ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0305:0307

Extra

PDB:
ATOM 1 O3' A A 304 9.335 147.690 43.673 1.00 48.83 O
ATOM 2 P A A 305 8.020 147.071 42.975 1.00 48.27 P
ATOM 3 OP1 A A 305 8.023 147.499 41.564 1.00 49.49 O
ATOM 4 OP2 A A 305 6.856 147.399 43.836 1.00 48.01 O
ATOM 5 O5' A A 305 8.250 145.492 42.954 1.00 49.04 O
ATOM 6 C5' A A 305 9.370 144.928 42.244 1.00 50.51 C
ATOM 7 C4' A A 305 9.268 143.414 42.160 1.00 51.73 C
ATOM 8 O4' A A 305 8.927 142.878 43.476 1.00 50.65 O
ATOM 9 C3' A A 305 8.248 142.807 41.187 1.00 50.66 C
ATOM 10 O3' A A 305 8.785 141.570 40.697 1.00 52.94 O
ATOM 11 C2' A A 305 7.102 142.425 42.122 1.00 50.61 C
ATOM 12 O2' A A 305 6.311 141.371 41.610 1.00 53.05 O
ATOM 13 C1' A A 305 7.900 141.925 43.322 1.00 50.19 C
ATOM 14 N9 A A 305 7.210 141.723 44.599 1.00 46.76 N
ATOM 15 C8 A A 305 6.097 142.349 45.096 1.00 47.47 C
ATOM 16 N7 A A 305 5.721 141.905 46.271 1.00 46.95 N
ATOM 17 C5 A A 305 6.654 140.922 46.570 1.00 46.46 C
ATOM 18 C6 A A 305 6.807 140.061 47.675 1.00 45.31 C
ATOM 19 N6 A A 305 5.989 140.053 48.729 1.00 45.08 N
ATOM 20 N1 A A 305 7.840 139.195 47.656 1.00 41.94 N
ATOM 21 C2 A A 305 8.658 139.200 46.602 1.00 42.70 C
ATOM 22 N3 A A 305 8.622 139.956 45.508 1.00 43.79 N
ATOM 23 C4 A A 305 7.581 140.806 45.553 1.00 46.09 C
ATOM 24 P C A 306 9.480 141.494 39.251 1.00 55.03 P
ATOM 25 OP1 C A 306 10.263 142.741 39.049 1.00 53.94 O
ATOM 26 OP2 C A 306 8.447 141.103 38.255 1.00 55.94 O
ATOM 27 O5' C A 306 10.504 140.281 39.393 1.00 53.59 O
TER

ATOM 1 O3' C B 306 10.099 136.749 42.065 1.00 56.47 O
ATOM 2 P A B 307 8.848 135.740 42.015 1.00 57.25 P
ATOM 3 OP1 A B 307 9.404 134.392 41.736 1.00 57.93 O
ATOM 4 OP2 A B 307 7.788 136.295 41.116 1.00 59.34 O
ATOM 5 O5' A B 307 8.278 135.753 43.500 1.00 53.96 O
ATOM 6 C5' A B 307 8.872 134.959 44.538 1.00 51.19 C
ATOM 7 C4' A B 307 7.947 134.915 45.725 1.00 51.90 C
ATOM 8 O4' A B 307 7.732 136.266 46.213 1.00 50.73 O
ATOM 9 C3' A B 307 6.557 134.399 45.398 1.00 52.99 C
ATOM 10 O3' A B 307 6.523 132.983 45.481 1.00 55.18 O
ATOM 11 C2' A B 307 5.693 135.083 46.445 1.00 52.30 C
ATOM 12 O2' A B 307 5.806 134.457 47.708 1.00 52.27 O
ATOM 13 C1' A B 307 6.360 136.459 46.515 1.00 51.22 C
ATOM 14 N9 A B 307 5.835 137.445 45.565 1.00 50.09 N
ATOM 15 C8 A B 307 6.430 137.857 44.399 1.00 48.75 C
ATOM 16 N7 A B 307 5.759 138.777 43.758 1.00 49.49 N
ATOM 17 C5 A B 307 4.636 138.980 44.545 1.00 48.58 C
ATOM 18 C6 A B 307 3.530 139.842 44.410 1.00 49.03 C
ATOM 19 N6 A B 307 3.368 140.695 43.390 1.00 47.36 N
ATOM 20 N1 A B 307 2.585 139.800 45.372 1.00 48.34 N
ATOM 21 C2 A B 307 2.751 138.954 46.394 1.00 49.27 C
ATOM 22 N3 A B 307 3.746 138.099 46.633 1.00 49.14 N
ATOM 23 C4 A B 307 4.666 138.162 45.660 1.00 48.59 C
ATOM 24 P G B 308 5.496 132.162 44.568 1.00 57.51 P
ATOM 25 OP1 G B 308 5.750 130.715 44.799 1.00 57.33 O
ATOM 26 OP2 G B 308 5.548 132.704 43.187 1.00 56.62 O
ATOM 27 O5' G B 308 4.086 132.533 45.199 1.00 57.15 O
TER

Atoms:
OP1: (8.023,147.499,41.564)
OP2: (6.856,147.399,43.836)
C3': (8.248,142.807,41.187)
C1': (7.900,141.925,43.322)
C5': (9.370,144.928,42.244)
O4': (8.927,142.878,43.476)
C8: (6.097,142.349,45.096)
O2': (6.311,141.371,41.610)
C6: (6.807,140.061,47.675)
C5: (6.654,140.922,46.570)
C4: (7.581,140.806,45.553)
P: (8.020,147.071,42.975)
C4': (9.268,143.414,42.160)
C2': (7.102,142.425,42.122)
C2: (8.658,139.200,46.602)
N1: (7.840,139.195,47.656)
N3: (8.622,139.956,45.508)
N6: (5.989,140.053,48.729)
N7: (5.721,141.905,46.271)
N9: (7.210,141.723,44.599)
O5': (8.250,145.492,42.954)
O3': (8.785,141.570,40.697)
OP1: (9.404,134.392,41.736)
OP2: (7.788,136.295,41.116)
C3': (6.557,134.399,45.398)
C1': (6.360,136.459,46.515)
C5': (8.872,134.959,44.538)
O4': (7.732,136.266,46.213)
C8: (6.430,137.857,44.399)
O2': (5.806,134.457,47.708)
C6: (3.530,139.842,44.410)
C5: (4.636,138.980,44.545)
C4: (4.666,138.162,45.660)
P: (8.848,135.740,42.015)
C4': (7.947,134.915,45.725)
C2': (5.693,135.083,46.445)
C2: (2.751,138.954,46.394)
N1: (2.585,139.800,45.372)
N3: (3.746,138.099,46.633)
N6: (3.368,140.695,43.390)
N7: (5.759,138.777,43.758)
N9: (5.835,137.445,45.565)
O5': (8.278,135.753,43.500)
O3': (6.523,132.983,45.481)
Image (generated by PyMOL):
PyMOL image
show in jmol