Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KFU:N12:N8
Extra
PDB:
ATOM 1 O3' U A 11 1.516 -30.209 55.173 1.00 58.59 O
ATOM 2 P C A 12 0.460 -29.052 54.823 1.00 84.62 P
ATOM 3 OP1 C A 12 0.767 -28.577 53.450 1.00129.62 O
ATOM 4 OP2 C A 12 0.495 -28.075 55.939 1.00 28.61 O
ATOM 5 O5' C A 12 -0.921 -29.842 54.830 1.00 86.17 O
ATOM 6 C5' C A 12 -2.126 -29.211 55.238 1.00 78.02 C
ATOM 7 C4' C A 12 -3.310 -30.132 55.090 1.00108.03 C
ATOM 8 O4' C A 12 -3.218 -31.197 56.081 1.00 32.82 O
ATOM 9 C3' C A 12 -4.666 -29.470 55.302 1.00 95.62 C
ATOM 10 O3' C A 12 -5.635 -30.092 54.468 1.00 55.94 O
ATOM 11 C2' C A 12 -4.969 -29.792 56.756 1.00141.77 C
ATOM 12 O2' C A 12 -6.338 -29.764 57.091 1.00171.84 O
ATOM 13 C1' C A 12 -4.377 -31.193 56.890 1.00 72.36 C
ATOM 14 N1 C A 12 -3.983 -31.532 58.269 1.00 88.87 N
ATOM 15 C2 C A 12 -4.408 -32.731 58.837 1.00 66.91 C
ATOM 16 O2 C A 12 -5.085 -33.512 58.158 1.00 83.84 O
ATOM 17 N3 C A 12 -4.059 -33.009 60.110 1.00 76.13 N
ATOM 18 C4 C A 12 -3.327 -32.139 60.807 1.00 84.75 C
ATOM 19 N4 C A 12 -3.000 -32.454 62.061 1.00100.65 N
ATOM 20 C5 C A 12 -2.890 -30.904 60.256 1.00 99.01 C
ATOM 21 C6 C A 12 -3.245 -30.641 58.996 1.00123.97 C
ATOM 22 P A A 13 -6.966 -29.299 54.061 1.00105.80 P
ATOM 23 OP1 A A 13 -6.900 -29.055 52.599 1.00173.72 O
ATOM 24 OP2 A A 13 -7.071 -28.138 54.973 1.00 63.33 O
ATOM 25 O5' A A 13 -8.116 -30.349 54.385 1.00129.13 O
TER
ATOM 1 O3' U B 7 -3.392 -29.634 66.725 1.00 38.17 O
ATOM 2 P A B 8 -2.128 -30.487 66.229 1.00 61.00 P
ATOM 3 OP1 A B 8 -0.913 -29.792 66.721 1.00 68.36 O
ATOM 4 OP2 A B 8 -2.287 -30.699 64.771 1.00 52.69 O
ATOM 5 O5' A B 8 -2.311 -31.867 66.996 1.00 74.13 O
ATOM 6 C5' A B 8 -2.087 -31.958 68.397 1.00 48.44 C
ATOM 7 C4' A B 8 -1.429 -33.260 68.767 1.00 30.71 C
ATOM 8 O4' A B 8 -2.314 -34.356 68.405 1.00 57.86 O
ATOM 9 C3' A B 8 -0.097 -33.536 68.071 1.00 35.94 C
ATOM 10 O3' A B 8 0.780 -34.213 68.971 1.00 63.99 O
ATOM 11 C2' A B 8 -0.499 -34.478 66.937 1.00 48.95 C
ATOM 12 O2' A B 8 0.538 -35.314 66.469 1.00 56.65 O
ATOM 13 C1' A B 8 -1.619 -35.276 67.591 1.00 58.11 C
ATOM 14 N9 A B 8 -2.570 -35.867 66.647 1.00 36.82 N
ATOM 15 C8 A B 8 -2.667 -35.655 65.297 1.00 43.67 C
ATOM 16 N7 A B 8 -3.618 -36.344 64.715 1.00 57.07 N
ATOM 17 C5 A B 8 -4.187 -37.064 65.754 1.00 73.90 C
ATOM 18 C6 A B 8 -5.248 -37.983 65.796 1.00 41.09 C
ATOM 19 N6 A B 8 -5.953 -38.348 64.725 1.00112.35 N
ATOM 20 N1 A B 8 -5.565 -38.521 66.991 1.00 65.62 N
ATOM 21 C2 A B 8 -4.860 -38.155 68.065 1.00 98.24 C
ATOM 22 N3 A B 8 -3.844 -37.303 68.154 1.00 49.95 N
ATOM 23 C4 A B 8 -3.550 -36.785 66.948 1.00 81.00 C
ATOM 24 P G B 9 1.847 -33.383 69.842 1.00 56.83 P
ATOM 25 OP1 G B 9 1.778 -33.904 71.227 1.00 80.91 O
ATOM 26 OP2 G B 9 1.578 -31.945 69.610 1.00 84.80 O
ATOM 27 O5' G B 9 3.236 -33.790 69.180 1.00 63.36 O
TER
ATOM 2 P C A 12 0.460 -29.052 54.823 1.00 84.62 P
ATOM 3 OP1 C A 12 0.767 -28.577 53.450 1.00129.62 O
ATOM 4 OP2 C A 12 0.495 -28.075 55.939 1.00 28.61 O
ATOM 5 O5' C A 12 -0.921 -29.842 54.830 1.00 86.17 O
ATOM 6 C5' C A 12 -2.126 -29.211 55.238 1.00 78.02 C
ATOM 7 C4' C A 12 -3.310 -30.132 55.090 1.00108.03 C
ATOM 8 O4' C A 12 -3.218 -31.197 56.081 1.00 32.82 O
ATOM 9 C3' C A 12 -4.666 -29.470 55.302 1.00 95.62 C
ATOM 10 O3' C A 12 -5.635 -30.092 54.468 1.00 55.94 O
ATOM 11 C2' C A 12 -4.969 -29.792 56.756 1.00141.77 C
ATOM 12 O2' C A 12 -6.338 -29.764 57.091 1.00171.84 O
ATOM 13 C1' C A 12 -4.377 -31.193 56.890 1.00 72.36 C
ATOM 14 N1 C A 12 -3.983 -31.532 58.269 1.00 88.87 N
ATOM 15 C2 C A 12 -4.408 -32.731 58.837 1.00 66.91 C
ATOM 16 O2 C A 12 -5.085 -33.512 58.158 1.00 83.84 O
ATOM 17 N3 C A 12 -4.059 -33.009 60.110 1.00 76.13 N
ATOM 18 C4 C A 12 -3.327 -32.139 60.807 1.00 84.75 C
ATOM 19 N4 C A 12 -3.000 -32.454 62.061 1.00100.65 N
ATOM 20 C5 C A 12 -2.890 -30.904 60.256 1.00 99.01 C
ATOM 21 C6 C A 12 -3.245 -30.641 58.996 1.00123.97 C
ATOM 22 P A A 13 -6.966 -29.299 54.061 1.00105.80 P
ATOM 23 OP1 A A 13 -6.900 -29.055 52.599 1.00173.72 O
ATOM 24 OP2 A A 13 -7.071 -28.138 54.973 1.00 63.33 O
ATOM 25 O5' A A 13 -8.116 -30.349 54.385 1.00129.13 O
TER
ATOM 1 O3' U B 7 -3.392 -29.634 66.725 1.00 38.17 O
ATOM 2 P A B 8 -2.128 -30.487 66.229 1.00 61.00 P
ATOM 3 OP1 A B 8 -0.913 -29.792 66.721 1.00 68.36 O
ATOM 4 OP2 A B 8 -2.287 -30.699 64.771 1.00 52.69 O
ATOM 5 O5' A B 8 -2.311 -31.867 66.996 1.00 74.13 O
ATOM 6 C5' A B 8 -2.087 -31.958 68.397 1.00 48.44 C
ATOM 7 C4' A B 8 -1.429 -33.260 68.767 1.00 30.71 C
ATOM 8 O4' A B 8 -2.314 -34.356 68.405 1.00 57.86 O
ATOM 9 C3' A B 8 -0.097 -33.536 68.071 1.00 35.94 C
ATOM 10 O3' A B 8 0.780 -34.213 68.971 1.00 63.99 O
ATOM 11 C2' A B 8 -0.499 -34.478 66.937 1.00 48.95 C
ATOM 12 O2' A B 8 0.538 -35.314 66.469 1.00 56.65 O
ATOM 13 C1' A B 8 -1.619 -35.276 67.591 1.00 58.11 C
ATOM 14 N9 A B 8 -2.570 -35.867 66.647 1.00 36.82 N
ATOM 15 C8 A B 8 -2.667 -35.655 65.297 1.00 43.67 C
ATOM 16 N7 A B 8 -3.618 -36.344 64.715 1.00 57.07 N
ATOM 17 C5 A B 8 -4.187 -37.064 65.754 1.00 73.90 C
ATOM 18 C6 A B 8 -5.248 -37.983 65.796 1.00 41.09 C
ATOM 19 N6 A B 8 -5.953 -38.348 64.725 1.00112.35 N
ATOM 20 N1 A B 8 -5.565 -38.521 66.991 1.00 65.62 N
ATOM 21 C2 A B 8 -4.860 -38.155 68.065 1.00 98.24 C
ATOM 22 N3 A B 8 -3.844 -37.303 68.154 1.00 49.95 N
ATOM 23 C4 A B 8 -3.550 -36.785 66.948 1.00 81.00 C
ATOM 24 P G B 9 1.847 -33.383 69.842 1.00 56.83 P
ATOM 25 OP1 G B 9 1.778 -33.904 71.227 1.00 80.91 O
ATOM 26 OP2 G B 9 1.578 -31.945 69.610 1.00 84.80 O
ATOM 27 O5' G B 9 3.236 -33.790 69.180 1.00 63.36 O
TER
Atoms:
C2: (-4.408,-32.731,58.837)
OP1: (0.767,-28.577,53.450)
OP2: (0.495,-28.075,55.939)
C4: (-3.327,-32.139,60.807)
O5': (-0.921,-29.842,54.830)
C3': (-4.666,-29.470,55.302)
C1': (-4.377,-31.193,56.890)
O4': (-3.218,-31.197,56.081)
C5': (-2.126,-29.211,55.238)
P: (0.460,-29.052,54.823)
O2: (-5.085,-33.512,58.158)
C4': (-3.310,-30.132,55.090)
C2': (-4.969,-29.792,56.756)
O2': (-6.338,-29.764,57.091)
N1: (-3.983,-31.532,58.269)
N3: (-4.059,-33.009,60.110)
N4: (-3.000,-32.454,62.061)
C6: (-3.245,-30.641,58.996)
C5: (-2.890,-30.904,60.256)
O3': (-5.635,-30.092,54.468)
OP1: (0.767,-28.577,53.450)
OP2: (0.495,-28.075,55.939)
C4: (-3.327,-32.139,60.807)
O5': (-0.921,-29.842,54.830)
C3': (-4.666,-29.470,55.302)
C1': (-4.377,-31.193,56.890)
O4': (-3.218,-31.197,56.081)
C5': (-2.126,-29.211,55.238)
P: (0.460,-29.052,54.823)
O2: (-5.085,-33.512,58.158)
C4': (-3.310,-30.132,55.090)
C2': (-4.969,-29.792,56.756)
O2': (-6.338,-29.764,57.091)
N1: (-3.983,-31.532,58.269)
N3: (-4.059,-33.009,60.110)
N4: (-3.000,-32.454,62.061)
C6: (-3.245,-30.641,58.996)
C5: (-2.890,-30.904,60.256)
O3': (-5.635,-30.092,54.468)
OP1: (-0.913,-29.792,66.721)
OP2: (-2.287,-30.699,64.771)
C3': (-0.097,-33.536,68.071)
C1': (-1.619,-35.276,67.591)
C5': (-2.087,-31.958,68.397)
O4': (-2.314,-34.356,68.405)
C8: (-2.667,-35.655,65.297)
O2': (0.538,-35.314,66.469)
C6: (-5.248,-37.983,65.796)
C5: (-4.187,-37.064,65.754)
C4: (-3.550,-36.785,66.948)
P: (-2.128,-30.487,66.229)
C4': (-1.429,-33.260,68.767)
C2': (-0.499,-34.478,66.937)
C2: (-4.860,-38.155,68.065)
N1: (-5.565,-38.521,66.991)
N3: (-3.844,-37.303,68.154)
N6: (-5.953,-38.348,64.725)
N7: (-3.618,-36.344,64.715)
N9: (-2.570,-35.867,66.647)
O5': (-2.311,-31.867,66.996)
O3': (0.780,-34.213,68.971)
OP2: (-2.287,-30.699,64.771)
C3': (-0.097,-33.536,68.071)
C1': (-1.619,-35.276,67.591)
C5': (-2.087,-31.958,68.397)
O4': (-2.314,-34.356,68.405)
C8: (-2.667,-35.655,65.297)
O2': (0.538,-35.314,66.469)
C6: (-5.248,-37.983,65.796)
C5: (-4.187,-37.064,65.754)
C4: (-3.550,-36.785,66.948)
P: (-2.128,-30.487,66.229)
C4': (-1.429,-33.260,68.767)
C2': (-0.499,-34.478,66.937)
C2: (-4.860,-38.155,68.065)
N1: (-5.565,-38.521,66.991)
N3: (-3.844,-37.303,68.154)
N6: (-5.953,-38.348,64.725)
N7: (-3.618,-36.344,64.715)
N9: (-2.570,-35.867,66.647)
O5': (-2.311,-31.867,66.996)
O3': (0.780,-34.213,68.971)
Image (generated by PyMOL):