ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5405:5406

Extra

PDB:
ATOM 1 O3' A A 404 102.168 14.221 214.676 1.00 38.94 O
ATOM 2 P A A 405 103.034 15.204 215.601 1.00 42.53 P
ATOM 3 OP1 A A 405 102.317 15.340 216.886 1.00 42.44 O
ATOM 4 OP2 A A 405 103.338 16.416 214.812 1.00 42.65 O
ATOM 5 O5' A A 405 104.353 14.367 215.840 1.00 42.19 O
ATOM 6 C5' A A 405 104.491 13.594 217.004 1.00 41.93 C
ATOM 7 C4' A A 405 105.902 13.173 217.201 1.00 41.60 C
ATOM 8 O4' A A 405 106.407 12.588 215.991 1.00 41.73 O
ATOM 9 C3' A A 405 106.892 14.272 217.498 1.00 41.36 C
ATOM 10 O3' A A 405 106.839 14.682 218.846 1.00 41.13 O
ATOM 11 C2' A A 405 108.202 13.592 217.142 1.00 41.17 C
ATOM 12 O2' A A 405 108.560 12.667 218.160 1.00 40.90 O
ATOM 13 C1' A A 405 107.791 12.795 215.913 1.00 41.47 C
ATOM 14 N9 A A 405 108.080 13.492 214.651 1.00 41.68 N
ATOM 15 C8 A A 405 107.217 14.211 213.913 1.00 42.00 C
ATOM 16 N7 A A 405 107.752 14.649 212.802 1.00 42.14 N
ATOM 17 C5 A A 405 109.034 14.180 212.812 1.00 41.89 C
ATOM 18 C6 A A 405 110.070 14.313 211.900 1.00 41.90 C
ATOM 19 N6 A A 405 110.019 14.989 210.772 1.00 42.17 N
ATOM 20 N1 A A 405 111.206 13.710 212.185 1.00 41.63 N
ATOM 21 C2 A A 405 111.246 13.029 213.348 1.00 41.37 C
ATOM 22 N3 A A 405 110.344 12.828 214.296 1.00 41.33 N
ATOM 23 C4 A A 405 109.241 13.460 213.947 1.00 41.61 C
ATOM 24 P A A 406 107.121 16.196 219.263 1.00 41.12 P
ATOM 25 OP1 A A 406 106.566 16.356 220.629 1.00 41.00 O
ATOM 26 OP2 A A 406 106.618 17.082 218.166 1.00 41.44 O
ATOM 27 O5' A A 406 108.690 16.279 219.315 1.00 40.81 O
TER

ATOM 1 O3' A B 405 106.839 14.682 218.846 1.00 41.13 O
ATOM 2 P A B 406 107.121 16.196 219.263 1.00 41.12 P
ATOM 3 OP1 A B 406 106.566 16.356 220.629 1.00 41.00 O
ATOM 4 OP2 A B 406 106.618 17.082 218.166 1.00 41.44 O
ATOM 5 O5' A B 406 108.690 16.279 219.315 1.00 40.81 O
ATOM 6 C5' A B 406 109.454 15.327 219.978 1.00 40.53 C
ATOM 7 C4' A B 406 110.852 15.413 219.485 1.00 40.36 C
ATOM 8 O4' A B 406 110.888 14.981 218.107 1.00 40.60 O
ATOM 9 C3' A B 406 111.425 16.816 219.454 1.00 40.30 C
ATOM 10 O3' A B 406 111.988 17.182 220.681 1.00 40.00 O
ATOM 11 C2' A B 406 112.457 16.748 218.362 1.00 40.32 C
ATOM 12 O2' A B 406 113.724 16.386 218.891 1.00 40.00 O
ATOM 13 C1' A B 406 111.921 15.633 217.438 1.00 40.56 C
ATOM 14 N9 A B 406 111.411 16.203 216.183 1.00 40.90 N
ATOM 15 C8 A B 406 110.345 17.025 215.979 1.00 41.15 C
ATOM 16 N7 A B 406 110.230 17.491 214.776 1.00 41.42 N
ATOM 17 C5 A B 406 111.330 16.964 214.143 1.00 41.34 C
ATOM 18 C6 A B 406 111.827 17.070 212.823 1.00 41.54 C
ATOM 19 N6 A B 406 111.194 17.787 211.880 1.00 41.87 N
ATOM 20 N1 A B 406 112.968 16.411 212.491 1.00 41.40 N
ATOM 21 C2 A B 406 113.554 15.700 213.431 1.00 41.08 C
ATOM 22 N3 A B 406 113.202 15.540 214.695 1.00 40.88 N
ATOM 23 C4 A B 406 112.078 16.198 215.000 1.00 41.02 C
ATOM 24 P U B 407 111.455 18.451 221.493 1.00 36.75 P
ATOM 25 OP1 U B 407 112.187 18.507 222.741 1.00 36.42 O
ATOM 26 OP2 U B 407 109.991 18.347 221.557 1.00 37.00 O
ATOM 27 O5' U B 407 111.896 19.648 220.579 1.00 36.87 O
TER

Atoms:
OP1: (102.317,15.340,216.886)
OP2: (103.338,16.416,214.812)
C3': (106.892,14.272,217.498)
C1': (107.791,12.795,215.913)
C5': (104.491,13.594,217.004)
O4': (106.407,12.588,215.991)
C8: (107.217,14.211,213.913)
O2': (108.560,12.667,218.160)
C6: (110.070,14.313,211.900)
C5: (109.034,14.180,212.812)
C4: (109.241,13.460,213.947)
P: (103.034,15.204,215.601)
C4': (105.902,13.173,217.201)
C2': (108.202,13.592,217.142)
C2: (111.246,13.029,213.348)
N1: (111.206,13.710,212.185)
N3: (110.344,12.828,214.296)
N6: (110.019,14.989,210.772)
N7: (107.752,14.649,212.802)
N9: (108.080,13.492,214.651)
O5': (104.353,14.367,215.840)
O3': (106.839,14.682,218.846)
OP1: (106.566,16.356,220.629)
OP2: (106.618,17.082,218.166)
C3': (111.425,16.816,219.454)
C1': (111.921,15.633,217.438)
C5': (109.454,15.327,219.978)
O4': (110.888,14.981,218.107)
C8: (110.345,17.025,215.979)
O2': (113.724,16.386,218.891)
C6: (111.827,17.070,212.823)
C5: (111.330,16.964,214.143)
C4: (112.078,16.198,215.000)
P: (107.121,16.196,219.263)
C4': (110.852,15.413,219.485)
C2': (112.457,16.748,218.362)
C2: (113.554,15.700,213.431)
N1: (112.968,16.411,212.491)
N3: (113.202,15.540,214.695)
N6: (111.194,17.787,211.880)
N7: (110.230,17.491,214.776)
N9: (111.411,16.203,216.183)
O5': (108.690,16.279,219.315)
O3': (111.988,17.182,220.681)
Image (generated by PyMOL):
PyMOL image
show in jmol