Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A28:A43
Extra
PDB:
ATOM 1 O3' G A 27 -4.901 -10.657 29.016 1.00 53.00 O
ATOM 2 P A A 28 -5.361 -9.595 30.141 1.00 49.89 P
ATOM 3 OP1 A A 28 -4.841 -8.250 29.817 1.00 48.97 O
ATOM 4 OP2 A A 28 -4.962 -10.160 31.472 1.00 49.05 O
ATOM 5 O5' A A 28 -6.940 -9.474 29.912 1.00 41.88 O
ATOM 6 C5' A A 28 -7.804 -9.925 30.928 1.00 44.33 C
ATOM 7 C4' A A 28 -9.237 -9.912 30.463 1.00 44.70 C
ATOM 8 O4' A A 28 -9.423 -9.054 29.304 1.00 45.67 O
ATOM 9 C3' A A 28 -9.623 -11.258 29.943 1.00 41.69 C
ATOM 10 O3' A A 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 11 C2' A A 28 -10.829 -10.946 29.066 1.00 44.06 C
ATOM 12 O2' A A 28 -12.092 -10.890 29.744 1.00 41.43 O
ATOM 13 C1' A A 28 -10.431 -9.602 28.475 1.00 43.21 C
ATOM 14 N9 A A 28 -9.892 -9.678 27.110 1.00 45.99 N
ATOM 15 C8 A A 28 -8.717 -9.137 26.642 1.00 44.00 C
ATOM 16 N7 A A 28 -8.499 -9.381 25.322 1.00 41.25 N
ATOM 17 C5 A A 28 -9.617 -10.114 24.928 1.00 43.20 C
ATOM 18 C6 A A 28 -10.022 -10.615 23.652 1.00 41.07 C
ATOM 19 N6 A A 28 -9.263 -10.453 22.535 1.00 35.28 N
ATOM 20 N1 A A 28 -11.195 -11.304 23.619 1.00 41.06 N
ATOM 21 C2 A A 28 -11.919 -11.449 24.727 1.00 40.53 C
ATOM 22 N3 A A 28 -11.638 -10.984 25.949 1.00 41.72 N
ATOM 23 C4 A A 28 -10.469 -10.319 26.001 1.00 45.18 C
ATOM 24 P G A 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 25 OP1 G A 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 26 OP2 G A 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 27 O5' G A 29 -10.625 -14.143 30.280 1.00 42.69 O
TER
ATOM 1 O3' A B 42 -5.817 -6.619 18.062 1.00 42.36 O
ATOM 2 P A B 43 -6.767 -6.304 19.336 1.00 40.06 P
ATOM 3 OP1 A B 43 -6.868 -4.869 19.545 1.00 38.96 O
ATOM 4 OP2 A B 43 -6.295 -7.217 20.406 1.00 41.22 O
ATOM 5 O5' A B 43 -8.255 -6.722 18.927 1.00 38.15 O
ATOM 6 C5' A B 43 -8.431 -8.132 18.458 1.00 36.65 C
ATOM 7 C4' A B 43 -9.817 -8.572 18.876 1.00 33.68 C
ATOM 8 O4' A B 43 -10.758 -7.741 18.165 1.00 37.43 O
ATOM 9 C3' A B 43 -10.238 -9.993 18.537 1.00 32.45 C
ATOM 10 O3' A B 43 -9.948 -10.875 19.598 1.00 32.69 O
ATOM 11 C2' A B 43 -11.743 -9.828 18.523 1.00 36.19 C
ATOM 12 O2' A B 43 -12.319 -9.754 19.797 1.00 34.25 O
ATOM 13 C1' A B 43 -11.909 -8.496 17.855 1.00 33.87 C
ATOM 14 N9 A B 43 -12.062 -8.499 16.402 1.00 29.93 N
ATOM 15 C8 A B 43 -11.211 -7.904 15.532 1.00 29.39 C
ATOM 16 N7 A B 43 -11.564 -8.056 14.279 1.00 28.38 N
ATOM 17 C5 A B 43 -12.729 -8.756 14.361 1.00 25.26 C
ATOM 18 C6 A B 43 -13.594 -9.208 13.344 1.00 33.47 C
ATOM 19 N6 A B 43 -13.328 -8.952 12.049 1.00 30.68 N
ATOM 20 N1 A B 43 -14.641 -9.989 13.738 1.00 34.89 N
ATOM 21 C2 A B 43 -14.838 -10.259 15.029 1.00 31.27 C
ATOM 22 N3 A B 43 -14.096 -9.863 16.057 1.00 35.55 N
ATOM 23 C4 A B 43 -13.045 -9.097 15.644 1.00 30.12 C
ATOM 24 P C B 44 -8.771 -11.912 19.391 1.00 37.69 P
ATOM 25 OP1 C B 44 -8.673 -12.812 20.567 1.00 36.27 O
ATOM 26 OP2 C B 44 -7.573 -11.262 18.876 1.00 27.63 O
ATOM 27 O5' C B 44 -9.557 -12.886 18.366 1.00 36.22 O
TER
ATOM 2 P A A 28 -5.361 -9.595 30.141 1.00 49.89 P
ATOM 3 OP1 A A 28 -4.841 -8.250 29.817 1.00 48.97 O
ATOM 4 OP2 A A 28 -4.962 -10.160 31.472 1.00 49.05 O
ATOM 5 O5' A A 28 -6.940 -9.474 29.912 1.00 41.88 O
ATOM 6 C5' A A 28 -7.804 -9.925 30.928 1.00 44.33 C
ATOM 7 C4' A A 28 -9.237 -9.912 30.463 1.00 44.70 C
ATOM 8 O4' A A 28 -9.423 -9.054 29.304 1.00 45.67 O
ATOM 9 C3' A A 28 -9.623 -11.258 29.943 1.00 41.69 C
ATOM 10 O3' A A 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 11 C2' A A 28 -10.829 -10.946 29.066 1.00 44.06 C
ATOM 12 O2' A A 28 -12.092 -10.890 29.744 1.00 41.43 O
ATOM 13 C1' A A 28 -10.431 -9.602 28.475 1.00 43.21 C
ATOM 14 N9 A A 28 -9.892 -9.678 27.110 1.00 45.99 N
ATOM 15 C8 A A 28 -8.717 -9.137 26.642 1.00 44.00 C
ATOM 16 N7 A A 28 -8.499 -9.381 25.322 1.00 41.25 N
ATOM 17 C5 A A 28 -9.617 -10.114 24.928 1.00 43.20 C
ATOM 18 C6 A A 28 -10.022 -10.615 23.652 1.00 41.07 C
ATOM 19 N6 A A 28 -9.263 -10.453 22.535 1.00 35.28 N
ATOM 20 N1 A A 28 -11.195 -11.304 23.619 1.00 41.06 N
ATOM 21 C2 A A 28 -11.919 -11.449 24.727 1.00 40.53 C
ATOM 22 N3 A A 28 -11.638 -10.984 25.949 1.00 41.72 N
ATOM 23 C4 A A 28 -10.469 -10.319 26.001 1.00 45.18 C
ATOM 24 P G A 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 25 OP1 G A 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 26 OP2 G A 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 27 O5' G A 29 -10.625 -14.143 30.280 1.00 42.69 O
TER
ATOM 1 O3' A B 42 -5.817 -6.619 18.062 1.00 42.36 O
ATOM 2 P A B 43 -6.767 -6.304 19.336 1.00 40.06 P
ATOM 3 OP1 A B 43 -6.868 -4.869 19.545 1.00 38.96 O
ATOM 4 OP2 A B 43 -6.295 -7.217 20.406 1.00 41.22 O
ATOM 5 O5' A B 43 -8.255 -6.722 18.927 1.00 38.15 O
ATOM 6 C5' A B 43 -8.431 -8.132 18.458 1.00 36.65 C
ATOM 7 C4' A B 43 -9.817 -8.572 18.876 1.00 33.68 C
ATOM 8 O4' A B 43 -10.758 -7.741 18.165 1.00 37.43 O
ATOM 9 C3' A B 43 -10.238 -9.993 18.537 1.00 32.45 C
ATOM 10 O3' A B 43 -9.948 -10.875 19.598 1.00 32.69 O
ATOM 11 C2' A B 43 -11.743 -9.828 18.523 1.00 36.19 C
ATOM 12 O2' A B 43 -12.319 -9.754 19.797 1.00 34.25 O
ATOM 13 C1' A B 43 -11.909 -8.496 17.855 1.00 33.87 C
ATOM 14 N9 A B 43 -12.062 -8.499 16.402 1.00 29.93 N
ATOM 15 C8 A B 43 -11.211 -7.904 15.532 1.00 29.39 C
ATOM 16 N7 A B 43 -11.564 -8.056 14.279 1.00 28.38 N
ATOM 17 C5 A B 43 -12.729 -8.756 14.361 1.00 25.26 C
ATOM 18 C6 A B 43 -13.594 -9.208 13.344 1.00 33.47 C
ATOM 19 N6 A B 43 -13.328 -8.952 12.049 1.00 30.68 N
ATOM 20 N1 A B 43 -14.641 -9.989 13.738 1.00 34.89 N
ATOM 21 C2 A B 43 -14.838 -10.259 15.029 1.00 31.27 C
ATOM 22 N3 A B 43 -14.096 -9.863 16.057 1.00 35.55 N
ATOM 23 C4 A B 43 -13.045 -9.097 15.644 1.00 30.12 C
ATOM 24 P C B 44 -8.771 -11.912 19.391 1.00 37.69 P
ATOM 25 OP1 C B 44 -8.673 -12.812 20.567 1.00 36.27 O
ATOM 26 OP2 C B 44 -7.573 -11.262 18.876 1.00 27.63 O
ATOM 27 O5' C B 44 -9.557 -12.886 18.366 1.00 36.22 O
TER
Atoms:
OP1: (-4.841,-8.250,29.817)
OP2: (-4.962,-10.160,31.472)
C3': (-9.623,-11.258,29.943)
C1': (-10.431,-9.602,28.475)
C5': (-7.804,-9.925,30.928)
O4': (-9.423,-9.054,29.304)
C8: (-8.717,-9.137,26.642)
O2': (-12.092,-10.890,29.744)
C6: (-10.022,-10.615,23.652)
C5: (-9.617,-10.114,24.928)
C4: (-10.469,-10.319,26.001)
P: (-5.361,-9.595,30.141)
C4': (-9.237,-9.912,30.463)
C2': (-10.829,-10.946,29.066)
C2: (-11.919,-11.449,24.727)
N1: (-11.195,-11.304,23.619)
N3: (-11.638,-10.984,25.949)
N6: (-9.263,-10.453,22.535)
N7: (-8.499,-9.381,25.322)
N9: (-9.892,-9.678,27.110)
O5': (-6.940,-9.474,29.912)
O3': (-10.062,-11.924,31.063)
OP2: (-4.962,-10.160,31.472)
C3': (-9.623,-11.258,29.943)
C1': (-10.431,-9.602,28.475)
C5': (-7.804,-9.925,30.928)
O4': (-9.423,-9.054,29.304)
C8: (-8.717,-9.137,26.642)
O2': (-12.092,-10.890,29.744)
C6: (-10.022,-10.615,23.652)
C5: (-9.617,-10.114,24.928)
C4: (-10.469,-10.319,26.001)
P: (-5.361,-9.595,30.141)
C4': (-9.237,-9.912,30.463)
C2': (-10.829,-10.946,29.066)
C2: (-11.919,-11.449,24.727)
N1: (-11.195,-11.304,23.619)
N3: (-11.638,-10.984,25.949)
N6: (-9.263,-10.453,22.535)
N7: (-8.499,-9.381,25.322)
N9: (-9.892,-9.678,27.110)
O5': (-6.940,-9.474,29.912)
O3': (-10.062,-11.924,31.063)
OP1: (-6.868,-4.869,19.545)
OP2: (-6.295,-7.217,20.406)
C3': (-10.238,-9.993,18.537)
C1': (-11.909,-8.496,17.855)
C5': (-8.431,-8.132,18.458)
O4': (-10.758,-7.741,18.165)
C8: (-11.211,-7.904,15.532)
O2': (-12.319,-9.754,19.797)
C6: (-13.594,-9.208,13.344)
C5: (-12.729,-8.756,14.361)
C4: (-13.045,-9.097,15.644)
P: (-6.767,-6.304,19.336)
C4': (-9.817,-8.572,18.876)
C2': (-11.743,-9.828,18.523)
C2: (-14.838,-10.259,15.029)
N1: (-14.641,-9.989,13.738)
N3: (-14.096,-9.863,16.057)
N6: (-13.328,-8.952,12.049)
N7: (-11.564,-8.056,14.279)
N9: (-12.062,-8.499,16.402)
O5': (-8.255,-6.722,18.927)
O3': (-9.948,-10.875,19.598)
OP2: (-6.295,-7.217,20.406)
C3': (-10.238,-9.993,18.537)
C1': (-11.909,-8.496,17.855)
C5': (-8.431,-8.132,18.458)
O4': (-10.758,-7.741,18.165)
C8: (-11.211,-7.904,15.532)
O2': (-12.319,-9.754,19.797)
C6: (-13.594,-9.208,13.344)
C5: (-12.729,-8.756,14.361)
C4: (-13.045,-9.097,15.644)
P: (-6.767,-6.304,19.336)
C4': (-9.817,-8.572,18.876)
C2': (-11.743,-9.828,18.523)
C2: (-14.838,-10.259,15.029)
N1: (-14.641,-9.989,13.738)
N3: (-14.096,-9.863,16.057)
N6: (-13.328,-8.952,12.049)
N7: (-11.564,-8.056,14.279)
N9: (-12.062,-8.499,16.402)
O5': (-8.255,-6.722,18.927)
O3': (-9.948,-10.875,19.598)
Image (generated by PyMOL):