Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A366:A398
Extra
PDB:
ATOM 1 O3' C A 365 92.631 102.299 6.138 1.00 68.83 O
ATOM 2 P A A 366 92.799 101.733 7.647 1.00 68.94 P
ATOM 3 OP1 A A 366 93.572 102.811 8.310 1.00 69.47 O
ATOM 4 OP2 A A 366 93.316 100.332 7.687 1.00 67.45 O
ATOM 5 O5' A A 366 91.323 101.703 8.252 1.00 68.49 O
ATOM 6 C5' A A 366 90.494 102.893 8.271 1.00 69.15 C
ATOM 7 C4' A A 366 89.077 102.550 8.703 1.00 68.81 C
ATOM 8 O4' A A 366 88.387 101.851 7.634 1.00 68.97 O
ATOM 9 C3' A A 366 88.915 101.649 9.927 1.00 69.13 C
ATOM 10 O3' A A 366 89.016 102.374 11.159 1.00 67.76 O
ATOM 11 C2' A A 366 87.519 101.081 9.720 1.00 69.49 C
ATOM 12 O2' A A 366 86.540 102.007 10.161 1.00 69.91 O
ATOM 13 C1' A A 366 87.478 100.917 8.191 1.00 69.99 C
ATOM 14 N9 A A 366 87.811 99.575 7.685 1.00 70.56 N
ATOM 15 C8 A A 366 89.048 99.020 7.421 1.00 69.87 C
ATOM 16 N7 A A 366 88.993 97.772 7.013 1.00 69.87 N
ATOM 17 C5 A A 366 87.631 97.481 7.006 1.00 71.16 C
ATOM 18 C6 A A 366 86.896 96.306 6.699 1.00 72.17 C
ATOM 19 N6 A A 366 87.453 95.135 6.366 1.00 73.85 N
ATOM 20 N1 A A 366 85.544 96.377 6.768 1.00 72.38 N
ATOM 21 C2 A A 366 84.977 97.533 7.139 1.00 72.02 C
ATOM 22 N3 A A 366 85.551 98.684 7.474 1.00 71.42 N
ATOM 23 C4 A A 366 86.893 98.592 7.391 1.00 70.86 C
ATOM 24 P G A 367 89.392 101.594 12.519 1.00 67.12 P
ATOM 25 OP1 G A 367 90.629 100.795 12.278 1.00 66.63 O
ATOM 26 OP2 G A 367 88.153 100.906 12.996 1.00 68.24 O
ATOM 27 O5' G A 367 89.750 102.757 13.548 1.00 65.55 O
TER
ATOM 1 O3' U B 397 92.841 93.052 9.613 1.00 75.70 O
ATOM 2 P A B 398 92.681 92.767 8.045 1.00 76.07 P
ATOM 3 OP1 A B 398 93.716 91.778 7.643 1.00 75.84 O
ATOM 4 OP2 A B 398 92.531 94.032 7.276 1.00 75.26 O
ATOM 5 O5' A B 398 91.287 92.017 8.011 1.00 76.85 O
ATOM 6 C5' A B 398 91.132 90.777 8.720 1.00 77.97 C
ATOM 7 C4' A B 398 89.683 90.392 8.774 1.00 78.82 C
ATOM 8 O4' A B 398 88.996 91.291 9.692 1.00 79.27 O
ATOM 9 C3' A B 398 88.962 90.520 7.430 1.00 78.86 C
ATOM 10 O3' A B 398 87.959 89.522 7.297 1.00 79.35 O
ATOM 11 C2' A B 398 88.305 91.891 7.543 1.00 78.65 C
ATOM 12 O2' A B 398 87.150 92.069 6.748 1.00 77.73 O
ATOM 13 C1' A B 398 87.920 91.903 9.014 1.00 79.63 C
ATOM 14 N9 A B 398 87.736 93.258 9.510 1.00 80.94 N
ATOM 15 C8 A B 398 88.663 94.250 9.714 1.00 81.39 C
ATOM 16 N7 A B 398 88.141 95.379 10.127 1.00 81.85 N
ATOM 17 C5 A B 398 86.781 95.104 10.215 1.00 82.32 C
ATOM 18 C6 A B 398 85.675 95.887 10.601 1.00 82.68 C
ATOM 19 N6 A B 398 85.771 97.160 10.994 1.00 81.86 N
ATOM 20 N1 A B 398 84.449 95.306 10.569 1.00 83.09 N
ATOM 21 C2 A B 398 84.354 94.024 10.178 1.00 82.85 C
ATOM 22 N3 A B 398 85.318 93.188 9.798 1.00 81.91 N
ATOM 23 C4 A B 398 86.521 93.798 9.841 1.00 81.85 C
ATOM 24 P A B 399 88.142 88.352 6.212 1.00 78.76 P
ATOM 25 OP1 A B 399 88.672 88.939 4.946 1.00 78.58 O
ATOM 26 OP2 A B 399 86.878 87.564 6.182 1.00 78.47 O
ATOM 27 O5' A B 399 89.292 87.455 6.848 1.00 78.96 O
TER
ATOM 2 P A A 366 92.799 101.733 7.647 1.00 68.94 P
ATOM 3 OP1 A A 366 93.572 102.811 8.310 1.00 69.47 O
ATOM 4 OP2 A A 366 93.316 100.332 7.687 1.00 67.45 O
ATOM 5 O5' A A 366 91.323 101.703 8.252 1.00 68.49 O
ATOM 6 C5' A A 366 90.494 102.893 8.271 1.00 69.15 C
ATOM 7 C4' A A 366 89.077 102.550 8.703 1.00 68.81 C
ATOM 8 O4' A A 366 88.387 101.851 7.634 1.00 68.97 O
ATOM 9 C3' A A 366 88.915 101.649 9.927 1.00 69.13 C
ATOM 10 O3' A A 366 89.016 102.374 11.159 1.00 67.76 O
ATOM 11 C2' A A 366 87.519 101.081 9.720 1.00 69.49 C
ATOM 12 O2' A A 366 86.540 102.007 10.161 1.00 69.91 O
ATOM 13 C1' A A 366 87.478 100.917 8.191 1.00 69.99 C
ATOM 14 N9 A A 366 87.811 99.575 7.685 1.00 70.56 N
ATOM 15 C8 A A 366 89.048 99.020 7.421 1.00 69.87 C
ATOM 16 N7 A A 366 88.993 97.772 7.013 1.00 69.87 N
ATOM 17 C5 A A 366 87.631 97.481 7.006 1.00 71.16 C
ATOM 18 C6 A A 366 86.896 96.306 6.699 1.00 72.17 C
ATOM 19 N6 A A 366 87.453 95.135 6.366 1.00 73.85 N
ATOM 20 N1 A A 366 85.544 96.377 6.768 1.00 72.38 N
ATOM 21 C2 A A 366 84.977 97.533 7.139 1.00 72.02 C
ATOM 22 N3 A A 366 85.551 98.684 7.474 1.00 71.42 N
ATOM 23 C4 A A 366 86.893 98.592 7.391 1.00 70.86 C
ATOM 24 P G A 367 89.392 101.594 12.519 1.00 67.12 P
ATOM 25 OP1 G A 367 90.629 100.795 12.278 1.00 66.63 O
ATOM 26 OP2 G A 367 88.153 100.906 12.996 1.00 68.24 O
ATOM 27 O5' G A 367 89.750 102.757 13.548 1.00 65.55 O
TER
ATOM 1 O3' U B 397 92.841 93.052 9.613 1.00 75.70 O
ATOM 2 P A B 398 92.681 92.767 8.045 1.00 76.07 P
ATOM 3 OP1 A B 398 93.716 91.778 7.643 1.00 75.84 O
ATOM 4 OP2 A B 398 92.531 94.032 7.276 1.00 75.26 O
ATOM 5 O5' A B 398 91.287 92.017 8.011 1.00 76.85 O
ATOM 6 C5' A B 398 91.132 90.777 8.720 1.00 77.97 C
ATOM 7 C4' A B 398 89.683 90.392 8.774 1.00 78.82 C
ATOM 8 O4' A B 398 88.996 91.291 9.692 1.00 79.27 O
ATOM 9 C3' A B 398 88.962 90.520 7.430 1.00 78.86 C
ATOM 10 O3' A B 398 87.959 89.522 7.297 1.00 79.35 O
ATOM 11 C2' A B 398 88.305 91.891 7.543 1.00 78.65 C
ATOM 12 O2' A B 398 87.150 92.069 6.748 1.00 77.73 O
ATOM 13 C1' A B 398 87.920 91.903 9.014 1.00 79.63 C
ATOM 14 N9 A B 398 87.736 93.258 9.510 1.00 80.94 N
ATOM 15 C8 A B 398 88.663 94.250 9.714 1.00 81.39 C
ATOM 16 N7 A B 398 88.141 95.379 10.127 1.00 81.85 N
ATOM 17 C5 A B 398 86.781 95.104 10.215 1.00 82.32 C
ATOM 18 C6 A B 398 85.675 95.887 10.601 1.00 82.68 C
ATOM 19 N6 A B 398 85.771 97.160 10.994 1.00 81.86 N
ATOM 20 N1 A B 398 84.449 95.306 10.569 1.00 83.09 N
ATOM 21 C2 A B 398 84.354 94.024 10.178 1.00 82.85 C
ATOM 22 N3 A B 398 85.318 93.188 9.798 1.00 81.91 N
ATOM 23 C4 A B 398 86.521 93.798 9.841 1.00 81.85 C
ATOM 24 P A B 399 88.142 88.352 6.212 1.00 78.76 P
ATOM 25 OP1 A B 399 88.672 88.939 4.946 1.00 78.58 O
ATOM 26 OP2 A B 399 86.878 87.564 6.182 1.00 78.47 O
ATOM 27 O5' A B 399 89.292 87.455 6.848 1.00 78.96 O
TER
Atoms:
OP1: (93.572,102.811,8.310)
OP2: (93.316,100.332,7.687)
C3': (88.915,101.649,9.927)
C1': (87.478,100.917,8.191)
C5': (90.494,102.893,8.271)
O4': (88.387,101.851,7.634)
C8: (89.048,99.020,7.421)
O2': (86.540,102.007,10.161)
C6: (86.896,96.306,6.699)
C5: (87.631,97.481,7.006)
C4: (86.893,98.592,7.391)
P: (92.799,101.733,7.647)
C4': (89.077,102.550,8.703)
C2': (87.519,101.081,9.720)
C2: (84.977,97.533,7.139)
N1: (85.544,96.377,6.768)
N3: (85.551,98.684,7.474)
N6: (87.453,95.135,6.366)
N7: (88.993,97.772,7.013)
N9: (87.811,99.575,7.685)
O5': (91.323,101.703,8.252)
O3': (89.016,102.374,11.159)
OP2: (93.316,100.332,7.687)
C3': (88.915,101.649,9.927)
C1': (87.478,100.917,8.191)
C5': (90.494,102.893,8.271)
O4': (88.387,101.851,7.634)
C8: (89.048,99.020,7.421)
O2': (86.540,102.007,10.161)
C6: (86.896,96.306,6.699)
C5: (87.631,97.481,7.006)
C4: (86.893,98.592,7.391)
P: (92.799,101.733,7.647)
C4': (89.077,102.550,8.703)
C2': (87.519,101.081,9.720)
C2: (84.977,97.533,7.139)
N1: (85.544,96.377,6.768)
N3: (85.551,98.684,7.474)
N6: (87.453,95.135,6.366)
N7: (88.993,97.772,7.013)
N9: (87.811,99.575,7.685)
O5': (91.323,101.703,8.252)
O3': (89.016,102.374,11.159)
OP1: (93.716,91.778,7.643)
OP2: (92.531,94.032,7.276)
C3': (88.962,90.520,7.430)
C1': (87.920,91.903,9.014)
C5': (91.132,90.777,8.720)
O4': (88.996,91.291,9.692)
C8: (88.663,94.250,9.714)
O2': (87.150,92.069,6.748)
C6: (85.675,95.887,10.601)
C5: (86.781,95.104,10.215)
C4: (86.521,93.798,9.841)
P: (92.681,92.767,8.045)
C4': (89.683,90.392,8.774)
C2': (88.305,91.891,7.543)
C2: (84.354,94.024,10.178)
N1: (84.449,95.306,10.569)
N3: (85.318,93.188,9.798)
N6: (85.771,97.160,10.994)
N7: (88.141,95.379,10.127)
N9: (87.736,93.258,9.510)
O5': (91.287,92.017,8.011)
O3': (87.959,89.522,7.297)
OP2: (92.531,94.032,7.276)
C3': (88.962,90.520,7.430)
C1': (87.920,91.903,9.014)
C5': (91.132,90.777,8.720)
O4': (88.996,91.291,9.692)
C8: (88.663,94.250,9.714)
O2': (87.150,92.069,6.748)
C6: (85.675,95.887,10.601)
C5: (86.781,95.104,10.215)
C4: (86.521,93.798,9.841)
P: (92.681,92.767,8.045)
C4': (89.683,90.392,8.774)
C2': (88.305,91.891,7.543)
C2: (84.354,94.024,10.178)
N1: (84.449,95.306,10.569)
N3: (85.318,93.188,9.798)
N6: (85.771,97.160,10.994)
N7: (88.141,95.379,10.127)
N9: (87.736,93.258,9.510)
O5': (91.287,92.017,8.011)
O3': (87.959,89.522,7.297)
Image (generated by PyMOL):