Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2040:A2039
Extra
PDB:
ATOM 1 O3' A A2039 57.104 -11.198 -66.591 1.00 54.01 O
ATOM 2 P C A2040 55.828 -11.733 -65.775 1.00 53.19 P
ATOM 3 OP1 C A2040 55.112 -12.653 -66.661 1.00 61.68 O
ATOM 4 OP2 C A2040 55.114 -10.561 -65.206 1.00 37.18 O
ATOM 5 O5' C A2040 56.506 -12.527 -64.602 1.00 73.69 O
ATOM 6 C5' C A2040 56.396 -12.054 -63.282 1.00 60.65 C
ATOM 7 C4' C A2040 57.722 -12.012 -62.594 1.00 43.95 C
ATOM 8 O4' C A2040 58.579 -11.047 -63.249 1.00 44.29 O
ATOM 9 C3' C A2040 57.662 -11.550 -61.153 1.00 50.88 C
ATOM 10 O3' C A2040 57.364 -12.597 -60.270 1.00 49.19 O
ATOM 11 C2' C A2040 59.018 -10.916 -60.946 1.00 48.42 C
ATOM 12 O2' C A2040 60.031 -11.910 -60.827 1.00 54.18 O
ATOM 13 C1' C A2040 59.182 -10.221 -62.288 1.00 46.92 C
ATOM 14 N1 C A2040 58.471 -8.955 -62.318 1.00 43.82 N
ATOM 15 C2 C A2040 58.612 -8.038 -61.306 1.00 46.54 C
ATOM 16 O2 C A2040 59.354 -8.292 -60.379 1.00 54.25 O
ATOM 17 N3 C A2040 57.943 -6.885 -61.349 1.00 48.47 N
ATOM 18 C4 C A2040 57.140 -6.650 -62.370 1.00 51.95 C
ATOM 19 N4 C A2040 56.505 -5.480 -62.366 1.00 52.81 N
ATOM 20 C5 C A2040 56.954 -7.589 -63.429 1.00 55.99 C
ATOM 21 C6 C A2040 57.633 -8.729 -63.357 1.00 50.17 C
ATOM 22 P C A2041 55.841 -13.079 -60.079 1.00 56.26 P
ATOM 23 OP1 C A2041 55.791 -14.534 -60.436 1.00 43.86 O
ATOM 24 OP2 C A2041 54.966 -12.137 -60.797 1.00 52.09 O
ATOM 25 O5' C A2041 55.651 -12.878 -58.534 1.00 49.95 O
TER
ATOM 1 O3' A B2038 55.262 -4.980 -67.283 1.00 46.98 O
ATOM 2 P A B2039 54.479 -6.182 -66.568 1.00 47.34 P
ATOM 3 OP1 A B2039 53.024 -5.953 -66.718 1.00 53.89 O
ATOM 4 OP2 A B2039 55.037 -6.328 -65.211 1.00 48.87 O
ATOM 5 O5' A B2039 54.923 -7.391 -67.469 1.00 49.22 O
ATOM 6 C5' A B2039 55.354 -8.587 -66.896 1.00 46.98 C
ATOM 7 C4' A B2039 56.680 -8.986 -67.424 1.00 36.70 C
ATOM 8 O4' A B2039 57.491 -7.816 -67.618 1.00 46.38 O
ATOM 9 C3' A B2039 57.474 -9.848 -66.490 1.00 48.80 C
ATOM 10 O3' A B2039 57.104 -11.198 -66.591 1.00 54.01 O
ATOM 11 C2' A B2039 58.914 -9.551 -66.871 1.00 48.50 C
ATOM 12 O2' A B2039 59.282 -10.263 -68.045 1.00 43.07 O
ATOM 13 C1' A B2039 58.813 -8.067 -67.209 1.00 48.59 C
ATOM 14 N9 A B2039 59.098 -7.201 -66.049 1.00 46.11 N
ATOM 15 C8 A B2039 58.468 -6.007 -65.812 1.00 47.11 C
ATOM 16 N7 A B2039 58.875 -5.376 -64.740 1.00 50.40 N
ATOM 17 C5 A B2039 59.851 -6.218 -64.232 1.00 46.59 C
ATOM 18 C6 A B2039 60.661 -6.106 -63.102 1.00 47.18 C
ATOM 19 N6 A B2039 60.628 -5.077 -62.252 1.00 50.82 N
ATOM 20 N1 A B2039 61.514 -7.105 -62.866 1.00 47.24 N
ATOM 21 C2 A B2039 61.543 -8.137 -63.705 1.00 47.01 C
ATOM 22 N3 A B2039 60.834 -8.357 -64.800 1.00 46.61 N
ATOM 23 C4 A B2039 59.997 -7.343 -65.021 1.00 43.47 C
ATOM 24 P C B2040 55.828 -11.733 -65.775 1.00 53.19 P
ATOM 25 OP1 C B2040 55.112 -12.653 -66.661 1.00 61.68 O
ATOM 26 OP2 C B2040 55.114 -10.561 -65.206 1.00 37.18 O
ATOM 27 O5' C B2040 56.506 -12.527 -64.602 1.00 73.69 O
TER
ATOM 2 P C A2040 55.828 -11.733 -65.775 1.00 53.19 P
ATOM 3 OP1 C A2040 55.112 -12.653 -66.661 1.00 61.68 O
ATOM 4 OP2 C A2040 55.114 -10.561 -65.206 1.00 37.18 O
ATOM 5 O5' C A2040 56.506 -12.527 -64.602 1.00 73.69 O
ATOM 6 C5' C A2040 56.396 -12.054 -63.282 1.00 60.65 C
ATOM 7 C4' C A2040 57.722 -12.012 -62.594 1.00 43.95 C
ATOM 8 O4' C A2040 58.579 -11.047 -63.249 1.00 44.29 O
ATOM 9 C3' C A2040 57.662 -11.550 -61.153 1.00 50.88 C
ATOM 10 O3' C A2040 57.364 -12.597 -60.270 1.00 49.19 O
ATOM 11 C2' C A2040 59.018 -10.916 -60.946 1.00 48.42 C
ATOM 12 O2' C A2040 60.031 -11.910 -60.827 1.00 54.18 O
ATOM 13 C1' C A2040 59.182 -10.221 -62.288 1.00 46.92 C
ATOM 14 N1 C A2040 58.471 -8.955 -62.318 1.00 43.82 N
ATOM 15 C2 C A2040 58.612 -8.038 -61.306 1.00 46.54 C
ATOM 16 O2 C A2040 59.354 -8.292 -60.379 1.00 54.25 O
ATOM 17 N3 C A2040 57.943 -6.885 -61.349 1.00 48.47 N
ATOM 18 C4 C A2040 57.140 -6.650 -62.370 1.00 51.95 C
ATOM 19 N4 C A2040 56.505 -5.480 -62.366 1.00 52.81 N
ATOM 20 C5 C A2040 56.954 -7.589 -63.429 1.00 55.99 C
ATOM 21 C6 C A2040 57.633 -8.729 -63.357 1.00 50.17 C
ATOM 22 P C A2041 55.841 -13.079 -60.079 1.00 56.26 P
ATOM 23 OP1 C A2041 55.791 -14.534 -60.436 1.00 43.86 O
ATOM 24 OP2 C A2041 54.966 -12.137 -60.797 1.00 52.09 O
ATOM 25 O5' C A2041 55.651 -12.878 -58.534 1.00 49.95 O
TER
ATOM 1 O3' A B2038 55.262 -4.980 -67.283 1.00 46.98 O
ATOM 2 P A B2039 54.479 -6.182 -66.568 1.00 47.34 P
ATOM 3 OP1 A B2039 53.024 -5.953 -66.718 1.00 53.89 O
ATOM 4 OP2 A B2039 55.037 -6.328 -65.211 1.00 48.87 O
ATOM 5 O5' A B2039 54.923 -7.391 -67.469 1.00 49.22 O
ATOM 6 C5' A B2039 55.354 -8.587 -66.896 1.00 46.98 C
ATOM 7 C4' A B2039 56.680 -8.986 -67.424 1.00 36.70 C
ATOM 8 O4' A B2039 57.491 -7.816 -67.618 1.00 46.38 O
ATOM 9 C3' A B2039 57.474 -9.848 -66.490 1.00 48.80 C
ATOM 10 O3' A B2039 57.104 -11.198 -66.591 1.00 54.01 O
ATOM 11 C2' A B2039 58.914 -9.551 -66.871 1.00 48.50 C
ATOM 12 O2' A B2039 59.282 -10.263 -68.045 1.00 43.07 O
ATOM 13 C1' A B2039 58.813 -8.067 -67.209 1.00 48.59 C
ATOM 14 N9 A B2039 59.098 -7.201 -66.049 1.00 46.11 N
ATOM 15 C8 A B2039 58.468 -6.007 -65.812 1.00 47.11 C
ATOM 16 N7 A B2039 58.875 -5.376 -64.740 1.00 50.40 N
ATOM 17 C5 A B2039 59.851 -6.218 -64.232 1.00 46.59 C
ATOM 18 C6 A B2039 60.661 -6.106 -63.102 1.00 47.18 C
ATOM 19 N6 A B2039 60.628 -5.077 -62.252 1.00 50.82 N
ATOM 20 N1 A B2039 61.514 -7.105 -62.866 1.00 47.24 N
ATOM 21 C2 A B2039 61.543 -8.137 -63.705 1.00 47.01 C
ATOM 22 N3 A B2039 60.834 -8.357 -64.800 1.00 46.61 N
ATOM 23 C4 A B2039 59.997 -7.343 -65.021 1.00 43.47 C
ATOM 24 P C B2040 55.828 -11.733 -65.775 1.00 53.19 P
ATOM 25 OP1 C B2040 55.112 -12.653 -66.661 1.00 61.68 O
ATOM 26 OP2 C B2040 55.114 -10.561 -65.206 1.00 37.18 O
ATOM 27 O5' C B2040 56.506 -12.527 -64.602 1.00 73.69 O
TER
Atoms:
C2: (58.612,-8.038,-61.306)
OP1: (55.112,-12.653,-66.661)
OP2: (55.114,-10.561,-65.206)
C4: (57.140,-6.650,-62.370)
O5': (56.506,-12.527,-64.602)
C3': (57.662,-11.550,-61.153)
C1': (59.182,-10.221,-62.288)
O4': (58.579,-11.047,-63.249)
C5': (56.396,-12.054,-63.282)
P: (55.828,-11.733,-65.775)
O2: (59.354,-8.292,-60.379)
C4': (57.722,-12.012,-62.594)
C2': (59.018,-10.916,-60.946)
O2': (60.031,-11.910,-60.827)
N1: (58.471,-8.955,-62.318)
N3: (57.943,-6.885,-61.349)
N4: (56.505,-5.480,-62.366)
C6: (57.633,-8.729,-63.357)
C5: (56.954,-7.589,-63.429)
O3': (57.364,-12.597,-60.270)
OP1: (55.112,-12.653,-66.661)
OP2: (55.114,-10.561,-65.206)
C4: (57.140,-6.650,-62.370)
O5': (56.506,-12.527,-64.602)
C3': (57.662,-11.550,-61.153)
C1': (59.182,-10.221,-62.288)
O4': (58.579,-11.047,-63.249)
C5': (56.396,-12.054,-63.282)
P: (55.828,-11.733,-65.775)
O2: (59.354,-8.292,-60.379)
C4': (57.722,-12.012,-62.594)
C2': (59.018,-10.916,-60.946)
O2': (60.031,-11.910,-60.827)
N1: (58.471,-8.955,-62.318)
N3: (57.943,-6.885,-61.349)
N4: (56.505,-5.480,-62.366)
C6: (57.633,-8.729,-63.357)
C5: (56.954,-7.589,-63.429)
O3': (57.364,-12.597,-60.270)
OP1: (53.024,-5.953,-66.718)
OP2: (55.037,-6.328,-65.211)
C3': (57.474,-9.848,-66.490)
C1': (58.813,-8.067,-67.209)
C5': (55.354,-8.587,-66.896)
O4': (57.491,-7.816,-67.618)
C8: (58.468,-6.007,-65.812)
O2': (59.282,-10.263,-68.045)
C6: (60.661,-6.106,-63.102)
C5: (59.851,-6.218,-64.232)
C4: (59.997,-7.343,-65.021)
P: (54.479,-6.182,-66.568)
C4': (56.680,-8.986,-67.424)
C2': (58.914,-9.551,-66.871)
C2: (61.543,-8.137,-63.705)
N1: (61.514,-7.105,-62.866)
N3: (60.834,-8.357,-64.800)
N6: (60.628,-5.077,-62.252)
N7: (58.875,-5.376,-64.740)
N9: (59.098,-7.201,-66.049)
O5': (54.923,-7.391,-67.469)
O3': (57.104,-11.198,-66.591)
OP2: (55.037,-6.328,-65.211)
C3': (57.474,-9.848,-66.490)
C1': (58.813,-8.067,-67.209)
C5': (55.354,-8.587,-66.896)
O4': (57.491,-7.816,-67.618)
C8: (58.468,-6.007,-65.812)
O2': (59.282,-10.263,-68.045)
C6: (60.661,-6.106,-63.102)
C5: (59.851,-6.218,-64.232)
C4: (59.997,-7.343,-65.021)
P: (54.479,-6.182,-66.568)
C4': (56.680,-8.986,-67.424)
C2': (58.914,-9.551,-66.871)
C2: (61.543,-8.137,-63.705)
N1: (61.514,-7.105,-62.866)
N3: (60.834,-8.357,-64.800)
N6: (60.628,-5.077,-62.252)
N7: (58.875,-5.376,-64.740)
N9: (59.098,-7.201,-66.049)
O5': (54.923,-7.391,-67.469)
O3': (57.104,-11.198,-66.591)
Image (generated by PyMOL):