ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:A126:A127

Extra

PDB:
ATOM 1 O3' C A 125 -41.869 -71.285 112.870 1.00132.81 O
ATOM 2 P A A 126 -42.585 -72.701 113.107 1.00136.88 P
ATOM 3 OP1 A A 126 -43.586 -72.520 114.181 1.00137.43 O
ATOM 4 OP2 A A 126 -41.531 -73.740 113.258 1.00135.52 O
ATOM 5 O5' A A 126 -43.351 -72.965 111.731 1.00140.68 O
ATOM 6 C5' A A 126 -44.354 -72.062 111.268 1.00144.74 C
ATOM 7 C4' A A 126 -44.864 -72.486 109.910 1.00148.07 C
ATOM 8 O4' A A 126 -43.800 -72.337 108.931 1.00148.68 O
ATOM 9 C3' A A 126 -45.288 -73.942 109.787 1.00149.75 C
ATOM 10 O3' A A 126 -46.619 -74.162 110.247 1.00151.75 O
ATOM 11 C2' A A 126 -45.150 -74.185 108.290 1.00150.20 C
ATOM 12 O2' A A 126 -46.249 -73.691 107.547 1.00150.65 O
ATOM 13 C1' A A 126 -43.889 -73.376 107.968 1.00150.00 C
ATOM 14 N9 A A 126 -42.688 -74.205 108.064 1.00150.36 N
ATOM 15 C8 A A 126 -41.769 -74.252 109.083 1.00150.66 C
ATOM 16 N7 A A 126 -40.821 -75.142 108.900 1.00150.85 N
ATOM 17 C5 A A 126 -41.131 -75.712 107.673 1.00151.19 C
ATOM 18 C6 A A 126 -40.516 -76.726 106.919 1.00151.15 C
ATOM 19 N6 A A 126 -39.417 -77.372 107.307 1.00151.48 N
ATOM 20 N1 A A 126 -41.078 -77.059 105.738 1.00151.26 N
ATOM 21 C2 A A 126 -42.184 -76.413 105.351 1.00151.23 C
ATOM 22 N3 A A 126 -42.856 -75.446 105.969 1.00150.99 N
ATOM 23 C4 A A 126 -42.271 -75.138 107.141 1.00150.96 C
ATOM 24 P A A 127 -47.114 -75.662 110.579 1.00153.99 P
ATOM 25 OP1 A A 127 -48.492 -75.584 111.123 1.00154.50 O
ATOM 26 OP2 A A 127 -46.054 -76.343 111.373 1.00153.40 O
ATOM 27 O5' A A 127 -47.189 -76.371 109.149 1.00156.05 O
TER

ATOM 1 O3' A B 126 -46.619 -74.162 110.247 1.00151.75 O
ATOM 2 P A B 127 -47.114 -75.662 110.579 1.00153.99 P
ATOM 3 OP1 A B 127 -48.492 -75.584 111.123 1.00154.50 O
ATOM 4 OP2 A B 127 -46.054 -76.343 111.373 1.00153.40 O
ATOM 5 O5' A B 127 -47.189 -76.371 109.149 1.00156.05 O
ATOM 6 C5' A B 127 -48.168 -75.985 108.177 1.00158.25 C
ATOM 7 C4' A B 127 -48.100 -76.899 106.970 1.00159.89 C
ATOM 8 O4' A B 127 -46.835 -76.701 106.280 1.00160.48 O
ATOM 9 C3' A B 127 -48.146 -78.390 107.267 1.00160.99 C
ATOM 10 O3' A B 127 -49.486 -78.850 107.415 1.00161.98 O
ATOM 11 C2' A B 127 -47.455 -78.982 106.044 1.00160.90 C
ATOM 12 O2' A B 127 -48.311 -79.085 104.925 1.00161.07 O
ATOM 13 C1' A B 127 -46.359 -77.943 105.781 1.00160.84 C
ATOM 14 N9 A B 127 -45.113 -78.258 106.484 1.00161.01 N
ATOM 15 C8 A B 127 -44.690 -77.744 107.684 1.00160.75 C
ATOM 16 N7 A B 127 -43.546 -78.230 108.096 1.00160.75 N
ATOM 17 C5 A B 127 -43.184 -79.120 107.098 1.00160.88 C
ATOM 18 C6 A B 127 -42.069 -79.962 106.943 1.00160.91 C
ATOM 19 N6 A B 127 -41.079 -80.049 107.831 1.00161.13 N
ATOM 20 N1 A B 127 -42.006 -80.723 105.831 1.00160.76 N
ATOM 21 C2 A B 127 -43.001 -80.639 104.943 1.00161.10 C
ATOM 22 N3 A B 127 -44.103 -79.889 104.977 1.00161.46 N
ATOM 23 C4 A B 127 -44.135 -79.144 106.094 1.00161.12 C
ATOM 24 P C B 128 -49.821 -79.989 108.498 1.00162.67 P
ATOM 25 OP1 C B 128 -51.294 -80.126 108.596 1.00163.72 O
ATOM 26 OP2 C B 128 -49.028 -79.702 109.720 1.00162.48 O
ATOM 27 O5' C B 128 -49.241 -81.322 107.847 1.00163.30 O
TER

Atoms:
OP1: (-43.586,-72.520,114.181)
OP2: (-41.531,-73.740,113.258)
C3': (-45.288,-73.942,109.787)
C1': (-43.889,-73.376,107.968)
C5': (-44.354,-72.062,111.268)
O4': (-43.800,-72.337,108.931)
C8: (-41.769,-74.252,109.083)
O2': (-46.249,-73.691,107.547)
C6: (-40.516,-76.726,106.919)
C5: (-41.131,-75.712,107.673)
C4: (-42.271,-75.138,107.141)
P: (-42.585,-72.701,113.107)
C4': (-44.864,-72.486,109.910)
C2': (-45.150,-74.185,108.290)
C2: (-42.184,-76.413,105.351)
N1: (-41.078,-77.059,105.738)
N3: (-42.856,-75.446,105.969)
N6: (-39.417,-77.372,107.307)
N7: (-40.821,-75.142,108.900)
N9: (-42.688,-74.205,108.064)
O5': (-43.351,-72.965,111.731)
O3': (-46.619,-74.162,110.247)
OP1: (-48.492,-75.584,111.123)
OP2: (-46.054,-76.343,111.373)
C3': (-48.146,-78.390,107.267)
C1': (-46.359,-77.943,105.781)
C5': (-48.168,-75.985,108.177)
O4': (-46.835,-76.701,106.280)
C8: (-44.690,-77.744,107.684)
O2': (-48.311,-79.085,104.925)
C6: (-42.069,-79.962,106.943)
C5: (-43.184,-79.120,107.098)
C4: (-44.135,-79.144,106.094)
P: (-47.114,-75.662,110.579)
C4': (-48.100,-76.899,106.970)
C2': (-47.455,-78.982,106.044)
C2: (-43.001,-80.639,104.943)
N1: (-42.006,-80.723,105.831)
N3: (-44.103,-79.889,104.977)
N6: (-41.079,-80.049,107.831)
N7: (-43.546,-78.230,108.096)
N9: (-45.113,-78.258,106.484)
O5': (-47.189,-76.371,109.149)
O3': (-49.486,-78.850,107.415)
Image (generated by PyMOL):
PyMOL image
show in jmol