Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R1S:B7:B8
Extra
PDB:
ATOM 1 O3' G A 6 -4.005 -6.375 12.441 1.00 11.90 O
ATOM 2 P A A 7 -2.749 -5.397 12.626 1.00 12.98 P
ATOM 3 OP1 A A 7 -2.335 -5.490 14.050 1.00 14.25 O
ATOM 4 OP2 A A 7 -3.070 -4.073 12.036 1.00 12.76 O
ATOM 5 O5' A A 7 -1.618 -6.065 11.728 1.00 11.46 O
ATOM 6 C5' A A 7 -1.136 -7.369 12.017 1.00 10.19 C
ATOM 7 C4' A A 7 -0.108 -7.778 10.992 1.00 8.29 C
ATOM 8 O4' A A 7 -0.745 -7.941 9.694 1.00 8.42 O
ATOM 9 C3' A A 7 0.978 -6.753 10.724 1.00 8.18 C
ATOM 10 O3' A A 7 1.992 -6.793 11.719 1.00 7.67 O
ATOM 11 C2' A A 7 1.475 -7.191 9.355 1.00 7.96 C
ATOM 12 O2' A A 7 2.287 -8.348 9.421 1.00 7.73 O
ATOM 13 C1' A A 7 0.151 -7.532 8.669 1.00 7.52 C
ATOM 14 N9 A A 7 -0.423 -6.368 7.992 1.00 7.02 N
ATOM 15 C8 A A 7 -1.522 -5.630 8.357 1.00 7.25 C
ATOM 16 N7 A A 7 -1.777 -4.628 7.550 1.00 7.82 N
ATOM 17 C5 A A 7 -0.782 -4.713 6.587 1.00 6.32 C
ATOM 18 C6 A A 7 -0.494 -3.936 5.449 1.00 6.28 C
ATOM 19 N6 A A 7 -1.217 -2.878 5.070 1.00 7.76 N
ATOM 20 N1 A A 7 0.577 -4.289 4.702 1.00 7.64 N
ATOM 21 C2 A A 7 1.299 -5.353 5.079 1.00 6.59 C
ATOM 22 N3 A A 7 1.127 -6.162 6.122 1.00 6.99 N
ATOM 23 C4 A A 7 0.058 -5.782 6.845 1.00 6.75 C
ATOM 24 P A A 8 2.669 -5.424 12.211 1.00 8.71 P
ATOM 25 OP1 A A 8 3.617 -5.775 13.299 1.00 10.74 O
ATOM 26 OP2 A A 8 1.606 -4.418 12.460 1.00 10.17 O
ATOM 27 O5' A A 8 3.501 -4.943 10.944 1.00 9.12 O
TER
ATOM 1 O3' A B 7 1.992 -6.793 11.719 1.00 7.67 O
ATOM 2 P A B 8 2.669 -5.424 12.211 1.00 8.71 P
ATOM 3 OP1 A B 8 3.617 -5.775 13.299 1.00 10.74 O
ATOM 4 OP2 A B 8 1.606 -4.418 12.460 1.00 10.17 O
ATOM 5 O5' A B 8 3.501 -4.943 10.944 1.00 9.12 O
ATOM 6 C5' A B 8 4.559 -5.737 10.434 1.00 8.31 C
ATOM 7 C4' A B 8 5.140 -5.099 9.201 1.00 8.18 C
ATOM 8 O4' A B 8 4.161 -5.119 8.128 1.00 8.25 O
ATOM 9 C3' A B 8 5.476 -3.625 9.318 1.00 7.07 C
ATOM 10 O3' A B 8 6.696 -3.415 10.010 1.00 8.04 O
ATOM 11 C2' A B 8 5.564 -3.226 7.853 1.00 7.39 C
ATOM 12 O2' A B 8 6.765 -3.665 7.252 1.00 7.81 O
ATOM 13 C1' A B 8 4.384 -4.008 7.271 1.00 6.90 C
ATOM 14 N9 A B 8 3.173 -3.192 7.231 1.00 7.39 N
ATOM 15 C8 A B 8 2.085 -3.206 8.069 1.00 6.95 C
ATOM 16 N7 A B 8 1.173 -2.313 7.763 1.00 6.86 N
ATOM 17 C5 A B 8 1.696 -1.673 6.646 1.00 6.74 C
ATOM 18 C6 A B 8 1.215 -0.624 5.839 1.00 6.48 C
ATOM 19 N6 A B 8 0.048 -0.007 6.039 1.00 7.41 N
ATOM 20 N1 A B 8 1.986 -0.227 4.802 1.00 6.33 N
ATOM 21 C2 A B 8 3.155 -0.844 4.598 1.00 6.77 C
ATOM 22 N3 A B 8 3.713 -1.838 5.284 1.00 6.79 N
ATOM 23 C4 A B 8 2.923 -2.209 6.307 1.00 6.94 C
ATOM 24 P A B 9 6.943 -2.019 10.764 1.00 8.01 P
ATOM 25 OP1 A B 9 8.061 -2.227 11.724 1.00 8.56 O
ATOM 26 OP2 A B 9 5.642 -1.489 11.251 1.00 9.28 O
ATOM 27 O5' A B 9 7.467 -1.061 9.606 1.00 7.42 O
TER
ATOM 2 P A A 7 -2.749 -5.397 12.626 1.00 12.98 P
ATOM 3 OP1 A A 7 -2.335 -5.490 14.050 1.00 14.25 O
ATOM 4 OP2 A A 7 -3.070 -4.073 12.036 1.00 12.76 O
ATOM 5 O5' A A 7 -1.618 -6.065 11.728 1.00 11.46 O
ATOM 6 C5' A A 7 -1.136 -7.369 12.017 1.00 10.19 C
ATOM 7 C4' A A 7 -0.108 -7.778 10.992 1.00 8.29 C
ATOM 8 O4' A A 7 -0.745 -7.941 9.694 1.00 8.42 O
ATOM 9 C3' A A 7 0.978 -6.753 10.724 1.00 8.18 C
ATOM 10 O3' A A 7 1.992 -6.793 11.719 1.00 7.67 O
ATOM 11 C2' A A 7 1.475 -7.191 9.355 1.00 7.96 C
ATOM 12 O2' A A 7 2.287 -8.348 9.421 1.00 7.73 O
ATOM 13 C1' A A 7 0.151 -7.532 8.669 1.00 7.52 C
ATOM 14 N9 A A 7 -0.423 -6.368 7.992 1.00 7.02 N
ATOM 15 C8 A A 7 -1.522 -5.630 8.357 1.00 7.25 C
ATOM 16 N7 A A 7 -1.777 -4.628 7.550 1.00 7.82 N
ATOM 17 C5 A A 7 -0.782 -4.713 6.587 1.00 6.32 C
ATOM 18 C6 A A 7 -0.494 -3.936 5.449 1.00 6.28 C
ATOM 19 N6 A A 7 -1.217 -2.878 5.070 1.00 7.76 N
ATOM 20 N1 A A 7 0.577 -4.289 4.702 1.00 7.64 N
ATOM 21 C2 A A 7 1.299 -5.353 5.079 1.00 6.59 C
ATOM 22 N3 A A 7 1.127 -6.162 6.122 1.00 6.99 N
ATOM 23 C4 A A 7 0.058 -5.782 6.845 1.00 6.75 C
ATOM 24 P A A 8 2.669 -5.424 12.211 1.00 8.71 P
ATOM 25 OP1 A A 8 3.617 -5.775 13.299 1.00 10.74 O
ATOM 26 OP2 A A 8 1.606 -4.418 12.460 1.00 10.17 O
ATOM 27 O5' A A 8 3.501 -4.943 10.944 1.00 9.12 O
TER
ATOM 1 O3' A B 7 1.992 -6.793 11.719 1.00 7.67 O
ATOM 2 P A B 8 2.669 -5.424 12.211 1.00 8.71 P
ATOM 3 OP1 A B 8 3.617 -5.775 13.299 1.00 10.74 O
ATOM 4 OP2 A B 8 1.606 -4.418 12.460 1.00 10.17 O
ATOM 5 O5' A B 8 3.501 -4.943 10.944 1.00 9.12 O
ATOM 6 C5' A B 8 4.559 -5.737 10.434 1.00 8.31 C
ATOM 7 C4' A B 8 5.140 -5.099 9.201 1.00 8.18 C
ATOM 8 O4' A B 8 4.161 -5.119 8.128 1.00 8.25 O
ATOM 9 C3' A B 8 5.476 -3.625 9.318 1.00 7.07 C
ATOM 10 O3' A B 8 6.696 -3.415 10.010 1.00 8.04 O
ATOM 11 C2' A B 8 5.564 -3.226 7.853 1.00 7.39 C
ATOM 12 O2' A B 8 6.765 -3.665 7.252 1.00 7.81 O
ATOM 13 C1' A B 8 4.384 -4.008 7.271 1.00 6.90 C
ATOM 14 N9 A B 8 3.173 -3.192 7.231 1.00 7.39 N
ATOM 15 C8 A B 8 2.085 -3.206 8.069 1.00 6.95 C
ATOM 16 N7 A B 8 1.173 -2.313 7.763 1.00 6.86 N
ATOM 17 C5 A B 8 1.696 -1.673 6.646 1.00 6.74 C
ATOM 18 C6 A B 8 1.215 -0.624 5.839 1.00 6.48 C
ATOM 19 N6 A B 8 0.048 -0.007 6.039 1.00 7.41 N
ATOM 20 N1 A B 8 1.986 -0.227 4.802 1.00 6.33 N
ATOM 21 C2 A B 8 3.155 -0.844 4.598 1.00 6.77 C
ATOM 22 N3 A B 8 3.713 -1.838 5.284 1.00 6.79 N
ATOM 23 C4 A B 8 2.923 -2.209 6.307 1.00 6.94 C
ATOM 24 P A B 9 6.943 -2.019 10.764 1.00 8.01 P
ATOM 25 OP1 A B 9 8.061 -2.227 11.724 1.00 8.56 O
ATOM 26 OP2 A B 9 5.642 -1.489 11.251 1.00 9.28 O
ATOM 27 O5' A B 9 7.467 -1.061 9.606 1.00 7.42 O
TER
Atoms:
OP1: (-2.335,-5.490,14.050)
OP2: (-3.070,-4.073,12.036)
C3': (0.978,-6.753,10.724)
C1': (0.151,-7.532,8.669)
C5': (-1.136,-7.369,12.017)
O4': (-0.745,-7.941,9.694)
C8: (-1.522,-5.630,8.357)
O2': (2.287,-8.348,9.421)
C6: (-0.494,-3.936,5.449)
C5: (-0.782,-4.713,6.587)
C4: (0.058,-5.782,6.845)
P: (-2.749,-5.397,12.626)
C4': (-0.108,-7.778,10.992)
C2': (1.475,-7.191,9.355)
C2: (1.299,-5.353,5.079)
N1: (0.577,-4.289,4.702)
N3: (1.127,-6.162,6.122)
N6: (-1.217,-2.878,5.070)
N7: (-1.777,-4.628,7.550)
N9: (-0.423,-6.368,7.992)
O5': (-1.618,-6.065,11.728)
O3': (1.992,-6.793,11.719)
OP2: (-3.070,-4.073,12.036)
C3': (0.978,-6.753,10.724)
C1': (0.151,-7.532,8.669)
C5': (-1.136,-7.369,12.017)
O4': (-0.745,-7.941,9.694)
C8: (-1.522,-5.630,8.357)
O2': (2.287,-8.348,9.421)
C6: (-0.494,-3.936,5.449)
C5: (-0.782,-4.713,6.587)
C4: (0.058,-5.782,6.845)
P: (-2.749,-5.397,12.626)
C4': (-0.108,-7.778,10.992)
C2': (1.475,-7.191,9.355)
C2: (1.299,-5.353,5.079)
N1: (0.577,-4.289,4.702)
N3: (1.127,-6.162,6.122)
N6: (-1.217,-2.878,5.070)
N7: (-1.777,-4.628,7.550)
N9: (-0.423,-6.368,7.992)
O5': (-1.618,-6.065,11.728)
O3': (1.992,-6.793,11.719)
OP1: (3.617,-5.775,13.299)
OP2: (1.606,-4.418,12.460)
C3': (5.476,-3.625,9.318)
C1': (4.384,-4.008,7.271)
C5': (4.559,-5.737,10.434)
O4': (4.161,-5.119,8.128)
C8: (2.085,-3.206,8.069)
O2': (6.765,-3.665,7.252)
C6: (1.215,-0.624,5.839)
C5: (1.696,-1.673,6.646)
C4: (2.923,-2.209,6.307)
P: (2.669,-5.424,12.211)
C4': (5.140,-5.099,9.201)
C2': (5.564,-3.226,7.853)
C2: (3.155,-0.844,4.598)
N1: (1.986,-0.227,4.802)
N3: (3.713,-1.838,5.284)
N6: (0.048,-0.007,6.039)
N7: (1.173,-2.313,7.763)
N9: (3.173,-3.192,7.231)
O5': (3.501,-4.943,10.944)
O3': (6.696,-3.415,10.010)
OP2: (1.606,-4.418,12.460)
C3': (5.476,-3.625,9.318)
C1': (4.384,-4.008,7.271)
C5': (4.559,-5.737,10.434)
O4': (4.161,-5.119,8.128)
C8: (2.085,-3.206,8.069)
O2': (6.765,-3.665,7.252)
C6: (1.215,-0.624,5.839)
C5: (1.696,-1.673,6.646)
C4: (2.923,-2.209,6.307)
P: (2.669,-5.424,12.211)
C4': (5.140,-5.099,9.201)
C2': (5.564,-3.226,7.853)
C2: (3.155,-0.844,4.598)
N1: (1.986,-0.227,4.802)
N3: (3.713,-1.838,5.284)
N6: (0.048,-0.007,6.039)
N7: (1.173,-2.313,7.763)
N9: (3.173,-3.192,7.231)
O5': (3.501,-4.943,10.944)
O3': (6.696,-3.415,10.010)
Image (generated by PyMOL):