Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:090:089
Extra
PDB:
ATOM 1 O3' A A 89 40.562 156.890 27.944 1.00 46.99 O
ATOM 2 P C A 90 41.775 155.852 27.766 1.00 46.04 P
ATOM 3 OP1 C A 90 42.520 155.876 29.045 1.00 47.95 O
ATOM 4 OP2 C A 90 42.488 156.127 26.497 1.00 48.28 O
ATOM 5 O5' C A 90 41.060 154.442 27.610 1.00 48.38 O
ATOM 6 C5' C A 90 40.121 153.975 28.590 1.00 49.84 C
ATOM 7 C4' C A 90 39.262 152.894 27.993 1.00 51.62 C
ATOM 8 O4' C A 90 38.386 153.472 26.987 1.00 53.93 O
ATOM 9 C3' C A 90 40.031 151.825 27.236 1.00 50.52 C
ATOM 10 O3' C A 90 40.585 150.857 28.107 1.00 48.45 O
ATOM 11 C2' C A 90 38.962 151.273 26.303 1.00 52.90 C
ATOM 12 O2' C A 90 38.039 150.419 26.955 1.00 51.39 O
ATOM 13 C1' C A 90 38.237 152.560 25.904 1.00 54.32 C
ATOM 14 N1 C A 90 38.789 153.186 24.681 1.00 57.11 N
ATOM 15 C2 C A 90 38.278 152.802 23.428 1.00 57.65 C
ATOM 16 O2 C A 90 37.398 151.933 23.375 1.00 60.44 O
ATOM 17 N3 C A 90 38.762 153.386 22.310 1.00 57.33 N
ATOM 18 C4 C A 90 39.721 154.308 22.400 1.00 56.90 C
ATOM 19 N4 C A 90 40.164 154.857 21.269 1.00 55.63 N
ATOM 20 C5 C A 90 40.268 154.710 23.655 1.00 57.45 C
ATOM 21 C6 C A 90 39.779 154.130 24.759 1.00 57.04 C
ATOM 22 P C A 91 42.010 150.198 27.763 1.00 50.14 P
ATOM 23 OP1 C A 91 42.400 149.395 28.951 1.00 51.41 O
ATOM 24 OP2 C A 91 42.934 151.237 27.256 1.00 49.91 O
ATOM 25 O5' C A 91 41.690 149.196 26.572 1.00 47.79 O
TER
ATOM 1 O3' A B 88 41.123 160.011 22.630 1.00 52.65 O
ATOM 2 P A B 89 41.562 158.523 23.046 1.00 52.91 P
ATOM 3 OP1 A B 89 42.950 158.587 23.561 1.00 54.02 O
ATOM 4 OP2 A B 89 41.249 157.614 21.918 1.00 53.77 O
ATOM 5 O5' A B 89 40.590 158.169 24.261 1.00 52.65 O
ATOM 6 C5' A B 89 40.604 158.960 25.468 1.00 49.82 C
ATOM 7 C4' A B 89 39.536 158.493 26.435 1.00 48.17 C
ATOM 8 O4' A B 89 38.230 158.575 25.806 1.00 48.68 O
ATOM 9 C3' A B 89 39.610 157.049 26.906 1.00 47.63 C
ATOM 10 O3' A B 89 40.562 156.890 27.944 1.00 46.99 O
ATOM 11 C2' A B 89 38.189 156.816 27.407 1.00 48.19 C
ATOM 12 O2' A B 89 37.946 157.396 28.672 1.00 47.81 O
ATOM 13 C1' A B 89 37.375 157.581 26.358 1.00 48.84 C
ATOM 14 N9 A B 89 36.907 156.707 25.280 1.00 47.57 N
ATOM 15 C8 A B 89 37.459 156.505 24.040 1.00 47.31 C
ATOM 16 N7 A B 89 36.817 155.625 23.313 1.00 47.57 N
ATOM 17 C5 A B 89 35.762 155.228 24.123 1.00 48.45 C
ATOM 18 C6 A B 89 34.708 154.306 23.934 1.00 49.03 C
ATOM 19 N6 A B 89 34.542 153.580 22.825 1.00 47.68 N
ATOM 20 N1 A B 89 33.821 154.152 24.943 1.00 48.26 N
ATOM 21 C2 A B 89 33.992 154.868 26.059 1.00 47.66 C
ATOM 22 N3 A B 89 34.941 155.755 26.357 1.00 47.50 N
ATOM 23 C4 A B 89 35.803 155.891 25.335 1.00 47.88 C
ATOM 24 P C B 90 41.775 155.852 27.766 1.00 46.04 P
ATOM 25 OP1 C B 90 42.520 155.876 29.045 1.00 47.95 O
ATOM 26 OP2 C B 90 42.488 156.127 26.497 1.00 48.28 O
ATOM 27 O5' C B 90 41.060 154.442 27.610 1.00 48.38 O
TER
ATOM 2 P C A 90 41.775 155.852 27.766 1.00 46.04 P
ATOM 3 OP1 C A 90 42.520 155.876 29.045 1.00 47.95 O
ATOM 4 OP2 C A 90 42.488 156.127 26.497 1.00 48.28 O
ATOM 5 O5' C A 90 41.060 154.442 27.610 1.00 48.38 O
ATOM 6 C5' C A 90 40.121 153.975 28.590 1.00 49.84 C
ATOM 7 C4' C A 90 39.262 152.894 27.993 1.00 51.62 C
ATOM 8 O4' C A 90 38.386 153.472 26.987 1.00 53.93 O
ATOM 9 C3' C A 90 40.031 151.825 27.236 1.00 50.52 C
ATOM 10 O3' C A 90 40.585 150.857 28.107 1.00 48.45 O
ATOM 11 C2' C A 90 38.962 151.273 26.303 1.00 52.90 C
ATOM 12 O2' C A 90 38.039 150.419 26.955 1.00 51.39 O
ATOM 13 C1' C A 90 38.237 152.560 25.904 1.00 54.32 C
ATOM 14 N1 C A 90 38.789 153.186 24.681 1.00 57.11 N
ATOM 15 C2 C A 90 38.278 152.802 23.428 1.00 57.65 C
ATOM 16 O2 C A 90 37.398 151.933 23.375 1.00 60.44 O
ATOM 17 N3 C A 90 38.762 153.386 22.310 1.00 57.33 N
ATOM 18 C4 C A 90 39.721 154.308 22.400 1.00 56.90 C
ATOM 19 N4 C A 90 40.164 154.857 21.269 1.00 55.63 N
ATOM 20 C5 C A 90 40.268 154.710 23.655 1.00 57.45 C
ATOM 21 C6 C A 90 39.779 154.130 24.759 1.00 57.04 C
ATOM 22 P C A 91 42.010 150.198 27.763 1.00 50.14 P
ATOM 23 OP1 C A 91 42.400 149.395 28.951 1.00 51.41 O
ATOM 24 OP2 C A 91 42.934 151.237 27.256 1.00 49.91 O
ATOM 25 O5' C A 91 41.690 149.196 26.572 1.00 47.79 O
TER
ATOM 1 O3' A B 88 41.123 160.011 22.630 1.00 52.65 O
ATOM 2 P A B 89 41.562 158.523 23.046 1.00 52.91 P
ATOM 3 OP1 A B 89 42.950 158.587 23.561 1.00 54.02 O
ATOM 4 OP2 A B 89 41.249 157.614 21.918 1.00 53.77 O
ATOM 5 O5' A B 89 40.590 158.169 24.261 1.00 52.65 O
ATOM 6 C5' A B 89 40.604 158.960 25.468 1.00 49.82 C
ATOM 7 C4' A B 89 39.536 158.493 26.435 1.00 48.17 C
ATOM 8 O4' A B 89 38.230 158.575 25.806 1.00 48.68 O
ATOM 9 C3' A B 89 39.610 157.049 26.906 1.00 47.63 C
ATOM 10 O3' A B 89 40.562 156.890 27.944 1.00 46.99 O
ATOM 11 C2' A B 89 38.189 156.816 27.407 1.00 48.19 C
ATOM 12 O2' A B 89 37.946 157.396 28.672 1.00 47.81 O
ATOM 13 C1' A B 89 37.375 157.581 26.358 1.00 48.84 C
ATOM 14 N9 A B 89 36.907 156.707 25.280 1.00 47.57 N
ATOM 15 C8 A B 89 37.459 156.505 24.040 1.00 47.31 C
ATOM 16 N7 A B 89 36.817 155.625 23.313 1.00 47.57 N
ATOM 17 C5 A B 89 35.762 155.228 24.123 1.00 48.45 C
ATOM 18 C6 A B 89 34.708 154.306 23.934 1.00 49.03 C
ATOM 19 N6 A B 89 34.542 153.580 22.825 1.00 47.68 N
ATOM 20 N1 A B 89 33.821 154.152 24.943 1.00 48.26 N
ATOM 21 C2 A B 89 33.992 154.868 26.059 1.00 47.66 C
ATOM 22 N3 A B 89 34.941 155.755 26.357 1.00 47.50 N
ATOM 23 C4 A B 89 35.803 155.891 25.335 1.00 47.88 C
ATOM 24 P C B 90 41.775 155.852 27.766 1.00 46.04 P
ATOM 25 OP1 C B 90 42.520 155.876 29.045 1.00 47.95 O
ATOM 26 OP2 C B 90 42.488 156.127 26.497 1.00 48.28 O
ATOM 27 O5' C B 90 41.060 154.442 27.610 1.00 48.38 O
TER
Atoms:
C2: (38.278,152.802,23.428)
OP1: (42.520,155.876,29.045)
OP2: (42.488,156.127,26.497)
C4: (39.721,154.308,22.400)
O5': (41.060,154.442,27.610)
C3': (40.031,151.825,27.236)
C1': (38.237,152.560,25.904)
O4': (38.386,153.472,26.987)
C5': (40.121,153.975,28.590)
P: (41.775,155.852,27.766)
O2: (37.398,151.933,23.375)
C4': (39.262,152.894,27.993)
C2': (38.962,151.273,26.303)
O2': (38.039,150.419,26.955)
N1: (38.789,153.186,24.681)
N3: (38.762,153.386,22.310)
N4: (40.164,154.857,21.269)
C6: (39.779,154.130,24.759)
C5: (40.268,154.710,23.655)
O3': (40.585,150.857,28.107)
OP1: (42.520,155.876,29.045)
OP2: (42.488,156.127,26.497)
C4: (39.721,154.308,22.400)
O5': (41.060,154.442,27.610)
C3': (40.031,151.825,27.236)
C1': (38.237,152.560,25.904)
O4': (38.386,153.472,26.987)
C5': (40.121,153.975,28.590)
P: (41.775,155.852,27.766)
O2: (37.398,151.933,23.375)
C4': (39.262,152.894,27.993)
C2': (38.962,151.273,26.303)
O2': (38.039,150.419,26.955)
N1: (38.789,153.186,24.681)
N3: (38.762,153.386,22.310)
N4: (40.164,154.857,21.269)
C6: (39.779,154.130,24.759)
C5: (40.268,154.710,23.655)
O3': (40.585,150.857,28.107)
OP1: (42.950,158.587,23.561)
OP2: (41.249,157.614,21.918)
C3': (39.610,157.049,26.906)
C1': (37.375,157.581,26.358)
C5': (40.604,158.960,25.468)
O4': (38.230,158.575,25.806)
C8: (37.459,156.505,24.040)
O2': (37.946,157.396,28.672)
C6: (34.708,154.306,23.934)
C5: (35.762,155.228,24.123)
C4: (35.803,155.891,25.335)
P: (41.562,158.523,23.046)
C4': (39.536,158.493,26.435)
C2': (38.189,156.816,27.407)
C2: (33.992,154.868,26.059)
N1: (33.821,154.152,24.943)
N3: (34.941,155.755,26.357)
N6: (34.542,153.580,22.825)
N7: (36.817,155.625,23.313)
N9: (36.907,156.707,25.280)
O5': (40.590,158.169,24.261)
O3': (40.562,156.890,27.944)
OP2: (41.249,157.614,21.918)
C3': (39.610,157.049,26.906)
C1': (37.375,157.581,26.358)
C5': (40.604,158.960,25.468)
O4': (38.230,158.575,25.806)
C8: (37.459,156.505,24.040)
O2': (37.946,157.396,28.672)
C6: (34.708,154.306,23.934)
C5: (35.762,155.228,24.123)
C4: (35.803,155.891,25.335)
P: (41.562,158.523,23.046)
C4': (39.536,158.493,26.435)
C2': (38.189,156.816,27.407)
C2: (33.992,154.868,26.059)
N1: (33.821,154.152,24.943)
N3: (34.941,155.755,26.357)
N6: (34.542,153.580,22.825)
N7: (36.817,155.625,23.313)
N9: (36.907,156.707,25.280)
O5': (40.590,158.169,24.261)
O3': (40.562,156.890,27.944)
Image (generated by PyMOL):