Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0609:0618
Extra
PDB:
ATOM 1 O3' A A 608 34.378 116.770 91.996 1.00 24.22 O
ATOM 2 P C A 609 34.886 115.590 91.020 1.00 26.74 P
ATOM 3 OP1 C A 609 33.717 114.728 90.690 1.00 27.12 O
ATOM 4 OP2 C A 609 36.076 114.973 91.639 1.00 26.85 O
ATOM 5 O5' C A 609 35.336 116.328 89.680 1.00 25.19 O
ATOM 6 C5' C A 609 34.364 116.772 88.716 1.00 26.95 C
ATOM 7 C4' C A 609 35.041 117.404 87.521 1.00 27.22 C
ATOM 8 O4' C A 609 35.753 118.605 87.916 1.00 29.57 O
ATOM 9 C3' C A 609 36.089 116.551 86.834 1.00 27.87 C
ATOM 10 O3' C A 609 35.474 115.656 85.921 1.00 28.23 O
ATOM 11 C2' C A 609 36.941 117.595 86.128 1.00 29.37 C
ATOM 12 O2' C A 609 36.336 118.091 84.958 1.00 31.02 O
ATOM 13 C1' C A 609 36.941 118.728 87.153 1.00 30.18 C
ATOM 14 N1 C A 609 38.101 118.701 88.067 1.00 33.19 N
ATOM 15 C2 C A 609 39.279 119.395 87.698 1.00 34.20 C
ATOM 16 O2 C A 609 39.317 119.990 86.612 1.00 32.96 O
ATOM 17 N3 C A 609 40.339 119.395 88.542 1.00 34.89 N
ATOM 18 C4 C A 609 40.264 118.748 89.708 1.00 33.06 C
ATOM 19 N4 C A 609 41.321 118.800 90.514 1.00 32.25 N
ATOM 20 C5 C A 609 39.094 118.024 90.099 1.00 33.21 C
ATOM 21 C6 C A 609 38.048 118.026 89.258 1.00 32.16 C
ATOM 22 P G A 610 35.965 114.131 85.850 1.00 31.11 P
ATOM 23 OP1 G A 610 35.042 113.392 84.949 1.00 28.28 O
ATOM 24 OP2 G A 610 36.174 113.663 87.240 1.00 30.71 O
ATOM 25 O5' G A 610 37.386 114.219 85.140 1.00 29.86 O
TER
ATOM 1 O3' A B 617 41.019 117.430 95.064 1.00 29.82 O
ATOM 2 P A B 618 42.345 116.941 94.314 1.00 31.60 P
ATOM 3 OP1 A B 618 42.400 117.772 93.090 1.00 29.50 O
ATOM 4 OP2 A B 618 42.315 115.463 94.197 1.00 35.18 O
ATOM 5 O5' A B 618 43.564 117.251 95.302 1.00 30.30 O
ATOM 6 C5' A B 618 43.847 118.577 95.758 1.00 29.07 C
ATOM 7 C4' A B 618 44.593 118.547 97.086 1.00 29.29 C
ATOM 8 O4' A B 618 43.945 117.614 97.994 1.00 28.72 O
ATOM 9 C3' A B 618 46.080 118.201 97.108 1.00 27.49 C
ATOM 10 O3' A B 618 46.717 118.999 98.105 1.00 28.58 O
ATOM 11 C2' A B 618 46.082 116.746 97.569 1.00 29.51 C
ATOM 12 O2' A B 618 47.240 116.360 98.284 1.00 28.66 O
ATOM 13 C1' A B 618 44.899 116.725 98.529 1.00 29.02 C
ATOM 14 N9 A B 618 44.291 115.399 98.616 1.00 29.87 N
ATOM 15 C8 A B 618 43.325 114.866 97.802 1.00 30.58 C
ATOM 16 N7 A B 618 42.976 113.647 98.124 1.00 30.74 N
ATOM 17 C5 A B 618 43.765 113.354 99.222 1.00 29.86 C
ATOM 18 C6 A B 618 43.873 112.209 100.022 1.00 30.51 C
ATOM 19 N6 A B 618 43.146 111.108 99.829 1.00 29.79 N
ATOM 20 N1 A B 618 44.764 112.233 101.040 1.00 30.55 N
ATOM 21 C2 A B 618 45.490 113.344 101.228 1.00 30.20 C
ATOM 22 N3 A B 618 45.475 114.488 100.541 1.00 31.06 N
ATOM 23 C4 A B 618 44.582 114.425 99.538 1.00 30.53 C
ATOM 24 P A B 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 25 OP1 A B 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 26 OP2 A B 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 27 O5' A B 619 48.123 121.029 98.649 1.00 30.59 O
TER
ATOM 2 P C A 609 34.886 115.590 91.020 1.00 26.74 P
ATOM 3 OP1 C A 609 33.717 114.728 90.690 1.00 27.12 O
ATOM 4 OP2 C A 609 36.076 114.973 91.639 1.00 26.85 O
ATOM 5 O5' C A 609 35.336 116.328 89.680 1.00 25.19 O
ATOM 6 C5' C A 609 34.364 116.772 88.716 1.00 26.95 C
ATOM 7 C4' C A 609 35.041 117.404 87.521 1.00 27.22 C
ATOM 8 O4' C A 609 35.753 118.605 87.916 1.00 29.57 O
ATOM 9 C3' C A 609 36.089 116.551 86.834 1.00 27.87 C
ATOM 10 O3' C A 609 35.474 115.656 85.921 1.00 28.23 O
ATOM 11 C2' C A 609 36.941 117.595 86.128 1.00 29.37 C
ATOM 12 O2' C A 609 36.336 118.091 84.958 1.00 31.02 O
ATOM 13 C1' C A 609 36.941 118.728 87.153 1.00 30.18 C
ATOM 14 N1 C A 609 38.101 118.701 88.067 1.00 33.19 N
ATOM 15 C2 C A 609 39.279 119.395 87.698 1.00 34.20 C
ATOM 16 O2 C A 609 39.317 119.990 86.612 1.00 32.96 O
ATOM 17 N3 C A 609 40.339 119.395 88.542 1.00 34.89 N
ATOM 18 C4 C A 609 40.264 118.748 89.708 1.00 33.06 C
ATOM 19 N4 C A 609 41.321 118.800 90.514 1.00 32.25 N
ATOM 20 C5 C A 609 39.094 118.024 90.099 1.00 33.21 C
ATOM 21 C6 C A 609 38.048 118.026 89.258 1.00 32.16 C
ATOM 22 P G A 610 35.965 114.131 85.850 1.00 31.11 P
ATOM 23 OP1 G A 610 35.042 113.392 84.949 1.00 28.28 O
ATOM 24 OP2 G A 610 36.174 113.663 87.240 1.00 30.71 O
ATOM 25 O5' G A 610 37.386 114.219 85.140 1.00 29.86 O
TER
ATOM 1 O3' A B 617 41.019 117.430 95.064 1.00 29.82 O
ATOM 2 P A B 618 42.345 116.941 94.314 1.00 31.60 P
ATOM 3 OP1 A B 618 42.400 117.772 93.090 1.00 29.50 O
ATOM 4 OP2 A B 618 42.315 115.463 94.197 1.00 35.18 O
ATOM 5 O5' A B 618 43.564 117.251 95.302 1.00 30.30 O
ATOM 6 C5' A B 618 43.847 118.577 95.758 1.00 29.07 C
ATOM 7 C4' A B 618 44.593 118.547 97.086 1.00 29.29 C
ATOM 8 O4' A B 618 43.945 117.614 97.994 1.00 28.72 O
ATOM 9 C3' A B 618 46.080 118.201 97.108 1.00 27.49 C
ATOM 10 O3' A B 618 46.717 118.999 98.105 1.00 28.58 O
ATOM 11 C2' A B 618 46.082 116.746 97.569 1.00 29.51 C
ATOM 12 O2' A B 618 47.240 116.360 98.284 1.00 28.66 O
ATOM 13 C1' A B 618 44.899 116.725 98.529 1.00 29.02 C
ATOM 14 N9 A B 618 44.291 115.399 98.616 1.00 29.87 N
ATOM 15 C8 A B 618 43.325 114.866 97.802 1.00 30.58 C
ATOM 16 N7 A B 618 42.976 113.647 98.124 1.00 30.74 N
ATOM 17 C5 A B 618 43.765 113.354 99.222 1.00 29.86 C
ATOM 18 C6 A B 618 43.873 112.209 100.022 1.00 30.51 C
ATOM 19 N6 A B 618 43.146 111.108 99.829 1.00 29.79 N
ATOM 20 N1 A B 618 44.764 112.233 101.040 1.00 30.55 N
ATOM 21 C2 A B 618 45.490 113.344 101.228 1.00 30.20 C
ATOM 22 N3 A B 618 45.475 114.488 100.541 1.00 31.06 N
ATOM 23 C4 A B 618 44.582 114.425 99.538 1.00 30.53 C
ATOM 24 P A B 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 25 OP1 A B 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 26 OP2 A B 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 27 O5' A B 619 48.123 121.029 98.649 1.00 30.59 O
TER
Atoms:
C2: (39.279,119.395,87.698)
OP1: (33.717,114.728,90.690)
OP2: (36.076,114.973,91.639)
C4: (40.264,118.748,89.708)
O5': (35.336,116.328,89.680)
C3': (36.089,116.551,86.834)
C1': (36.941,118.728,87.153)
O4': (35.753,118.605,87.916)
C5': (34.364,116.772,88.716)
P: (34.886,115.590,91.020)
O2: (39.317,119.990,86.612)
C4': (35.041,117.404,87.521)
C2': (36.941,117.595,86.128)
O2': (36.336,118.091,84.958)
N1: (38.101,118.701,88.067)
N3: (40.339,119.395,88.542)
N4: (41.321,118.800,90.514)
C6: (38.048,118.026,89.258)
C5: (39.094,118.024,90.099)
O3': (35.474,115.656,85.921)
OP1: (33.717,114.728,90.690)
OP2: (36.076,114.973,91.639)
C4: (40.264,118.748,89.708)
O5': (35.336,116.328,89.680)
C3': (36.089,116.551,86.834)
C1': (36.941,118.728,87.153)
O4': (35.753,118.605,87.916)
C5': (34.364,116.772,88.716)
P: (34.886,115.590,91.020)
O2: (39.317,119.990,86.612)
C4': (35.041,117.404,87.521)
C2': (36.941,117.595,86.128)
O2': (36.336,118.091,84.958)
N1: (38.101,118.701,88.067)
N3: (40.339,119.395,88.542)
N4: (41.321,118.800,90.514)
C6: (38.048,118.026,89.258)
C5: (39.094,118.024,90.099)
O3': (35.474,115.656,85.921)
OP1: (42.400,117.772,93.090)
OP2: (42.315,115.463,94.197)
C3': (46.080,118.201,97.108)
C1': (44.899,116.725,98.529)
C5': (43.847,118.577,95.758)
O4': (43.945,117.614,97.994)
C8: (43.325,114.866,97.802)
O2': (47.240,116.360,98.284)
C6: (43.873,112.209,100.022)
C5: (43.765,113.354,99.222)
C4: (44.582,114.425,99.538)
P: (42.345,116.941,94.314)
C4': (44.593,118.547,97.086)
C2': (46.082,116.746,97.569)
C2: (45.490,113.344,101.228)
N1: (44.764,112.233,101.040)
N3: (45.475,114.488,100.541)
N6: (43.146,111.108,99.829)
N7: (42.976,113.647,98.124)
N9: (44.291,115.399,98.616)
O5': (43.564,117.251,95.302)
O3': (46.717,118.999,98.105)
OP2: (42.315,115.463,94.197)
C3': (46.080,118.201,97.108)
C1': (44.899,116.725,98.529)
C5': (43.847,118.577,95.758)
O4': (43.945,117.614,97.994)
C8: (43.325,114.866,97.802)
O2': (47.240,116.360,98.284)
C6: (43.873,112.209,100.022)
C5: (43.765,113.354,99.222)
C4: (44.582,114.425,99.538)
P: (42.345,116.941,94.314)
C4': (44.593,118.547,97.086)
C2': (46.082,116.746,97.569)
C2: (45.490,113.344,101.228)
N1: (44.764,112.233,101.040)
N3: (45.475,114.488,100.541)
N6: (43.146,111.108,99.829)
N7: (42.976,113.647,98.124)
N9: (44.291,115.399,98.616)
O5': (43.564,117.251,95.302)
O3': (46.717,118.999,98.105)
Image (generated by PyMOL):