Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A1971:A1972
Extra
PDB:
ATOM 1 O3' U A1970 -12.658 107.368 122.099 1.00 45.39 O
ATOM 2 P A A1971 -12.271 106.570 123.427 1.00 51.62 P
ATOM 3 OP1 A A1971 -12.795 105.190 123.241 1.00 49.53 O
ATOM 4 OP2 A A1971 -12.687 107.397 124.602 1.00 44.04 O
ATOM 5 O5' A A1971 -10.664 106.553 123.381 1.00 38.36 O
ATOM 6 C5' A A1971 -9.972 105.502 122.745 1.00 38.75 C
ATOM 7 C4' A A1971 -8.571 105.926 122.352 1.00 35.60 C
ATOM 8 O4' A A1971 -8.634 107.105 121.509 1.00 54.48 O
ATOM 9 C3' A A1971 -7.656 106.300 123.501 1.00 34.73 C
ATOM 10 O3' A A1971 -6.981 105.146 123.920 1.00 29.57 O
ATOM 11 C2' A A1971 -6.681 107.235 122.798 1.00 43.57 C
ATOM 12 O2' A A1971 -5.714 106.514 122.062 1.00 39.76 O
ATOM 13 C1' A A1971 -7.582 107.993 121.825 1.00 47.13 C
ATOM 14 N9 A A1971 -8.207 109.164 122.412 1.00 36.51 N
ATOM 15 C8 A A1971 -9.533 109.323 122.677 1.00 47.72 C
ATOM 16 N7 A A1971 -9.837 110.472 123.230 1.00 48.32 N
ATOM 17 C5 A A1971 -8.618 111.113 123.338 1.00 44.60 C
ATOM 18 C6 A A1971 -8.263 112.380 123.842 1.00 40.60 C
ATOM 19 N6 A A1971 -9.152 113.237 124.348 1.00 50.17 N
ATOM 20 N1 A A1971 -6.961 112.723 123.804 1.00 37.88 N
ATOM 21 C2 A A1971 -6.088 111.841 123.292 1.00 49.44 C
ATOM 22 N3 A A1971 -6.306 110.619 122.783 1.00 43.21 N
ATOM 23 C4 A A1971 -7.606 110.315 122.838 1.00 37.03 C
ATOM 24 P A A1972 -7.000 104.779 125.461 1.00 39.86 P
ATOM 25 OP1 A A1972 -6.392 103.444 125.615 1.00 49.55 O
ATOM 26 OP2 A A1972 -8.366 105.025 125.960 1.00 49.26 O
ATOM 27 O5' A A1972 -6.059 105.876 126.142 1.00 44.51 O
TER
ATOM 1 O3' A B1971 -6.981 105.146 123.920 1.00 29.57 O
ATOM 2 P A B1972 -7.000 104.779 125.461 1.00 39.86 P
ATOM 3 OP1 A B1972 -6.392 103.444 125.615 1.00 49.55 O
ATOM 4 OP2 A B1972 -8.366 105.025 125.960 1.00 49.26 O
ATOM 5 O5' A B1972 -6.059 105.876 126.142 1.00 44.51 O
ATOM 6 C5' A B1972 -4.696 106.039 125.742 1.00 46.93 C
ATOM 7 C4' A B1972 -4.203 107.465 125.959 1.00 43.33 C
ATOM 8 O4' A B1972 -5.067 108.392 125.264 1.00 41.44 O
ATOM 9 C3' A B1972 -4.257 107.993 127.378 1.00 43.21 C
ATOM 10 O3' A B1972 -3.176 107.533 128.118 1.00 43.84 O
ATOM 11 C2' A B1972 -4.145 109.489 127.153 1.00 42.73 C
ATOM 12 O2' A B1972 -2.822 109.877 126.872 1.00 45.07 O
ATOM 13 C1' A B1972 -5.037 109.641 125.927 1.00 43.36 C
ATOM 14 N9 A B1972 -6.403 110.004 126.287 1.00 48.69 N
ATOM 15 C8 A B1972 -7.521 109.224 126.314 1.00 47.59 C
ATOM 16 N7 A B1972 -8.600 109.859 126.695 1.00 36.40 N
ATOM 17 C5 A B1972 -8.163 111.141 126.930 1.00 39.57 C
ATOM 18 C6 A B1972 -8.820 112.309 127.354 1.00 52.00 C
ATOM 19 N6 A B1972 -10.125 112.376 127.630 1.00 60.30 N
ATOM 20 N1 A B1972 -8.081 113.424 127.491 1.00 55.03 N
ATOM 21 C2 A B1972 -6.772 113.362 127.212 1.00 58.64 C
ATOM 22 N3 A B1972 -6.043 112.327 126.802 1.00 55.78 N
ATOM 23 C4 A B1972 -6.814 111.242 126.684 1.00 46.73 C
ATOM 24 P C B1973 -3.541 106.891 129.531 1.00 41.33 P
ATOM 25 OP1 C B1973 -2.377 106.079 129.948 1.00 53.16 O
ATOM 26 OP2 C B1973 -4.883 106.276 129.417 1.00 49.37 O
ATOM 27 O5' C B1973 -3.664 108.160 130.500 1.00 40.26 O
TER
ATOM 2 P A A1971 -12.271 106.570 123.427 1.00 51.62 P
ATOM 3 OP1 A A1971 -12.795 105.190 123.241 1.00 49.53 O
ATOM 4 OP2 A A1971 -12.687 107.397 124.602 1.00 44.04 O
ATOM 5 O5' A A1971 -10.664 106.553 123.381 1.00 38.36 O
ATOM 6 C5' A A1971 -9.972 105.502 122.745 1.00 38.75 C
ATOM 7 C4' A A1971 -8.571 105.926 122.352 1.00 35.60 C
ATOM 8 O4' A A1971 -8.634 107.105 121.509 1.00 54.48 O
ATOM 9 C3' A A1971 -7.656 106.300 123.501 1.00 34.73 C
ATOM 10 O3' A A1971 -6.981 105.146 123.920 1.00 29.57 O
ATOM 11 C2' A A1971 -6.681 107.235 122.798 1.00 43.57 C
ATOM 12 O2' A A1971 -5.714 106.514 122.062 1.00 39.76 O
ATOM 13 C1' A A1971 -7.582 107.993 121.825 1.00 47.13 C
ATOM 14 N9 A A1971 -8.207 109.164 122.412 1.00 36.51 N
ATOM 15 C8 A A1971 -9.533 109.323 122.677 1.00 47.72 C
ATOM 16 N7 A A1971 -9.837 110.472 123.230 1.00 48.32 N
ATOM 17 C5 A A1971 -8.618 111.113 123.338 1.00 44.60 C
ATOM 18 C6 A A1971 -8.263 112.380 123.842 1.00 40.60 C
ATOM 19 N6 A A1971 -9.152 113.237 124.348 1.00 50.17 N
ATOM 20 N1 A A1971 -6.961 112.723 123.804 1.00 37.88 N
ATOM 21 C2 A A1971 -6.088 111.841 123.292 1.00 49.44 C
ATOM 22 N3 A A1971 -6.306 110.619 122.783 1.00 43.21 N
ATOM 23 C4 A A1971 -7.606 110.315 122.838 1.00 37.03 C
ATOM 24 P A A1972 -7.000 104.779 125.461 1.00 39.86 P
ATOM 25 OP1 A A1972 -6.392 103.444 125.615 1.00 49.55 O
ATOM 26 OP2 A A1972 -8.366 105.025 125.960 1.00 49.26 O
ATOM 27 O5' A A1972 -6.059 105.876 126.142 1.00 44.51 O
TER
ATOM 1 O3' A B1971 -6.981 105.146 123.920 1.00 29.57 O
ATOM 2 P A B1972 -7.000 104.779 125.461 1.00 39.86 P
ATOM 3 OP1 A B1972 -6.392 103.444 125.615 1.00 49.55 O
ATOM 4 OP2 A B1972 -8.366 105.025 125.960 1.00 49.26 O
ATOM 5 O5' A B1972 -6.059 105.876 126.142 1.00 44.51 O
ATOM 6 C5' A B1972 -4.696 106.039 125.742 1.00 46.93 C
ATOM 7 C4' A B1972 -4.203 107.465 125.959 1.00 43.33 C
ATOM 8 O4' A B1972 -5.067 108.392 125.264 1.00 41.44 O
ATOM 9 C3' A B1972 -4.257 107.993 127.378 1.00 43.21 C
ATOM 10 O3' A B1972 -3.176 107.533 128.118 1.00 43.84 O
ATOM 11 C2' A B1972 -4.145 109.489 127.153 1.00 42.73 C
ATOM 12 O2' A B1972 -2.822 109.877 126.872 1.00 45.07 O
ATOM 13 C1' A B1972 -5.037 109.641 125.927 1.00 43.36 C
ATOM 14 N9 A B1972 -6.403 110.004 126.287 1.00 48.69 N
ATOM 15 C8 A B1972 -7.521 109.224 126.314 1.00 47.59 C
ATOM 16 N7 A B1972 -8.600 109.859 126.695 1.00 36.40 N
ATOM 17 C5 A B1972 -8.163 111.141 126.930 1.00 39.57 C
ATOM 18 C6 A B1972 -8.820 112.309 127.354 1.00 52.00 C
ATOM 19 N6 A B1972 -10.125 112.376 127.630 1.00 60.30 N
ATOM 20 N1 A B1972 -8.081 113.424 127.491 1.00 55.03 N
ATOM 21 C2 A B1972 -6.772 113.362 127.212 1.00 58.64 C
ATOM 22 N3 A B1972 -6.043 112.327 126.802 1.00 55.78 N
ATOM 23 C4 A B1972 -6.814 111.242 126.684 1.00 46.73 C
ATOM 24 P C B1973 -3.541 106.891 129.531 1.00 41.33 P
ATOM 25 OP1 C B1973 -2.377 106.079 129.948 1.00 53.16 O
ATOM 26 OP2 C B1973 -4.883 106.276 129.417 1.00 49.37 O
ATOM 27 O5' C B1973 -3.664 108.160 130.500 1.00 40.26 O
TER
Atoms:
OP1: (-12.795,105.190,123.241)
OP2: (-12.687,107.397,124.602)
C3': (-7.656,106.300,123.501)
C1': (-7.582,107.993,121.825)
C5': (-9.972,105.502,122.745)
O4': (-8.634,107.105,121.509)
C8: (-9.533,109.323,122.677)
O2': (-5.714,106.514,122.062)
C6: (-8.263,112.380,123.842)
C5: (-8.618,111.113,123.338)
C4: (-7.606,110.315,122.838)
P: (-12.271,106.570,123.427)
C4': (-8.571,105.926,122.352)
C2': (-6.681,107.235,122.798)
C2: (-6.088,111.841,123.292)
N1: (-6.961,112.723,123.804)
N3: (-6.306,110.619,122.783)
N6: (-9.152,113.237,124.348)
N7: (-9.837,110.472,123.230)
N9: (-8.207,109.164,122.412)
O5': (-10.664,106.553,123.381)
O3': (-6.981,105.146,123.920)
OP2: (-12.687,107.397,124.602)
C3': (-7.656,106.300,123.501)
C1': (-7.582,107.993,121.825)
C5': (-9.972,105.502,122.745)
O4': (-8.634,107.105,121.509)
C8: (-9.533,109.323,122.677)
O2': (-5.714,106.514,122.062)
C6: (-8.263,112.380,123.842)
C5: (-8.618,111.113,123.338)
C4: (-7.606,110.315,122.838)
P: (-12.271,106.570,123.427)
C4': (-8.571,105.926,122.352)
C2': (-6.681,107.235,122.798)
C2: (-6.088,111.841,123.292)
N1: (-6.961,112.723,123.804)
N3: (-6.306,110.619,122.783)
N6: (-9.152,113.237,124.348)
N7: (-9.837,110.472,123.230)
N9: (-8.207,109.164,122.412)
O5': (-10.664,106.553,123.381)
O3': (-6.981,105.146,123.920)
OP1: (-6.392,103.444,125.615)
OP2: (-8.366,105.025,125.960)
C3': (-4.257,107.993,127.378)
C1': (-5.037,109.641,125.927)
C5': (-4.696,106.039,125.742)
O4': (-5.067,108.392,125.264)
C8: (-7.521,109.224,126.314)
O2': (-2.822,109.877,126.872)
C6: (-8.820,112.309,127.354)
C5: (-8.163,111.141,126.930)
C4: (-6.814,111.242,126.684)
P: (-7.000,104.779,125.461)
C4': (-4.203,107.465,125.959)
C2': (-4.145,109.489,127.153)
C2: (-6.772,113.362,127.212)
N1: (-8.081,113.424,127.491)
N3: (-6.043,112.327,126.802)
N6: (-10.125,112.376,127.630)
N7: (-8.600,109.859,126.695)
N9: (-6.403,110.004,126.287)
O5': (-6.059,105.876,126.142)
O3': (-3.176,107.533,128.118)
OP2: (-8.366,105.025,125.960)
C3': (-4.257,107.993,127.378)
C1': (-5.037,109.641,125.927)
C5': (-4.696,106.039,125.742)
O4': (-5.067,108.392,125.264)
C8: (-7.521,109.224,126.314)
O2': (-2.822,109.877,126.872)
C6: (-8.820,112.309,127.354)
C5: (-8.163,111.141,126.930)
C4: (-6.814,111.242,126.684)
P: (-7.000,104.779,125.461)
C4': (-4.203,107.465,125.959)
C2': (-4.145,109.489,127.153)
C2: (-6.772,113.362,127.212)
N1: (-8.081,113.424,127.491)
N3: (-6.043,112.327,126.802)
N6: (-10.125,112.376,127.630)
N7: (-8.600,109.859,126.695)
N9: (-6.403,110.004,126.287)
O5': (-6.059,105.876,126.142)
O3': (-3.176,107.533,128.118)
Image (generated by PyMOL):