ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SLM:A44:A45

Extra

PDB:
ATOM 1 O3' A A 43 -2.591 -16.389 22.484 1.00 30.15 O
ATOM 2 P A A 44 -3.919 -15.934 23.269 1.00 31.53 P
ATOM 3 OP1 A A 44 -4.836 -17.092 23.254 1.00 29.17 O
ATOM 4 OP2 A A 44 -4.375 -14.652 22.669 1.00 29.92 O
ATOM 5 O5' A A 44 -3.399 -15.687 24.748 1.00 26.89 O
ATOM 6 C5' A A 44 -3.264 -16.772 25.646 1.00 24.42 C
ATOM 7 C4' A A 44 -2.794 -16.320 27.001 1.00 27.20 C
ATOM 8 O4' A A 44 -1.613 -15.489 26.872 1.00 25.98 O
ATOM 9 C3' A A 44 -3.752 -15.451 27.789 1.00 25.75 C
ATOM 10 O3' A A 44 -4.776 -16.193 28.399 1.00 26.88 O
ATOM 11 C2' A A 44 -2.820 -14.792 28.786 1.00 31.30 C
ATOM 12 O2' A A 44 -2.469 -15.711 29.812 1.00 36.32 O
ATOM 13 C1' A A 44 -1.586 -14.544 27.921 1.00 22.35 C
ATOM 14 N9 A A 44 -1.597 -13.199 27.334 1.00 24.74 N
ATOM 15 C8 A A 44 -1.884 -12.857 26.038 1.00 26.72 C
ATOM 16 N7 A A 44 -1.799 -11.565 25.807 1.00 26.47 N
ATOM 17 C5 A A 44 -1.450 -11.022 27.034 1.00 25.80 C
ATOM 18 C6 A A 44 -1.231 -9.693 27.449 1.00 26.11 C
ATOM 19 N6 A A 44 -1.322 -8.620 26.653 1.00 23.36 N
ATOM 20 N1 A A 44 -0.905 -9.513 28.747 1.00 27.38 N
ATOM 21 C2 A A 44 -0.813 -10.593 29.544 1.00 25.48 C
ATOM 22 N3 A A 44 -0.992 -11.883 29.277 1.00 22.07 N
ATOM 23 C4 A A 44 -1.316 -12.025 27.985 1.00 25.66 C
ATOM 24 P A A 45 -6.259 -15.594 28.502 1.00 30.37 P
ATOM 25 OP1 A A 45 -7.140 -16.701 28.922 1.00 32.92 O
ATOM 26 OP2 A A 45 -6.549 -14.910 27.224 1.00 33.06 O
ATOM 27 O5' A A 45 -6.118 -14.525 29.682 1.00 34.95 O
TER

ATOM 1 O3' A B 44 -4.776 -16.193 28.399 1.00 26.88 O
ATOM 2 P A B 45 -6.259 -15.594 28.502 1.00 30.37 P
ATOM 3 OP1 A B 45 -7.140 -16.701 28.922 1.00 32.92 O
ATOM 4 OP2 A B 45 -6.549 -14.910 27.224 1.00 33.06 O
ATOM 5 O5' A B 45 -6.118 -14.525 29.682 1.00 34.95 O
ATOM 6 C5' A B 45 -5.772 -14.938 31.003 1.00 31.88 C
ATOM 7 C4' A B 45 -5.107 -13.828 31.797 1.00 37.59 C
ATOM 8 O4' A B 45 -4.018 -13.236 31.026 1.00 32.10 O
ATOM 9 C3' A B 45 -5.976 -12.630 32.155 1.00 34.13 C
ATOM 10 O3' A B 45 -6.865 -12.870 33.240 1.00 30.91 O
ATOM 11 C2' A B 45 -4.931 -11.550 32.429 1.00 32.80 C
ATOM 12 O2' A B 45 -4.307 -11.755 33.686 1.00 31.23 O
ATOM 13 C1' A B 45 -3.908 -11.856 31.340 1.00 29.32 C
ATOM 14 N9 A B 45 -4.149 -11.064 30.121 1.00 26.73 N
ATOM 15 C8 A B 45 -4.664 -11.453 28.915 1.00 30.55 C
ATOM 16 N7 A B 45 -4.737 -10.479 28.034 1.00 27.60 N
ATOM 17 C5 A B 45 -4.253 -9.375 28.699 1.00 25.36 C
ATOM 18 C6 A B 45 -4.072 -8.031 28.316 1.00 28.67 C
ATOM 19 N6 A B 45 -4.371 -7.518 27.118 1.00 27.30 N
ATOM 20 N1 A B 45 -3.556 -7.193 29.234 1.00 30.68 N
ATOM 21 C2 A B 45 -3.263 -7.683 30.445 1.00 31.73 C
ATOM 22 N3 A B 45 -3.386 -8.921 30.921 1.00 32.57 N
ATOM 23 C4 A B 45 -3.890 -9.729 29.983 1.00 28.08 C
ATOM 24 P C B 46 -8.365 -12.262 33.202 1.00 45.92 P
ATOM 25 OP1 C B 46 -9.120 -12.876 34.323 1.00 37.38 O
ATOM 26 OP2 C B 46 -8.885 -12.432 31.820 1.00 32.11 O
ATOM 27 O5' C B 46 -8.122 -10.719 33.495 1.00 36.45 O
TER

Atoms:
OP1: (-4.836,-17.092,23.254)
OP2: (-4.375,-14.652,22.669)
C3': (-3.752,-15.451,27.789)
C1': (-1.586,-14.544,27.921)
C5': (-3.264,-16.772,25.646)
O4': (-1.613,-15.489,26.872)
C8: (-1.884,-12.857,26.038)
O2': (-2.469,-15.711,29.812)
C6: (-1.231,-9.693,27.449)
C5: (-1.450,-11.022,27.034)
C4: (-1.316,-12.025,27.985)
P: (-3.919,-15.934,23.269)
C4': (-2.794,-16.320,27.001)
C2': (-2.820,-14.792,28.786)
C2: (-0.813,-10.593,29.544)
N1: (-0.905,-9.513,28.747)
N3: (-0.992,-11.883,29.277)
N6: (-1.322,-8.620,26.653)
N7: (-1.799,-11.565,25.807)
N9: (-1.597,-13.199,27.334)
O5': (-3.399,-15.687,24.748)
O3': (-4.776,-16.193,28.399)
OP1: (-7.140,-16.701,28.922)
OP2: (-6.549,-14.910,27.224)
C3': (-5.976,-12.630,32.155)
C1': (-3.908,-11.856,31.340)
C5': (-5.772,-14.938,31.003)
O4': (-4.018,-13.236,31.026)
C8: (-4.664,-11.453,28.915)
O2': (-4.307,-11.755,33.686)
C6: (-4.072,-8.031,28.316)
C5: (-4.253,-9.375,28.699)
C4: (-3.890,-9.729,29.983)
P: (-6.259,-15.594,28.502)
C4': (-5.107,-13.828,31.797)
C2': (-4.931,-11.550,32.429)
C2: (-3.263,-7.683,30.445)
N1: (-3.556,-7.193,29.234)
N3: (-3.386,-8.921,30.921)
N6: (-4.371,-7.518,27.118)
N7: (-4.737,-10.479,28.034)
N9: (-4.149,-11.064,30.121)
O5': (-6.118,-14.525,29.682)
O3': (-6.865,-12.870,33.240)
Image (generated by PyMOL):
PyMOL image
show in jmol