Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0681:0682
Extra
PDB:
ATOM 1 O3' A A 680 65.514 74.612 45.918 1.00 54.57 O
ATOM 2 P A A 681 64.522 74.137 44.757 1.00 53.24 P
ATOM 3 OP1 A A 681 63.896 75.323 44.112 1.00 51.45 O
ATOM 4 OP2 A A 681 63.660 73.111 45.390 1.00 55.60 O
ATOM 5 O5' A A 681 65.495 73.459 43.695 1.00 53.57 O
ATOM 6 C5' A A 681 66.501 74.240 43.023 1.00 53.46 C
ATOM 7 C4' A A 681 67.514 73.340 42.364 1.00 53.80 C
ATOM 8 O4' A A 681 68.114 72.480 43.365 1.00 55.37 O
ATOM 9 C3' A A 681 66.962 72.377 41.333 1.00 54.07 C
ATOM 10 O3' A A 681 66.818 73.010 40.071 1.00 53.94 O
ATOM 11 C2' A A 681 68.017 71.281 41.326 1.00 55.06 C
ATOM 12 O2' A A 681 69.183 71.649 40.618 1.00 56.22 O
ATOM 13 C1' A A 681 68.363 71.198 42.811 1.00 55.39 C
ATOM 14 N9 A A 681 67.558 70.215 43.542 1.00 57.33 N
ATOM 15 C8 A A 681 66.332 70.395 44.142 1.00 58.57 C
ATOM 16 N7 A A 681 65.870 69.321 44.737 1.00 58.53 N
ATOM 17 C5 A A 681 66.854 68.370 44.514 1.00 58.13 C
ATOM 18 C6 A A 681 66.963 67.026 44.886 1.00 59.77 C
ATOM 19 N6 A A 681 66.041 66.381 45.601 1.00 61.54 N
ATOM 20 N1 A A 681 68.065 66.352 44.497 1.00 60.02 N
ATOM 21 C2 A A 681 68.990 67.001 43.780 1.00 59.38 C
ATOM 22 N3 A A 681 69.004 68.263 43.370 1.00 58.43 N
ATOM 23 C4 A A 681 67.895 68.903 43.775 1.00 57.55 C
ATOM 24 P A A 682 65.802 72.403 38.986 1.00 55.36 P
ATOM 25 OP1 A A 682 65.856 73.299 37.807 1.00 54.86 O
ATOM 26 OP2 A A 682 64.501 72.145 39.636 1.00 55.23 O
ATOM 27 O5' A A 682 66.460 71.002 38.597 1.00 56.44 O
TER
ATOM 1 O3' A B 681 66.818 73.010 40.071 1.00 53.94 O
ATOM 2 P A B 682 65.802 72.403 38.986 1.00 55.36 P
ATOM 3 OP1 A B 682 65.856 73.299 37.807 1.00 54.86 O
ATOM 4 OP2 A B 682 64.501 72.145 39.636 1.00 55.23 O
ATOM 5 O5' A B 682 66.460 71.002 38.597 1.00 56.44 O
ATOM 6 C5' A B 682 67.724 70.949 37.898 1.00 56.70 C
ATOM 7 C4' A B 682 68.189 69.519 37.739 1.00 58.27 C
ATOM 8 O4' A B 682 68.487 68.951 39.044 1.00 58.23 O
ATOM 9 C3' A B 682 67.199 68.550 37.110 1.00 59.07 C
ATOM 10 O3' A B 682 67.230 68.592 35.687 1.00 61.51 O
ATOM 11 C2' A B 682 67.694 67.215 37.646 1.00 58.99 C
ATOM 12 O2' A B 682 68.840 66.748 36.962 1.00 57.91 O
ATOM 13 C1' A B 682 68.067 67.596 39.080 1.00 58.34 C
ATOM 14 N9 A B 682 66.903 67.514 39.964 1.00 58.25 N
ATOM 15 C8 A B 682 65.878 68.424 40.079 1.00 57.50 C
ATOM 16 N7 A B 682 64.956 68.076 40.938 1.00 57.36 N
ATOM 17 C5 A B 682 65.402 66.858 41.429 1.00 56.78 C
ATOM 18 C6 A B 682 64.863 65.974 42.372 1.00 56.77 C
ATOM 19 N6 A B 682 63.708 66.187 43.008 1.00 56.12 N
ATOM 20 N1 A B 682 65.556 64.847 42.641 1.00 56.50 N
ATOM 21 C2 A B 682 66.712 64.636 41.994 1.00 56.42 C
ATOM 22 N3 A B 682 67.320 65.391 41.083 1.00 55.69 N
ATOM 23 C4 A B 682 66.604 66.502 40.842 1.00 57.21 C
ATOM 24 P C B 683 65.854 68.553 34.844 1.00 63.30 P
ATOM 25 OP1 C B 683 66.267 68.128 33.479 1.00 63.98 O
ATOM 26 OP2 C B 683 65.119 69.828 35.017 1.00 63.93 O
ATOM 27 O5' C B 683 64.961 67.419 35.532 1.00 63.02 O
TER
ATOM 2 P A A 681 64.522 74.137 44.757 1.00 53.24 P
ATOM 3 OP1 A A 681 63.896 75.323 44.112 1.00 51.45 O
ATOM 4 OP2 A A 681 63.660 73.111 45.390 1.00 55.60 O
ATOM 5 O5' A A 681 65.495 73.459 43.695 1.00 53.57 O
ATOM 6 C5' A A 681 66.501 74.240 43.023 1.00 53.46 C
ATOM 7 C4' A A 681 67.514 73.340 42.364 1.00 53.80 C
ATOM 8 O4' A A 681 68.114 72.480 43.365 1.00 55.37 O
ATOM 9 C3' A A 681 66.962 72.377 41.333 1.00 54.07 C
ATOM 10 O3' A A 681 66.818 73.010 40.071 1.00 53.94 O
ATOM 11 C2' A A 681 68.017 71.281 41.326 1.00 55.06 C
ATOM 12 O2' A A 681 69.183 71.649 40.618 1.00 56.22 O
ATOM 13 C1' A A 681 68.363 71.198 42.811 1.00 55.39 C
ATOM 14 N9 A A 681 67.558 70.215 43.542 1.00 57.33 N
ATOM 15 C8 A A 681 66.332 70.395 44.142 1.00 58.57 C
ATOM 16 N7 A A 681 65.870 69.321 44.737 1.00 58.53 N
ATOM 17 C5 A A 681 66.854 68.370 44.514 1.00 58.13 C
ATOM 18 C6 A A 681 66.963 67.026 44.886 1.00 59.77 C
ATOM 19 N6 A A 681 66.041 66.381 45.601 1.00 61.54 N
ATOM 20 N1 A A 681 68.065 66.352 44.497 1.00 60.02 N
ATOM 21 C2 A A 681 68.990 67.001 43.780 1.00 59.38 C
ATOM 22 N3 A A 681 69.004 68.263 43.370 1.00 58.43 N
ATOM 23 C4 A A 681 67.895 68.903 43.775 1.00 57.55 C
ATOM 24 P A A 682 65.802 72.403 38.986 1.00 55.36 P
ATOM 25 OP1 A A 682 65.856 73.299 37.807 1.00 54.86 O
ATOM 26 OP2 A A 682 64.501 72.145 39.636 1.00 55.23 O
ATOM 27 O5' A A 682 66.460 71.002 38.597 1.00 56.44 O
TER
ATOM 1 O3' A B 681 66.818 73.010 40.071 1.00 53.94 O
ATOM 2 P A B 682 65.802 72.403 38.986 1.00 55.36 P
ATOM 3 OP1 A B 682 65.856 73.299 37.807 1.00 54.86 O
ATOM 4 OP2 A B 682 64.501 72.145 39.636 1.00 55.23 O
ATOM 5 O5' A B 682 66.460 71.002 38.597 1.00 56.44 O
ATOM 6 C5' A B 682 67.724 70.949 37.898 1.00 56.70 C
ATOM 7 C4' A B 682 68.189 69.519 37.739 1.00 58.27 C
ATOM 8 O4' A B 682 68.487 68.951 39.044 1.00 58.23 O
ATOM 9 C3' A B 682 67.199 68.550 37.110 1.00 59.07 C
ATOM 10 O3' A B 682 67.230 68.592 35.687 1.00 61.51 O
ATOM 11 C2' A B 682 67.694 67.215 37.646 1.00 58.99 C
ATOM 12 O2' A B 682 68.840 66.748 36.962 1.00 57.91 O
ATOM 13 C1' A B 682 68.067 67.596 39.080 1.00 58.34 C
ATOM 14 N9 A B 682 66.903 67.514 39.964 1.00 58.25 N
ATOM 15 C8 A B 682 65.878 68.424 40.079 1.00 57.50 C
ATOM 16 N7 A B 682 64.956 68.076 40.938 1.00 57.36 N
ATOM 17 C5 A B 682 65.402 66.858 41.429 1.00 56.78 C
ATOM 18 C6 A B 682 64.863 65.974 42.372 1.00 56.77 C
ATOM 19 N6 A B 682 63.708 66.187 43.008 1.00 56.12 N
ATOM 20 N1 A B 682 65.556 64.847 42.641 1.00 56.50 N
ATOM 21 C2 A B 682 66.712 64.636 41.994 1.00 56.42 C
ATOM 22 N3 A B 682 67.320 65.391 41.083 1.00 55.69 N
ATOM 23 C4 A B 682 66.604 66.502 40.842 1.00 57.21 C
ATOM 24 P C B 683 65.854 68.553 34.844 1.00 63.30 P
ATOM 25 OP1 C B 683 66.267 68.128 33.479 1.00 63.98 O
ATOM 26 OP2 C B 683 65.119 69.828 35.017 1.00 63.93 O
ATOM 27 O5' C B 683 64.961 67.419 35.532 1.00 63.02 O
TER
Atoms:
OP1: (63.896,75.323,44.112)
OP2: (63.660,73.111,45.390)
C3': (66.962,72.377,41.333)
C1': (68.363,71.198,42.811)
C5': (66.501,74.240,43.023)
O4': (68.114,72.480,43.365)
C8: (66.332,70.395,44.142)
O2': (69.183,71.649,40.618)
C6: (66.963,67.026,44.886)
C5: (66.854,68.370,44.514)
C4: (67.895,68.903,43.775)
P: (64.522,74.137,44.757)
C4': (67.514,73.340,42.364)
C2': (68.017,71.281,41.326)
C2: (68.990,67.001,43.780)
N1: (68.065,66.352,44.497)
N3: (69.004,68.263,43.370)
N6: (66.041,66.381,45.601)
N7: (65.870,69.321,44.737)
N9: (67.558,70.215,43.542)
O5': (65.495,73.459,43.695)
O3': (66.818,73.010,40.071)
OP2: (63.660,73.111,45.390)
C3': (66.962,72.377,41.333)
C1': (68.363,71.198,42.811)
C5': (66.501,74.240,43.023)
O4': (68.114,72.480,43.365)
C8: (66.332,70.395,44.142)
O2': (69.183,71.649,40.618)
C6: (66.963,67.026,44.886)
C5: (66.854,68.370,44.514)
C4: (67.895,68.903,43.775)
P: (64.522,74.137,44.757)
C4': (67.514,73.340,42.364)
C2': (68.017,71.281,41.326)
C2: (68.990,67.001,43.780)
N1: (68.065,66.352,44.497)
N3: (69.004,68.263,43.370)
N6: (66.041,66.381,45.601)
N7: (65.870,69.321,44.737)
N9: (67.558,70.215,43.542)
O5': (65.495,73.459,43.695)
O3': (66.818,73.010,40.071)
OP1: (65.856,73.299,37.807)
OP2: (64.501,72.145,39.636)
C3': (67.199,68.550,37.110)
C1': (68.067,67.596,39.080)
C5': (67.724,70.949,37.898)
O4': (68.487,68.951,39.044)
C8: (65.878,68.424,40.079)
O2': (68.840,66.748,36.962)
C6: (64.863,65.974,42.372)
C5: (65.402,66.858,41.429)
C4: (66.604,66.502,40.842)
P: (65.802,72.403,38.986)
C4': (68.189,69.519,37.739)
C2': (67.694,67.215,37.646)
C2: (66.712,64.636,41.994)
N1: (65.556,64.847,42.641)
N3: (67.320,65.391,41.083)
N6: (63.708,66.187,43.008)
N7: (64.956,68.076,40.938)
N9: (66.903,67.514,39.964)
O5': (66.460,71.002,38.597)
O3': (67.230,68.592,35.687)
OP2: (64.501,72.145,39.636)
C3': (67.199,68.550,37.110)
C1': (68.067,67.596,39.080)
C5': (67.724,70.949,37.898)
O4': (68.487,68.951,39.044)
C8: (65.878,68.424,40.079)
O2': (68.840,66.748,36.962)
C6: (64.863,65.974,42.372)
C5: (65.402,66.858,41.429)
C4: (66.604,66.502,40.842)
P: (65.802,72.403,38.986)
C4': (68.189,69.519,37.739)
C2': (67.694,67.215,37.646)
C2: (66.712,64.636,41.994)
N1: (65.556,64.847,42.641)
N3: (67.320,65.391,41.083)
N6: (63.708,66.187,43.008)
N7: (64.956,68.076,40.938)
N9: (66.903,67.514,39.964)
O5': (66.460,71.002,38.597)
O3': (67.230,68.592,35.687)
Image (generated by PyMOL):