ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01952:01927

Extra

PDB:
ATOM 1 O3' G A1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 2 P C A1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 3 OP1 C A1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 4 OP2 C A1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 5 O5' C A1952 101.818 110.876 107.954 1.00 58.73 O
ATOM 6 C5' C A1952 101.741 109.770 108.884 1.00 59.51 C
ATOM 7 C4' C A1952 100.467 108.970 108.672 1.00 61.08 C
ATOM 8 O4' C A1952 99.307 109.800 108.944 1.00 62.39 O
ATOM 9 C3' C A1952 100.194 108.447 107.272 1.00 61.55 C
ATOM 10 O3' C A1952 100.917 107.255 107.004 1.00 64.30 O
ATOM 11 C2' C A1952 98.693 108.179 107.306 1.00 61.58 C
ATOM 12 O2' C A1952 98.335 106.955 107.911 1.00 60.89 O
ATOM 13 C1' C A1952 98.199 109.323 108.191 1.00 61.84 C
ATOM 14 N1 C A1952 97.603 110.431 107.423 1.00 61.96 N
ATOM 15 C2 C A1952 96.211 110.448 107.246 1.00 61.85 C
ATOM 16 O2 C A1952 95.522 109.548 107.758 1.00 63.42 O
ATOM 17 N3 C A1952 95.651 111.439 106.525 1.00 60.81 N
ATOM 18 C4 C A1952 96.416 112.390 105.992 1.00 61.66 C
ATOM 19 N4 C A1952 95.814 113.343 105.284 1.00 63.14 N
ATOM 20 C5 C A1952 97.832 112.405 106.162 1.00 61.36 C
ATOM 21 C6 C A1952 98.378 111.418 106.879 1.00 61.52 C
ATOM 22 P A A1953 101.440 106.963 105.513 1.00 66.41 P
ATOM 23 OP1 A A1953 100.274 106.757 104.610 1.00 65.62 O
ATOM 24 OP2 A A1953 102.495 105.912 105.617 1.00 65.98 O
ATOM 25 O5' A A1953 102.136 108.328 105.089 1.00 64.77 O
TER

ATOM 1 O3' U B1926 98.679 117.642 103.804 1.00 59.67 O
ATOM 2 P A B1927 97.472 116.836 104.493 1.00 60.25 P
ATOM 3 OP1 A B1927 97.740 115.398 104.262 1.00 59.22 O
ATOM 4 OP2 A B1927 96.181 117.424 104.063 1.00 61.24 O
ATOM 5 O5' A B1927 97.634 117.127 106.043 1.00 59.81 O
ATOM 6 C5' A B1927 98.755 116.622 106.748 1.00 60.98 C
ATOM 7 C4' A B1927 98.304 115.926 107.996 1.00 61.56 C
ATOM 8 O4' A B1927 99.466 115.332 108.631 1.00 64.22 O
ATOM 9 C3' A B1927 97.667 116.827 109.042 1.00 60.99 C
ATOM 10 O3' A B1927 96.758 116.036 109.793 1.00 60.88 O
ATOM 11 C2' A B1927 98.861 117.203 109.908 1.00 61.77 C
ATOM 12 O2' A B1927 98.487 117.566 111.217 1.00 63.42 O
ATOM 13 C1' A B1927 99.647 115.892 109.913 1.00 63.88 C
ATOM 14 N9 A B1927 101.083 116.052 110.138 1.00 66.18 N
ATOM 15 C8 A B1927 102.008 116.629 109.300 1.00 66.87 C
ATOM 16 N7 A B1927 103.222 116.658 109.792 1.00 67.89 N
ATOM 17 C5 A B1927 103.093 116.048 111.032 1.00 68.53 C
ATOM 18 C6 A B1927 104.019 115.775 112.047 1.00 69.61 C
ATOM 19 N6 A B1927 105.314 116.090 111.968 1.00 70.89 N
ATOM 20 N1 A B1927 103.567 115.159 113.163 1.00 70.42 N
ATOM 21 C2 A B1927 102.268 114.842 113.237 1.00 69.01 C
ATOM 22 N3 A B1927 101.299 115.046 112.348 1.00 68.70 N
ATOM 23 C4 A B1927 101.783 115.662 111.255 1.00 68.00 C
ATOM 24 P C B1928 95.249 116.530 110.017 1.00 60.57 P
ATOM 25 OP1 C B1928 94.787 117.144 108.746 1.00 59.91 O
ATOM 26 OP2 C B1928 95.221 117.323 111.275 1.00 59.22 O
ATOM 27 O5' C B1928 94.467 115.166 110.289 1.00 60.14 O
TER

Atoms:
C2: (96.211,110.448,107.246)
OP1: (101.343,113.293,107.588)
OP2: (101.915,112.426,109.924)
C4: (96.416,112.390,105.992)
O5': (101.818,110.876,107.954)
C3': (100.194,108.447,107.272)
C1': (98.199,109.323,108.191)
O4': (99.307,109.800,108.944)
C5': (101.741,109.770,108.884)
P: (102.101,112.366,108.456)
O2: (95.522,109.548,107.758)
C4': (100.467,108.970,108.672)
C2': (98.693,108.179,107.306)
O2': (98.335,106.955,107.911)
N1: (97.603,110.431,107.423)
N3: (95.651,111.439,106.525)
N4: (95.814,113.343,105.284)
C6: (98.378,111.418,106.879)
C5: (97.832,112.405,106.162)
O3': (100.917,107.255,107.004)
OP1: (97.740,115.398,104.262)
OP2: (96.181,117.424,104.063)
C3': (97.667,116.827,109.042)
C1': (99.647,115.892,109.913)
C5': (98.755,116.622,106.748)
O4': (99.466,115.332,108.631)
C8: (102.008,116.629,109.300)
O2': (98.487,117.566,111.217)
C6: (104.019,115.775,112.047)
C5: (103.093,116.048,111.032)
C4: (101.783,115.662,111.255)
P: (97.472,116.836,104.493)
C4': (98.304,115.926,107.996)
C2': (98.861,117.203,109.908)
C2: (102.268,114.842,113.237)
N1: (103.567,115.159,113.163)
N3: (101.299,115.046,112.348)
N6: (105.314,116.090,111.968)
N7: (103.222,116.658,109.792)
N9: (101.083,116.052,110.138)
O5': (97.634,117.127,106.043)
O3': (96.758,116.036,109.793)
Image (generated by PyMOL):
PyMOL image
show in jmol