Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01040:01041
Extra
PDB:
ATOM 1 O3' C A1039 37.089 106.237 103.341 1.00 56.59 O
ATOM 2 P A A1040 37.742 106.957 102.067 1.00 57.53 P
ATOM 3 OP1 A A1040 39.004 107.620 102.482 1.00 57.28 O
ATOM 4 OP2 A A1040 36.682 107.744 101.390 1.00 57.31 O
ATOM 5 O5' A A1040 38.143 105.719 101.149 1.00 51.23 O
ATOM 6 C5' A A1040 38.416 104.434 101.736 1.00 41.26 C
ATOM 7 C4' A A1040 38.424 103.376 100.674 1.00 38.37 C
ATOM 8 O4' A A1040 39.489 103.651 99.739 1.00 35.80 O
ATOM 9 C3' A A1040 38.705 101.970 101.154 1.00 39.08 C
ATOM 10 O3' A A1040 37.491 101.374 101.607 1.00 42.24 O
ATOM 11 C2' A A1040 39.203 101.296 99.881 1.00 39.28 C
ATOM 12 O2' A A1040 38.151 100.903 99.024 1.00 42.42 O
ATOM 13 C1' A A1040 39.973 102.437 99.208 1.00 36.72 C
ATOM 14 N9 A A1040 41.426 102.406 99.379 1.00 35.24 N
ATOM 15 C8 A A1040 42.167 102.987 100.378 1.00 34.00 C
ATOM 16 N7 A A1040 43.455 102.820 100.242 1.00 34.28 N
ATOM 17 C5 A A1040 43.574 102.070 99.083 1.00 34.23 C
ATOM 18 C6 A A1040 44.688 101.553 98.404 1.00 34.89 C
ATOM 19 N6 A A1040 45.943 101.735 98.808 1.00 31.82 N
ATOM 20 N1 A A1040 44.463 100.829 97.281 1.00 36.15 N
ATOM 21 C2 A A1040 43.202 100.649 96.881 1.00 32.62 C
ATOM 22 N3 A A1040 42.075 101.090 97.435 1.00 33.28 N
ATOM 23 C4 A A1040 42.333 101.800 98.545 1.00 33.34 C
ATOM 24 P A A1041 37.260 101.073 103.174 1.00 39.64 P
ATOM 25 OP1 A A1041 35.819 101.350 103.417 1.00 40.46 O
ATOM 26 OP2 A A1041 38.284 101.762 103.999 1.00 40.88 O
ATOM 27 O5' A A1041 37.499 99.504 103.278 1.00 39.43 O
TER
ATOM 1 O3' A B1040 37.491 101.374 101.607 1.00 42.24 O
ATOM 2 P A B1041 37.260 101.073 103.174 1.00 39.64 P
ATOM 3 OP1 A B1041 35.819 101.350 103.417 1.00 40.46 O
ATOM 4 OP2 A B1041 38.284 101.762 103.999 1.00 40.88 O
ATOM 5 O5' A B1041 37.499 99.504 103.278 1.00 39.43 O
ATOM 6 C5' A B1041 36.682 98.591 102.530 1.00 39.32 C
ATOM 7 C4' A B1041 37.542 97.553 101.850 1.00 40.36 C
ATOM 8 O4' A B1041 38.471 98.216 100.958 1.00 41.07 O
ATOM 9 C3' A B1041 38.429 96.700 102.745 1.00 40.57 C
ATOM 10 O3' A B1041 37.683 95.612 103.311 1.00 44.84 O
ATOM 11 C2' A B1041 39.505 96.233 101.770 1.00 40.01 C
ATOM 12 O2' A B1041 39.109 95.146 100.965 1.00 40.05 O
ATOM 13 C1' A B1041 39.672 97.465 100.881 1.00 41.05 C
ATOM 14 N9 A B1041 40.794 98.313 101.286 1.00 42.20 N
ATOM 15 C8 A B1041 40.889 99.139 102.379 1.00 43.58 C
ATOM 16 N7 A B1041 42.050 99.734 102.492 1.00 43.97 N
ATOM 17 C5 A B1041 42.765 99.279 101.394 1.00 41.64 C
ATOM 18 C6 A B1041 44.066 99.531 100.947 1.00 39.84 C
ATOM 19 N6 A B1041 44.918 100.345 101.570 1.00 37.49 N
ATOM 20 N1 A B1041 44.470 98.914 99.820 1.00 38.89 N
ATOM 21 C2 A B1041 43.618 98.104 99.191 1.00 38.81 C
ATOM 22 N3 A B1041 42.372 97.788 99.507 1.00 40.98 N
ATOM 23 C4 A B1041 42.000 98.414 100.636 1.00 41.74 C
ATOM 24 P C B1042 38.389 94.577 104.333 1.00 45.80 P
ATOM 25 OP1 C B1042 39.863 94.643 104.207 1.00 45.29 O
ATOM 26 OP2 C B1042 37.712 93.280 104.126 1.00 48.46 O
ATOM 27 O5' C B1042 37.991 95.110 105.782 1.00 44.27 O
TER
ATOM 2 P A A1040 37.742 106.957 102.067 1.00 57.53 P
ATOM 3 OP1 A A1040 39.004 107.620 102.482 1.00 57.28 O
ATOM 4 OP2 A A1040 36.682 107.744 101.390 1.00 57.31 O
ATOM 5 O5' A A1040 38.143 105.719 101.149 1.00 51.23 O
ATOM 6 C5' A A1040 38.416 104.434 101.736 1.00 41.26 C
ATOM 7 C4' A A1040 38.424 103.376 100.674 1.00 38.37 C
ATOM 8 O4' A A1040 39.489 103.651 99.739 1.00 35.80 O
ATOM 9 C3' A A1040 38.705 101.970 101.154 1.00 39.08 C
ATOM 10 O3' A A1040 37.491 101.374 101.607 1.00 42.24 O
ATOM 11 C2' A A1040 39.203 101.296 99.881 1.00 39.28 C
ATOM 12 O2' A A1040 38.151 100.903 99.024 1.00 42.42 O
ATOM 13 C1' A A1040 39.973 102.437 99.208 1.00 36.72 C
ATOM 14 N9 A A1040 41.426 102.406 99.379 1.00 35.24 N
ATOM 15 C8 A A1040 42.167 102.987 100.378 1.00 34.00 C
ATOM 16 N7 A A1040 43.455 102.820 100.242 1.00 34.28 N
ATOM 17 C5 A A1040 43.574 102.070 99.083 1.00 34.23 C
ATOM 18 C6 A A1040 44.688 101.553 98.404 1.00 34.89 C
ATOM 19 N6 A A1040 45.943 101.735 98.808 1.00 31.82 N
ATOM 20 N1 A A1040 44.463 100.829 97.281 1.00 36.15 N
ATOM 21 C2 A A1040 43.202 100.649 96.881 1.00 32.62 C
ATOM 22 N3 A A1040 42.075 101.090 97.435 1.00 33.28 N
ATOM 23 C4 A A1040 42.333 101.800 98.545 1.00 33.34 C
ATOM 24 P A A1041 37.260 101.073 103.174 1.00 39.64 P
ATOM 25 OP1 A A1041 35.819 101.350 103.417 1.00 40.46 O
ATOM 26 OP2 A A1041 38.284 101.762 103.999 1.00 40.88 O
ATOM 27 O5' A A1041 37.499 99.504 103.278 1.00 39.43 O
TER
ATOM 1 O3' A B1040 37.491 101.374 101.607 1.00 42.24 O
ATOM 2 P A B1041 37.260 101.073 103.174 1.00 39.64 P
ATOM 3 OP1 A B1041 35.819 101.350 103.417 1.00 40.46 O
ATOM 4 OP2 A B1041 38.284 101.762 103.999 1.00 40.88 O
ATOM 5 O5' A B1041 37.499 99.504 103.278 1.00 39.43 O
ATOM 6 C5' A B1041 36.682 98.591 102.530 1.00 39.32 C
ATOM 7 C4' A B1041 37.542 97.553 101.850 1.00 40.36 C
ATOM 8 O4' A B1041 38.471 98.216 100.958 1.00 41.07 O
ATOM 9 C3' A B1041 38.429 96.700 102.745 1.00 40.57 C
ATOM 10 O3' A B1041 37.683 95.612 103.311 1.00 44.84 O
ATOM 11 C2' A B1041 39.505 96.233 101.770 1.00 40.01 C
ATOM 12 O2' A B1041 39.109 95.146 100.965 1.00 40.05 O
ATOM 13 C1' A B1041 39.672 97.465 100.881 1.00 41.05 C
ATOM 14 N9 A B1041 40.794 98.313 101.286 1.00 42.20 N
ATOM 15 C8 A B1041 40.889 99.139 102.379 1.00 43.58 C
ATOM 16 N7 A B1041 42.050 99.734 102.492 1.00 43.97 N
ATOM 17 C5 A B1041 42.765 99.279 101.394 1.00 41.64 C
ATOM 18 C6 A B1041 44.066 99.531 100.947 1.00 39.84 C
ATOM 19 N6 A B1041 44.918 100.345 101.570 1.00 37.49 N
ATOM 20 N1 A B1041 44.470 98.914 99.820 1.00 38.89 N
ATOM 21 C2 A B1041 43.618 98.104 99.191 1.00 38.81 C
ATOM 22 N3 A B1041 42.372 97.788 99.507 1.00 40.98 N
ATOM 23 C4 A B1041 42.000 98.414 100.636 1.00 41.74 C
ATOM 24 P C B1042 38.389 94.577 104.333 1.00 45.80 P
ATOM 25 OP1 C B1042 39.863 94.643 104.207 1.00 45.29 O
ATOM 26 OP2 C B1042 37.712 93.280 104.126 1.00 48.46 O
ATOM 27 O5' C B1042 37.991 95.110 105.782 1.00 44.27 O
TER
Atoms:
OP1: (39.004,107.620,102.482)
OP2: (36.682,107.744,101.390)
C3': (38.705,101.970,101.154)
C1': (39.973,102.437,99.208)
C5': (38.416,104.434,101.736)
O4': (39.489,103.651,99.739)
C8: (42.167,102.987,100.378)
O2': (38.151,100.903,99.024)
C6: (44.688,101.553,98.404)
C5: (43.574,102.070,99.083)
C4: (42.333,101.800,98.545)
P: (37.742,106.957,102.067)
C4': (38.424,103.376,100.674)
C2': (39.203,101.296,99.881)
C2: (43.202,100.649,96.881)
N1: (44.463,100.829,97.281)
N3: (42.075,101.090,97.435)
N6: (45.943,101.735,98.808)
N7: (43.455,102.820,100.242)
N9: (41.426,102.406,99.379)
O5': (38.143,105.719,101.149)
O3': (37.491,101.374,101.607)
OP2: (36.682,107.744,101.390)
C3': (38.705,101.970,101.154)
C1': (39.973,102.437,99.208)
C5': (38.416,104.434,101.736)
O4': (39.489,103.651,99.739)
C8: (42.167,102.987,100.378)
O2': (38.151,100.903,99.024)
C6: (44.688,101.553,98.404)
C5: (43.574,102.070,99.083)
C4: (42.333,101.800,98.545)
P: (37.742,106.957,102.067)
C4': (38.424,103.376,100.674)
C2': (39.203,101.296,99.881)
C2: (43.202,100.649,96.881)
N1: (44.463,100.829,97.281)
N3: (42.075,101.090,97.435)
N6: (45.943,101.735,98.808)
N7: (43.455,102.820,100.242)
N9: (41.426,102.406,99.379)
O5': (38.143,105.719,101.149)
O3': (37.491,101.374,101.607)
OP1: (35.819,101.350,103.417)
OP2: (38.284,101.762,103.999)
C3': (38.429,96.700,102.745)
C1': (39.672,97.465,100.881)
C5': (36.682,98.591,102.530)
O4': (38.471,98.216,100.958)
C8: (40.889,99.139,102.379)
O2': (39.109,95.146,100.965)
C6: (44.066,99.531,100.947)
C5: (42.765,99.279,101.394)
C4: (42.000,98.414,100.636)
P: (37.260,101.073,103.174)
C4': (37.542,97.553,101.850)
C2': (39.505,96.233,101.770)
C2: (43.618,98.104,99.191)
N1: (44.470,98.914,99.820)
N3: (42.372,97.788,99.507)
N6: (44.918,100.345,101.570)
N7: (42.050,99.734,102.492)
N9: (40.794,98.313,101.286)
O5': (37.499,99.504,103.278)
O3': (37.683,95.612,103.311)
OP2: (38.284,101.762,103.999)
C3': (38.429,96.700,102.745)
C1': (39.672,97.465,100.881)
C5': (36.682,98.591,102.530)
O4': (38.471,98.216,100.958)
C8: (40.889,99.139,102.379)
O2': (39.109,95.146,100.965)
C6: (44.066,99.531,100.947)
C5: (42.765,99.279,101.394)
C4: (42.000,98.414,100.636)
P: (37.260,101.073,103.174)
C4': (37.542,97.553,101.850)
C2': (39.505,96.233,101.770)
C2: (43.618,98.104,99.191)
N1: (44.470,98.914,99.820)
N3: (42.372,97.788,99.507)
N6: (44.918,100.345,101.570)
N7: (42.050,99.734,102.492)
N9: (40.794,98.313,101.286)
O5': (37.499,99.504,103.278)
O3': (37.683,95.612,103.311)
Image (generated by PyMOL):