 36.559 92.826 1.00 57.17 C
ATOM 21 C6 C A2175 78.643 36.029 93.417 1.00 58.06 C
ATOM 22 P U A2176 79.870 34.721 99.193 1.00 58.96 P
ATOM 23 OP1 U A2176 80.549 34.095 100.357 1.00 58.65 O
ATOM 24 OP2 U A2176 78.450 34.376 98.900 1.00 57.75 O
ATOM 25 O5' U A2176 79.959 36.301 99.376 1.00 59.88 O
TER
ATOM 1 O3' A B2209 73.474 37.652 92.288 1.00 58.51 O
ATOM 2 P A B2210 72.931 38.748 91.243 1.00 58.52 P
ATOM 3 OP1 A B2210 71.651 38.255 90.665 1.00 57.62 O
ATOM 4 OP2 A B2210 74.049 39.117 90.333 1.00 58.51 O
ATOM 5 O5' A B2210 72.639 40.009 92.168 1.00 58.34 O
ATOM 6 C5' A B2210 71.367 40.670 92.130 1.00 56.43 C
ATOM 7 C4' A B2210 71.549 42.155 91.933 1.00 54.15 C
ATOM 8 O4' A B2210 72.019 42.780 93.164 1.00 53.02 O
ATOM 9 C3' A B2210 72.524 42.575 90.840 1.00 52.79 C
ATOM 10 O3' A B2210 71.981 43.713 90.190 1.00 54.93 O
ATOM 11 C2' A B2210 73.781 42.921 91.638 1.00 51.28 C
ATOM 12 O2' A B2210 74.652 43.826 90.995 1.00 49.77 O
ATOM 13 C1' A B2210 73.175 43.538 92.895 1.00 49.99 C
ATOM 14 N9 A B2210 74.047 43.488 94.064 1.00 48.98 N
ATOM 15 C8 A B2210 74.709 42.413 94.588 1.00 49.51 C
ATOM 16 N7 A B2210 75.470 42.708 95.615 1.00 50.14 N
ATOM 17 C5 A B2210 75.289 44.070 95.784 1.00 50.72 C
ATOM 18 C6 A B2210 75.841 45.000 96.691 1.00 50.79 C
ATOM 19 N6 A B2210 76.737 44.692 97.627 1.00 51.80 N
ATOM 20 N1 A B2210 75.439 46.281 96.596 1.00 51.79 N
ATOM 21 C2 A B2210 74.549 46.605 95.646 1.00 53.90 C
ATOM 22 N3 A B2210 73.970 45.828 94.729 1.00 53.66 N
ATOM 23 C4 A B2210 74.392 44.558 94.851 1.00 51.48 C
ATOM 24 P A B2211 72.619 44.239 88.819 1.00 55.53 P
ATOM 25 OP1 A B2211 71.507 44.684 87.948 1.00 55.15 O
ATOM 26 OP2 A B2211 73.565 43.210 88.319 1.00 56.86 O
ATOM 27 O5' A B2211 73.438 45.523 89.296 1.00 56.18 O
TER
ATOM 2 P C A2175 79.907 30.943 93.587 1.00 68.69 P
ATOM 3 OP1 C A2175 80.408 29.842 94.457 1.00 69.00 O
ATOM 4 OP2 C A2175 78.561 30.834 92.960 1.00 68.60 O
ATOM 5 O5' C A2175 79.968 32.321 94.403 1.00 65.86 O
ATOM 6 C5' C A2175 81.074 32.599 95.287 1.00 61.73 C
ATOM 7 C4' C A2175 81.228 34.090 95.544 1.00 59.14 C
ATOM 8 O4' C A2175 80.877 34.876 94.373 1.00 57.21 O
ATOM 9 C3' C A2175 80.352 34.743 96.594 1.00 57.27 C
ATOM 10 O3' C A2175 80.800 34.408 97.908 1.00 58.18 O
ATOM 11 C2' C A2175 80.611 36.220 96.301 1.00 56.53 C
ATOM 12 O2' C A2175 81.851 36.657 96.808 1.00 55.83 O
ATOM 13 C1' C A2175 80.713 36.227 94.772 1.00 55.87 C
ATOM 14 N1 C A2175 79.534 36.817 94.094 1.00 57.58 N
ATOM 15 C2 C A2175 79.326 38.223 94.164 1.00 57.26 C
ATOM 16 O2 C A2175 80.146 38.937 94.766 1.00 56.94 O
ATOM 17 N3 C A2175 78.237 38.758 93.570 1.00 56.48 N
ATOM 18 C4 C A2175 77.372 37.972 92.924 1.00 56.96 C
ATOM 19 N4 C A2175 76.302 38.550 92.361 1.00 56.34 N
ATOM 20 C5 C A2175 77.560 36.559 92.826 1.00 57.17 C
ATOM 21 C6 C A2175 78.643 36.029 93.417 1.00 58.06 C
ATOM 22 P U A2176 79.870 34.721 99.193 1.00 58.96 P
ATOM 23 OP1 U A2176 80.549 34.095 100.357 1.00 58.65 O
ATOM 24 OP2 U A2176 78.450 34.376 98.900 1.00 57.75 O
ATOM 25 O5' U A2176 79.959 36.301 99.376 1.00 59.88 O
TER
ATOM 1 O3' A B2209 73.474 37.652 92.288 1.00 58.51 O
ATOM 2 P A B2210 72.931 38.748 91.243 1.00 58.52 P
ATOM 3 OP1 A B2210 71.651 38.255 90.665 1.00 57.62 O
ATOM 4 OP2 A B2210 74.049 39.117 90.333 1.00 58.51 O
ATOM 5 O5' A B2210 72.639 40.009 92.168 1.00 58.34 O
ATOM 6 C5' A B2210 71.367 40.670 92.130 1.00 56.43 C
ATOM 7 C4' A B2210 71.549 42.155 91.933 1.00 54.15 C
ATOM 8 O4' A B2210 72.019 42.780 93.164 1.00 53.02 O
ATOM 9 C3' A B2210 72.524 42.575 90.840 1.00 52.79 C
ATOM 10 O3' A B2210 71.981 43.713 90.190 1.00 54.93 O
ATOM 11 C2' A B2210 73.781 42.921 91.638 1.00 51.28 C
ATOM 12 O2' A B2210 74.652 43.826 90.995 1.00 49.77 O
ATOM 13 C1' A B2210 73.175 43.538 92.895 1.00 49.99 C
ATOM 14 N9 A B2210 74.047 43.488 94.064 1.00 48.98 N
ATOM 15 C8 A B2210 74.709 42.413 94.588 1.00 49.51 C
ATOM 16 N7 A B2210 75.470 42.708 95.615 1.00 50.14 N
ATOM 17 C5 A B2210 75.289 44.070 95.784 1.00 50.72 C
ATOM 18 C6 A B2210 75.841 45.000 96.691 1.00 50.79 C
ATOM 19 N6 A B2210 76.737 44.692 97.627 1.00 51.80 N
ATOM 20 N1 A B2210 75.439 46.281 96.596 1.00 51.79 N
ATOM 21 C2 A B2210 74.549 46.605 95.646 1.00 53.90 C
ATOM 22 N3 A B2210 73.970 45.828 94.729 1.00 53.66 N
ATOM 23 C4 A B2210 74.392 44.558 94.851 1.00 51.48 C
ATOM 24 P A B2211 72.619 44.239 88.819 1.00 55.53 P
ATOM 25 OP1 A B2211 71.507 44.684 87.948 1.00 55.15 O
ATOM 26 OP2 A B2211 73.565 43.210 88.319 1.00 56.86 O
ATOM 27 O5' A B2211 73.438 45.523 89.296 1.00 56.18 O
TER
Atoms:
C2: (79.326,38.223,94.164)
OP1: (80.408,29.842,94.457)
OP2: (78.561,30.834,92.960)
C4: (77.372,37.972,92.924)
O5': (79.968,32.321,94.403)
C3': (80.352,34.743,96.594)
C1': (80.713,36.227,94.772)
O4': (80.877,34.876,94.373)
C5': (81.074,32.599,95.287)
P: (79.907,30.943,93.587)
O2: (80.146,38.937,94.766)
C4': (81.228,34.090,95.544)
C2': (80.611,36.220,96.301)
O2': (81.851,36.657,96.808)
N1: (79.534,36.817,94.094)
N3: (78.237,38.758,93.570)
N4: (76.302,38.550,92.361)
C6: (78.643,36.029,93.417)
C5: (77.560,36.559,92.826)
O3': (80.800,34.408,97.908)
OP1: (80.408,29.842,94.457)
OP2: (78.561,30.834,92.960)
C4: (77.372,37.972,92.924)
O5': (79.968,32.321,94.403)
C3': (80.352,34.743,96.594)
C1': (80.713,36.227,94.772)
O4': (80.877,34.876,94.373)
C5': (81.074,32.599,95.287)
P: (79.907,30.943,93.587)
O2: (80.146,38.937,94.766)
C4': (81.228,34.090,95.544)
C2': (80.611,36.220,96.301)
O2': (81.851,36.657,96.808)
N1: (79.534,36.817,94.094)
N3: (78.237,38.758,93.570)
N4: (76.302,38.550,92.361)
C6: (78.643,36.029,93.417)
C5: (77.560,36.559,92.826)
O3': (80.800,34.408,97.908)
OP1: (71.651,38.255,90.665)
OP2: (74.049,39.117,90.333)
C3': (72.524,42.575,90.840)
C1': (73.175,43.538,92.895)
C5': (71.367,40.670,92.130)
O4': (72.019,42.780,93.164)
C8: (74.709,42.413,94.588)
O2': (74.652,43.826,90.995)
C6: (75.841,45.000,96.691)
C5: (75.289,44.070,95.784)
C4: (74.392,44.558,94.851)
P: (72.931,38.748,91.243)
C4': (71.549,42.155,91.933)
C2': (73.781,42.921,91.638)
C2: (74.549,46.605,95.646)
N1: (75.439,46.281,96.596)
N3: (73.970,45.828,94.729)
N6: (76.737,44.692,97.627)
N7: (75.470,42.708,95.615)
N9: (74.047,43.488,94.064)
O5': (72.639,40.009,92.168)
O3': (71.981,43.713,90.190)
OP2: (74.049,39.117,90.333)
C3': (72.524,42.575,90.840)
C1': (73.175,43.538,92.895)
C5': (71.367,40.670,92.130)
O4': (72.019,42.780,93.164)
C8: (74.709,42.413,94.588)
O2': (74.652,43.826,90.995)
C6: (75.841,45.000,96.691)
C5: (75.289,44.070,95.784)
C4: (74.392,44.558,94.851)
P: (72.931,38.748,91.243)
C4': (71.549,42.155,91.933)
C2': (73.781,42.921,91.638)
C2: (74.549,46.605,95.646)
N1: (75.439,46.281,96.596)
N3: (73.970,45.828,94.729)
N6: (76.737,44.692,97.627)
N7: (75.470,42.708,95.615)
N9: (74.047,43.488,94.064)
O5': (72.639,40.009,92.168)
O3': (71.981,43.713,90.190)
Image (generated by PyMOL):