ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5606:5607

Extra

PDB:
ATOM 1 O3' C A 605 110.597 9.853 219.014 1.00 36.71 O
ATOM 2 P A A 606 110.369 8.353 218.488 1.00 41.32 P
ATOM 3 OP1 A A 606 109.050 7.909 219.001 1.00 41.48 O
ATOM 4 OP2 A A 606 111.575 7.566 218.840 1.00 41.06 O
ATOM 5 O5' A A 606 110.282 8.550 216.916 1.00 41.63 O
ATOM 6 C5' A A 606 109.186 8.070 216.182 1.00 41.99 C
ATOM 7 C4' A A 606 109.410 8.263 214.709 1.00 42.24 C
ATOM 8 O4' A A 606 110.524 9.149 214.495 1.00 42.07 O
ATOM 9 C3' A A 606 109.774 7.019 213.938 1.00 42.36 C
ATOM 10 O3' A A 606 108.650 6.324 213.553 1.00 42.66 O
ATOM 11 C2' A A 606 110.542 7.559 212.765 1.00 42.46 C
ATOM 12 O2' A A 606 109.639 8.099 211.814 1.00 42.82 O
ATOM 13 C1' A A 606 111.283 8.707 213.404 1.00 42.17 C
ATOM 14 N9 A A 606 112.603 8.319 213.900 1.00 41.84 N
ATOM 15 C8 A A 606 112.887 8.293 215.218 1.00 41.52 C
ATOM 16 N7 A A 606 114.117 7.987 215.425 1.00 41.28 N
ATOM 17 C5 A A 606 114.705 7.835 214.170 1.00 41.45 C
ATOM 18 C6 A A 606 116.025 7.531 213.767 1.00 41.33 C
ATOM 19 N6 A A 606 117.027 7.331 214.628 1.00 41.00 N
ATOM 20 N1 A A 606 116.287 7.438 212.469 1.00 41.57 N
ATOM 21 C2 A A 606 115.276 7.681 211.639 1.00 41.91 C
ATOM 22 N3 A A 606 113.997 7.992 211.868 1.00 42.06 N
ATOM 23 C4 A A 606 113.769 8.059 213.199 1.00 41.80 C
ATOM 24 P A A 607 108.406 4.915 214.141 1.00 41.01 P
ATOM 25 OP1 A A 607 106.953 4.626 213.993 1.00 41.33 O
ATOM 26 OP2 A A 607 109.013 4.913 215.477 1.00 40.62 O
ATOM 27 O5' A A 607 109.240 4.008 213.159 1.00 41.09 O
TER

ATOM 1 O3' A B 606 108.650 6.324 213.553 1.00 42.66 O
ATOM 2 P A B 607 108.406 4.915 214.141 1.00 41.01 P
ATOM 3 OP1 A B 607 106.953 4.626 213.993 1.00 41.33 O
ATOM 4 OP2 A B 607 109.013 4.913 215.477 1.00 40.62 O
ATOM 5 O5' A B 607 109.240 4.008 213.159 1.00 41.09 O
ATOM 6 C5' A B 607 108.729 3.726 211.867 1.00 41.48 C
ATOM 7 C4' A B 607 109.811 3.692 210.850 1.00 41.51 C
ATOM 8 O4' A B 607 110.706 4.801 211.068 1.00 41.26 O
ATOM 9 C3' A B 607 110.721 2.516 210.942 1.00 41.38 C
ATOM 10 O3' A B 607 110.151 1.324 210.450 1.00 41.65 O
ATOM 11 C2' A B 607 111.933 3.001 210.185 1.00 41.32 C
ATOM 12 O2' A B 607 111.661 3.045 208.793 1.00 41.70 O
ATOM 13 C1' A B 607 112.013 4.432 210.698 1.00 41.13 C
ATOM 14 N9 A B 607 112.855 4.514 211.871 1.00 40.72 N
ATOM 15 C8 A B 607 112.514 4.810 213.155 1.00 40.49 C
ATOM 16 N7 A B 607 113.533 4.784 213.997 1.00 40.14 N
ATOM 17 C5 A B 607 114.589 4.432 213.195 1.00 40.15 C
ATOM 18 C6 A B 607 115.919 4.201 213.461 1.00 39.89 C
ATOM 19 N6 A B 607 116.464 4.282 214.660 1.00 39.55 N
ATOM 20 N1 A B 607 116.699 3.869 212.429 1.00 40.01 N
ATOM 21 C2 A B 607 116.172 3.772 211.216 1.00 40.37 C
ATOM 22 N3 A B 607 114.913 3.987 210.855 1.00 40.64 N
ATOM 23 C4 A B 607 114.175 4.281 211.897 1.00 40.51 C
ATOM 24 P G B 608 110.182 0.046 211.384 1.00 39.88 P
ATOM 25 OP1 G B 608 109.185 -0.932 210.922 1.00 40.22 O
ATOM 26 OP2 G B 608 110.063 0.559 212.706 1.00 39.57 O
ATOM 27 O5' G B 608 111.648 -0.502 211.142 1.00 39.71 O
TER

Atoms:
OP1: (109.050,7.909,219.001)
OP2: (111.575,7.566,218.840)
C3': (109.774,7.019,213.938)
C1': (111.283,8.707,213.404)
C5': (109.186,8.070,216.182)
O4': (110.524,9.149,214.495)
C8: (112.887,8.293,215.218)
O2': (109.639,8.099,211.814)
C6: (116.025,7.531,213.767)
C5: (114.705,7.835,214.170)
C4: (113.769,8.059,213.199)
P: (110.369,8.353,218.488)
C4': (109.410,8.263,214.709)
C2': (110.542,7.559,212.765)
C2: (115.276,7.681,211.639)
N1: (116.287,7.438,212.469)
N3: (113.997,7.992,211.868)
N6: (117.027,7.331,214.628)
N7: (114.117,7.987,215.425)
N9: (112.603,8.319,213.900)
O5': (110.282,8.550,216.916)
O3': (108.650,6.324,213.553)
OP1: (106.953,4.626,213.993)
OP2: (109.013,4.913,215.477)
C3': (110.721,2.516,210.942)
C1': (112.013,4.432,210.698)
C5': (108.729,3.726,211.867)
O4': (110.706,4.801,211.068)
C8: (112.514,4.810,213.155)
O2': (111.661,3.045,208.793)
C6: (115.919,4.201,213.461)
C5: (114.589,4.432,213.195)
C4: (114.175,4.281,211.897)
P: (108.406,4.915,214.141)
C4': (109.811,3.692,210.850)
C2': (111.933,3.001,210.185)
C2: (116.172,3.772,211.216)
N1: (116.699,3.869,212.429)
N3: (114.913,3.987,210.855)
N6: (116.464,4.282,214.660)
N7: (113.533,4.784,213.997)
N9: (112.855,4.514,211.871)
O5': (109.240,4.008,213.159)
O3': (110.151,1.324,210.450)
Image (generated by PyMOL):
PyMOL image
show in jmol