ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0366:0398

Extra

PDB:
ATOM 1 O3' C A 365 92.639 102.810 5.952 1.00 66.38 O
ATOM 2 P A A 366 92.804 102.291 7.466 1.00 68.44 P
ATOM 3 OP1 A A 366 93.491 103.381 8.195 1.00 67.90 O
ATOM 4 OP2 A A 366 93.402 100.925 7.462 1.00 67.06 O
ATOM 5 O5' A A 366 91.304 102.195 8.003 1.00 66.25 O
ATOM 6 C5' A A 366 90.508 103.385 8.173 1.00 65.96 C
ATOM 7 C4' A A 366 89.079 103.031 8.523 1.00 67.11 C
ATOM 8 O4' A A 366 88.454 102.329 7.417 1.00 68.49 O
ATOM 9 C3' A A 366 88.869 102.107 9.713 1.00 66.74 C
ATOM 10 O3' A A 366 88.937 102.818 10.941 1.00 64.83 O
ATOM 11 C2' A A 366 87.473 101.559 9.446 1.00 67.62 C
ATOM 12 O2' A A 366 86.441 102.461 9.798 1.00 68.35 O
ATOM 13 C1' A A 366 87.498 101.407 7.922 1.00 68.32 C
ATOM 14 N9 A A 366 87.880 100.059 7.502 1.00 68.88 N
ATOM 15 C8 A A 366 89.142 99.540 7.303 1.00 68.93 C
ATOM 16 N7 A A 366 89.142 98.280 6.944 1.00 68.22 N
ATOM 17 C5 A A 366 87.794 97.946 6.897 1.00 68.08 C
ATOM 18 C6 A A 366 87.126 96.751 6.586 1.00 67.73 C
ATOM 19 N6 A A 366 87.749 95.622 6.254 1.00 68.10 N
ATOM 20 N1 A A 366 85.776 96.755 6.633 1.00 68.78 N
ATOM 21 C2 A A 366 85.148 97.888 6.977 1.00 68.65 C
ATOM 22 N3 A A 366 85.663 99.071 7.294 1.00 68.76 N
ATOM 23 C4 A A 366 87.007 99.033 7.235 1.00 68.63 C
ATOM 24 P G A 367 89.477 102.078 12.260 1.00 64.31 P
ATOM 25 OP1 G A 367 90.790 101.450 11.956 1.00 62.55 O
ATOM 26 OP2 G A 367 88.367 101.244 12.790 1.00 63.56 O
ATOM 27 O5' G A 367 89.745 103.275 13.275 1.00 61.95 O
TER

ATOM 1 O3' U B 397 92.823 93.338 9.481 1.00 71.64 O
ATOM 2 P A B 398 92.678 93.059 7.906 1.00 71.60 P
ATOM 3 OP1 A B 398 93.746 92.114 7.479 1.00 72.93 O
ATOM 4 OP2 A B 398 92.529 94.359 7.212 1.00 71.62 O
ATOM 5 O5' A B 398 91.278 92.314 7.806 1.00 72.64 O
ATOM 6 C5' A B 398 91.057 91.086 8.509 1.00 73.26 C
ATOM 7 C4' A B 398 89.589 90.772 8.544 1.00 75.26 C
ATOM 8 O4' A B 398 88.924 91.693 9.456 1.00 74.86 O
ATOM 9 C3' A B 398 88.868 90.894 7.203 1.00 75.72 C
ATOM 10 O3' A B 398 87.877 89.881 7.081 1.00 78.85 O
ATOM 11 C2' A B 398 88.197 92.259 7.312 1.00 74.80 C
ATOM 12 O2' A B 398 87.031 92.373 6.524 1.00 74.45 O
ATOM 13 C1' A B 398 87.834 92.294 8.792 1.00 75.26 C
ATOM 14 N9 A B 398 87.634 93.646 9.311 1.00 76.06 N
ATOM 15 C8 A B 398 88.567 94.616 9.598 1.00 75.54 C
ATOM 16 N7 A B 398 88.044 95.744 10.014 1.00 75.47 N
ATOM 17 C5 A B 398 86.676 95.500 10.010 1.00 76.17 C
ATOM 18 C6 A B 398 85.567 96.305 10.335 1.00 77.21 C
ATOM 19 N6 A B 398 85.667 97.574 10.746 1.00 77.61 N
ATOM 20 N1 A B 398 84.335 95.755 10.219 1.00 77.64 N
ATOM 21 C2 A B 398 84.236 94.483 9.805 1.00 76.49 C
ATOM 22 N3 A B 398 85.200 93.631 9.467 1.00 75.62 N
ATOM 23 C4 A B 398 86.410 94.209 9.591 1.00 75.98 C
ATOM 24 P A B 399 88.099 88.675 6.044 1.00 79.96 P
ATOM 25 OP1 A B 399 88.622 89.250 4.772 1.00 79.88 O
ATOM 26 OP2 A B 399 86.860 87.852 6.017 1.00 79.12 O
ATOM 27 O5' A B 399 89.269 87.831 6.721 1.00 79.31 O
TER

Atoms:
OP1: (93.491,103.381,8.195)
OP2: (93.402,100.925,7.462)
C3': (88.869,102.107,9.713)
C1': (87.498,101.407,7.922)
C5': (90.508,103.385,8.173)
O4': (88.454,102.329,7.417)
C8: (89.142,99.540,7.303)
O2': (86.441,102.461,9.798)
C6: (87.126,96.751,6.586)
C5: (87.794,97.946,6.897)
C4: (87.007,99.033,7.235)
P: (92.804,102.291,7.466)
C4': (89.079,103.031,8.523)
C2': (87.473,101.559,9.446)
C2: (85.148,97.888,6.977)
N1: (85.776,96.755,6.633)
N3: (85.663,99.071,7.294)
N6: (87.749,95.622,6.254)
N7: (89.142,98.280,6.944)
N9: (87.880,100.059,7.502)
O5': (91.304,102.195,8.003)
O3': (88.937,102.818,10.941)
OP1: (93.746,92.114,7.479)
OP2: (92.529,94.359,7.212)
C3': (88.868,90.894,7.203)
C1': (87.834,92.294,8.792)
C5': (91.057,91.086,8.509)
O4': (88.924,91.693,9.456)
C8: (88.567,94.616,9.598)
O2': (87.031,92.373,6.524)
C6: (85.567,96.305,10.335)
C5: (86.676,95.500,10.010)
C4: (86.410,94.209,9.591)
P: (92.678,93.059,7.906)
C4': (89.589,90.772,8.544)
C2': (88.197,92.259,7.312)
C2: (84.236,94.483,9.805)
N1: (84.335,95.755,10.219)
N3: (85.200,93.631,9.467)
N6: (85.667,97.574,10.746)
N7: (88.044,95.744,10.014)
N9: (87.634,93.646,9.311)
O5': (91.278,92.314,7.806)
O3': (87.877,89.881,7.081)
Image (generated by PyMOL):
PyMOL image
show in jmol