ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A358:A359

Extra

PDB:
ATOM 1 O3' A A 357 34.886 -81.838 -84.538 1.00 74.39 O
ATOM 2 P A A 358 34.120 -81.956 -85.953 1.00 72.10 P
ATOM 3 OP1 A A 358 33.988 -83.377 -86.406 1.00 70.39 O
ATOM 4 OP2 A A 358 34.715 -80.947 -86.857 1.00 74.31 O
ATOM 5 O5' A A 358 32.698 -81.441 -85.489 1.00 67.43 O
ATOM 6 C5' A A 358 31.667 -81.121 -86.387 1.00 65.50 C
ATOM 7 C4' A A 358 30.526 -80.590 -85.579 1.00 66.76 C
ATOM 8 O4' A A 358 30.319 -81.552 -84.513 1.00 57.39 O
ATOM 9 C3' A A 358 30.814 -79.280 -84.845 1.00 67.07 C
ATOM 10 O3' A A 358 30.463 -78.170 -85.677 1.00 71.39 O
ATOM 11 C2' A A 358 29.896 -79.371 -83.633 1.00 63.00 C
ATOM 12 O2' A A 358 28.582 -78.938 -83.934 1.00 61.19 O
ATOM 13 C1' A A 358 29.909 -80.877 -83.335 1.00 62.91 C
ATOM 14 N9 A A 358 30.802 -81.246 -82.230 1.00 67.41 N
ATOM 15 C8 A A 358 31.810 -82.184 -82.223 1.00 70.16 C
ATOM 16 N7 A A 358 32.481 -82.229 -81.097 1.00 70.49 N
ATOM 17 C5 A A 358 31.867 -81.271 -80.304 1.00 67.31 C
ATOM 18 C6 A A 358 32.127 -80.826 -79.010 1.00 66.45 C
ATOM 19 N6 A A 358 33.141 -81.277 -78.267 1.00 74.15 N
ATOM 20 N1 A A 358 31.321 -79.877 -78.498 1.00 60.31 N
ATOM 21 C2 A A 358 30.338 -79.404 -79.252 1.00 59.93 C
ATOM 22 N3 A A 358 30.002 -79.725 -80.493 1.00 56.85 N
ATOM 23 C4 A A 358 30.817 -80.678 -80.973 1.00 63.79 C
ATOM 24 P A A 359 31.332 -76.810 -85.652 1.00 77.68 P
ATOM 25 OP1 A A 359 30.512 -75.810 -86.383 1.00 82.42 O
ATOM 26 OP2 A A 359 32.736 -77.059 -86.082 1.00 77.91 O
ATOM 27 O5' A A 359 31.360 -76.389 -84.123 1.00 64.37 O
TER

ATOM 1 O3' A B 358 30.463 -78.170 -85.677 1.00 71.39 O
ATOM 2 P A B 359 31.332 -76.810 -85.652 1.00 77.68 P
ATOM 3 OP1 A B 359 30.512 -75.810 -86.383 1.00 82.42 O
ATOM 4 OP2 A B 359 32.736 -77.059 -86.082 1.00 77.91 O
ATOM 5 O5' A B 359 31.360 -76.389 -84.123 1.00 64.37 O
ATOM 6 C5' A B 359 30.232 -75.798 -83.516 1.00 59.26 C
ATOM 7 C4' A B 359 30.560 -75.429 -82.097 1.00 59.69 C
ATOM 8 O4' A B 359 30.782 -76.648 -81.354 1.00 64.05 O
ATOM 9 C3' A B 359 31.821 -74.601 -81.893 1.00 61.38 C
ATOM 10 O3' A B 359 31.545 -73.197 -81.997 1.00 67.56 O
ATOM 11 C2' A B 359 32.241 -74.984 -80.478 1.00 63.12 C
ATOM 12 O2' A B 359 31.525 -74.262 -79.501 1.00 66.26 O
ATOM 13 C1' A B 359 31.793 -76.442 -80.392 1.00 64.32 C
ATOM 14 N9 A B 359 32.864 -77.409 -80.626 1.00 67.80 N
ATOM 15 C8 A B 359 33.083 -78.205 -81.724 1.00 69.12 C
ATOM 16 N7 A B 359 34.129 -78.985 -81.610 1.00 74.93 N
ATOM 17 C5 A B 359 34.637 -78.677 -80.356 1.00 76.01 C
ATOM 18 C6 A B 359 35.752 -79.160 -79.638 1.00 74.57 C
ATOM 19 N6 A B 359 36.590 -80.085 -80.096 1.00 69.73 N
ATOM 20 N1 A B 359 35.976 -78.645 -78.413 1.00 74.91 N
ATOM 21 C2 A B 359 35.138 -77.704 -77.949 1.00 76.07 C
ATOM 22 N3 A B 359 34.064 -77.168 -78.528 1.00 71.32 N
ATOM 23 C4 A B 359 33.867 -77.706 -79.742 1.00 72.51 C
ATOM 24 P G B 360 32.675 -72.179 -82.542 1.00 67.97 P
ATOM 25 OP1 G B 360 32.075 -70.844 -82.807 1.00 61.92 O
ATOM 26 OP2 G B 360 33.407 -72.890 -83.630 1.00 68.28 O
ATOM 27 O5' G B 360 33.651 -72.005 -81.300 1.00 70.65 O
TER

Atoms:
OP1: (33.988,-83.377,-86.406)
OP2: (34.715,-80.947,-86.857)
C3': (30.814,-79.280,-84.845)
C1': (29.909,-80.877,-83.335)
C5': (31.667,-81.121,-86.387)
O4': (30.319,-81.552,-84.513)
C8: (31.810,-82.184,-82.223)
O2': (28.582,-78.938,-83.934)
C6: (32.127,-80.826,-79.010)
C5: (31.867,-81.271,-80.304)
C4: (30.817,-80.678,-80.973)
P: (34.120,-81.956,-85.953)
C4': (30.526,-80.590,-85.579)
C2': (29.896,-79.371,-83.633)
C2: (30.338,-79.404,-79.252)
N1: (31.321,-79.877,-78.498)
N3: (30.002,-79.725,-80.493)
N6: (33.141,-81.277,-78.267)
N7: (32.481,-82.229,-81.097)
N9: (30.802,-81.246,-82.230)
O5': (32.698,-81.441,-85.489)
O3': (30.463,-78.170,-85.677)
OP1: (30.512,-75.810,-86.383)
OP2: (32.736,-77.059,-86.082)
C3': (31.821,-74.601,-81.893)
C1': (31.793,-76.442,-80.392)
C5': (30.232,-75.798,-83.516)
O4': (30.782,-76.648,-81.354)
C8: (33.083,-78.205,-81.724)
O2': (31.525,-74.262,-79.501)
C6: (35.752,-79.160,-79.638)
C5: (34.637,-78.677,-80.356)
C4: (33.867,-77.706,-79.742)
P: (31.332,-76.810,-85.652)
C4': (30.560,-75.429,-82.097)
C2': (32.241,-74.984,-80.478)
C2: (35.138,-77.704,-77.949)
N1: (35.976,-78.645,-78.413)
N3: (34.064,-77.168,-78.528)
N6: (36.590,-80.085,-80.096)
N7: (34.129,-78.985,-81.610)
N9: (32.864,-77.409,-80.626)
O5': (31.360,-76.389,-84.123)
O3': (31.545,-73.197,-81.997)
Image (generated by PyMOL):
PyMOL image
show in jmol