ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A599:A600

Extra

PDB:
ATOM 1 O3' C A 598 -24.067 29.955 78.025 1.00 19.69 O
ATOM 2 P A A 599 -22.842 30.803 78.618 1.00 17.46 P
ATOM 3 OP1 A A 599 -22.056 31.396 77.507 1.00 21.16 O
ATOM 4 OP2 A A 599 -22.160 29.956 79.612 1.00 20.58 O
ATOM 5 O5' A A 599 -23.571 31.986 79.399 1.00 16.41 O
ATOM 6 C5' A A 599 -24.327 32.959 78.671 1.00 16.16 C
ATOM 7 C4' A A 599 -25.127 33.808 79.613 1.00 17.39 C
ATOM 8 O4' A A 599 -26.041 32.968 80.354 1.00 18.89 O
ATOM 9 C3' A A 599 -24.320 34.535 80.668 1.00 17.91 C
ATOM 10 O3' A A 599 -23.816 35.759 80.157 1.00 17.12 O
ATOM 11 C2' A A 599 -25.341 34.733 81.782 1.00 18.61 C
ATOM 12 O2' A A 599 -26.185 35.853 81.549 1.00 19.46 O
ATOM 13 C1' A A 599 -26.157 33.440 81.681 1.00 19.61 C
ATOM 14 N9 A A 599 -25.684 32.371 82.560 1.00 30.50 N
ATOM 15 C8 A A 599 -24.684 31.465 82.307 1.00 30.77 C
ATOM 16 N7 A A 599 -24.510 30.593 83.268 1.00 32.05 N
ATOM 17 C5 A A 599 -25.454 30.954 84.218 1.00 31.56 C
ATOM 18 C6 A A 599 -25.795 30.409 85.456 1.00 31.87 C
ATOM 19 N6 A A 599 -25.224 29.318 85.961 1.00 33.50 N
ATOM 20 N1 A A 599 -26.768 31.015 86.165 1.00 31.65 N
ATOM 21 C2 A A 599 -27.365 32.079 85.641 1.00 30.74 C
ATOM 22 N3 A A 599 -27.149 32.672 84.476 1.00 30.14 N
ATOM 23 C4 A A 599 -26.170 32.055 83.804 1.00 31.19 C
ATOM 24 P A A 600 -22.465 36.373 80.763 1.00 36.72 P
ATOM 25 OP1 A A 600 -22.282 37.680 80.092 1.00 14.31 O
ATOM 26 OP2 A A 600 -21.360 35.383 80.726 1.00 13.06 O
ATOM 27 O5' A A 600 -22.841 36.606 82.291 1.00 36.15 O
TER

ATOM 1 O3' A B 599 -23.816 35.759 80.157 1.00 17.12 O
ATOM 2 P A B 600 -22.465 36.373 80.763 1.00 36.72 P
ATOM 3 OP1 A B 600 -22.282 37.680 80.092 1.00 14.31 O
ATOM 4 OP2 A B 600 -21.360 35.383 80.726 1.00 13.06 O
ATOM 5 O5' A B 600 -22.841 36.606 82.291 1.00 36.15 O
ATOM 6 C5' A B 600 -23.874 37.529 82.649 1.00 36.99 C
ATOM 7 C4' A B 600 -24.074 37.536 84.140 1.00 36.37 C
ATOM 8 O4' A B 600 -24.813 36.360 84.554 1.00 35.61 O
ATOM 9 C3' A B 600 -22.807 37.514 84.977 1.00 36.49 C
ATOM 10 O3' A B 600 -22.218 38.800 85.106 1.00 35.95 O
ATOM 11 C2' A B 600 -23.313 36.966 86.302 1.00 37.71 C
ATOM 12 O2' A B 600 -23.912 37.971 87.099 1.00 40.17 O
ATOM 13 C1' A B 600 -24.360 35.949 85.831 1.00 36.43 C
ATOM 14 N9 A B 600 -23.739 34.633 85.691 1.00 32.20 N
ATOM 15 C8 A B 600 -22.903 34.215 84.690 1.00 31.14 C
ATOM 16 N7 A B 600 -22.392 33.027 84.894 1.00 30.87 N
ATOM 17 C5 A B 600 -22.957 32.623 86.092 1.00 31.62 C
ATOM 18 C6 A B 600 -22.796 31.473 86.861 1.00 31.29 C
ATOM 19 N6 A B 600 -21.968 30.490 86.532 1.00 32.51 N
ATOM 20 N1 A B 600 -23.508 31.368 88.005 1.00 31.75 N
ATOM 21 C2 A B 600 -24.314 32.371 88.345 1.00 33.24 C
ATOM 22 N3 A B 600 -24.538 33.517 87.712 1.00 33.30 N
ATOM 23 C4 A B 600 -23.816 33.584 86.578 1.00 32.55 C
ATOM 24 P C B 601 -20.621 38.932 85.281 1.00 19.26 P
ATOM 25 OP1 C B 601 -20.325 40.361 85.549 1.00 41.93 O
ATOM 26 OP2 C B 601 -19.928 38.248 84.176 1.00 41.06 O
ATOM 27 O5' C B 601 -20.354 38.123 86.614 1.00 17.57 O
TER

Atoms:
OP1: (-22.056,31.396,77.507)
OP2: (-22.160,29.956,79.612)
C3': (-24.320,34.535,80.668)
C1': (-26.157,33.440,81.681)
C5': (-24.327,32.959,78.671)
O4': (-26.041,32.968,80.354)
C8: (-24.684,31.465,82.307)
O2': (-26.185,35.853,81.549)
C6: (-25.795,30.409,85.456)
C5: (-25.454,30.954,84.218)
C4: (-26.170,32.055,83.804)
P: (-22.842,30.803,78.618)
C4': (-25.127,33.808,79.613)
C2': (-25.341,34.733,81.782)
C2: (-27.365,32.079,85.641)
N1: (-26.768,31.015,86.165)
N3: (-27.149,32.672,84.476)
N6: (-25.224,29.318,85.961)
N7: (-24.510,30.593,83.268)
N9: (-25.684,32.371,82.560)
O5': (-23.571,31.986,79.399)
O3': (-23.816,35.759,80.157)
OP1: (-22.282,37.680,80.092)
OP2: (-21.360,35.383,80.726)
C3': (-22.807,37.514,84.977)
C1': (-24.360,35.949,85.831)
C5': (-23.874,37.529,82.649)
O4': (-24.813,36.360,84.554)
C8: (-22.903,34.215,84.690)
O2': (-23.912,37.971,87.099)
C6: (-22.796,31.473,86.861)
C5: (-22.957,32.623,86.092)
C4: (-23.816,33.584,86.578)
P: (-22.465,36.373,80.763)
C4': (-24.074,37.536,84.140)
C2': (-23.313,36.966,86.302)
C2: (-24.314,32.371,88.345)
N1: (-23.508,31.368,88.005)
N3: (-24.538,33.517,87.712)
N6: (-21.968,30.490,86.532)
N7: (-22.392,33.027,84.894)
N9: (-23.739,34.633,85.691)
O5': (-22.841,36.606,82.291)
O3': (-22.218,38.800,85.106)
Image (generated by PyMOL):
PyMOL image
show in jmol