Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0424:0425
Extra
PDB:
ATOM 1 O3' A A 423 60.826 117.433 16.570 1.00 46.19 O
ATOM 2 P A A 424 59.957 117.329 17.912 1.00 46.84 P
ATOM 3 OP1 A A 424 59.083 118.528 17.964 1.00 48.20 O
ATOM 4 OP2 A A 424 60.881 117.047 19.037 1.00 47.61 O
ATOM 5 O5' A A 424 59.037 116.052 17.669 1.00 46.65 O
ATOM 6 C5' A A 424 57.815 116.146 16.919 1.00 44.21 C
ATOM 7 C4' A A 424 57.002 114.893 17.113 1.00 44.50 C
ATOM 8 O4' A A 424 57.713 113.772 16.534 1.00 44.19 O
ATOM 9 C3' A A 424 56.790 114.515 18.568 1.00 44.16 C
ATOM 10 O3' A A 424 55.652 115.196 19.083 1.00 45.94 O
ATOM 11 C2' A A 424 56.616 113.002 18.504 1.00 42.94 C
ATOM 12 O2' A A 424 55.304 112.631 18.130 1.00 40.41 O
ATOM 13 C1' A A 424 57.577 112.636 17.367 1.00 42.21 C
ATOM 14 N9 A A 424 58.924 112.218 17.751 1.00 40.82 N
ATOM 15 C8 A A 424 59.999 113.016 18.050 1.00 40.78 C
ATOM 16 N7 A A 424 61.107 112.351 18.270 1.00 41.48 N
ATOM 17 C5 A A 424 60.732 111.023 18.123 1.00 41.12 C
ATOM 18 C6 A A 424 61.454 109.815 18.219 1.00 41.31 C
ATOM 19 N6 A A 424 62.761 109.746 18.482 1.00 41.51 N
ATOM 20 N1 A A 424 60.777 108.664 18.027 1.00 40.58 N
ATOM 21 C2 A A 424 59.466 108.730 17.759 1.00 41.42 C
ATOM 22 N3 A A 424 58.680 109.799 17.638 1.00 40.54 N
ATOM 23 C4 A A 424 59.383 110.927 17.829 1.00 41.19 C
ATOM 24 P A A 425 55.555 115.509 20.652 1.00 48.90 P
ATOM 25 OP1 A A 425 54.380 116.388 20.865 1.00 48.12 O
ATOM 26 OP2 A A 425 56.889 115.934 21.144 1.00 49.56 O
ATOM 27 O5' A A 425 55.235 114.088 21.294 1.00 49.95 O
TER
ATOM 1 O3' A B 424 55.652 115.196 19.083 1.00 45.94 O
ATOM 2 P A B 425 55.555 115.509 20.652 1.00 48.90 P
ATOM 3 OP1 A B 425 54.380 116.388 20.865 1.00 48.12 O
ATOM 4 OP2 A B 425 56.889 115.934 21.144 1.00 49.56 O
ATOM 5 O5' A B 425 55.235 114.088 21.294 1.00 49.95 O
ATOM 6 C5' A B 425 53.970 113.437 21.063 1.00 47.68 C
ATOM 7 C4' A B 425 53.965 112.084 21.724 1.00 46.21 C
ATOM 8 O4' A B 425 54.858 111.188 21.026 1.00 46.15 O
ATOM 9 C3' A B 425 54.475 112.097 23.147 1.00 45.05 C
ATOM 10 O3' A B 425 53.409 112.461 24.010 1.00 47.55 O
ATOM 11 C2' A B 425 54.945 110.663 23.342 1.00 45.46 C
ATOM 12 O2' A B 425 53.900 109.764 23.636 1.00 47.07 O
ATOM 13 C1' A B 425 55.491 110.331 21.952 1.00 44.94 C
ATOM 14 N9 A B 425 56.933 110.502 21.815 1.00 44.82 N
ATOM 15 C8 A B 425 57.659 111.664 21.876 1.00 44.94 C
ATOM 16 N7 A B 425 58.950 111.486 21.741 1.00 46.31 N
ATOM 17 C5 A B 425 59.083 110.114 21.575 1.00 45.20 C
ATOM 18 C6 A B 425 60.208 109.282 21.396 1.00 45.49 C
ATOM 19 N6 A B 425 61.463 109.733 21.363 1.00 43.91 N
ATOM 20 N1 A B 425 59.994 107.955 21.256 1.00 45.93 N
ATOM 21 C2 A B 425 58.734 107.505 21.296 1.00 46.66 C
ATOM 22 N3 A B 425 57.598 108.184 21.467 1.00 45.67 N
ATOM 23 C4 A B 425 57.846 109.498 21.605 1.00 44.98 C
ATOM 24 P C B 426 53.597 113.665 25.053 1.00 47.32 P
ATOM 25 OP1 C B 426 52.272 113.952 25.672 1.00 44.55 O
ATOM 26 OP2 C B 426 54.340 114.757 24.375 1.00 47.79 O
ATOM 27 O5' C B 426 54.562 113.030 26.145 1.00 46.38 O
TER
ATOM 2 P A A 424 59.957 117.329 17.912 1.00 46.84 P
ATOM 3 OP1 A A 424 59.083 118.528 17.964 1.00 48.20 O
ATOM 4 OP2 A A 424 60.881 117.047 19.037 1.00 47.61 O
ATOM 5 O5' A A 424 59.037 116.052 17.669 1.00 46.65 O
ATOM 6 C5' A A 424 57.815 116.146 16.919 1.00 44.21 C
ATOM 7 C4' A A 424 57.002 114.893 17.113 1.00 44.50 C
ATOM 8 O4' A A 424 57.713 113.772 16.534 1.00 44.19 O
ATOM 9 C3' A A 424 56.790 114.515 18.568 1.00 44.16 C
ATOM 10 O3' A A 424 55.652 115.196 19.083 1.00 45.94 O
ATOM 11 C2' A A 424 56.616 113.002 18.504 1.00 42.94 C
ATOM 12 O2' A A 424 55.304 112.631 18.130 1.00 40.41 O
ATOM 13 C1' A A 424 57.577 112.636 17.367 1.00 42.21 C
ATOM 14 N9 A A 424 58.924 112.218 17.751 1.00 40.82 N
ATOM 15 C8 A A 424 59.999 113.016 18.050 1.00 40.78 C
ATOM 16 N7 A A 424 61.107 112.351 18.270 1.00 41.48 N
ATOM 17 C5 A A 424 60.732 111.023 18.123 1.00 41.12 C
ATOM 18 C6 A A 424 61.454 109.815 18.219 1.00 41.31 C
ATOM 19 N6 A A 424 62.761 109.746 18.482 1.00 41.51 N
ATOM 20 N1 A A 424 60.777 108.664 18.027 1.00 40.58 N
ATOM 21 C2 A A 424 59.466 108.730 17.759 1.00 41.42 C
ATOM 22 N3 A A 424 58.680 109.799 17.638 1.00 40.54 N
ATOM 23 C4 A A 424 59.383 110.927 17.829 1.00 41.19 C
ATOM 24 P A A 425 55.555 115.509 20.652 1.00 48.90 P
ATOM 25 OP1 A A 425 54.380 116.388 20.865 1.00 48.12 O
ATOM 26 OP2 A A 425 56.889 115.934 21.144 1.00 49.56 O
ATOM 27 O5' A A 425 55.235 114.088 21.294 1.00 49.95 O
TER
ATOM 1 O3' A B 424 55.652 115.196 19.083 1.00 45.94 O
ATOM 2 P A B 425 55.555 115.509 20.652 1.00 48.90 P
ATOM 3 OP1 A B 425 54.380 116.388 20.865 1.00 48.12 O
ATOM 4 OP2 A B 425 56.889 115.934 21.144 1.00 49.56 O
ATOM 5 O5' A B 425 55.235 114.088 21.294 1.00 49.95 O
ATOM 6 C5' A B 425 53.970 113.437 21.063 1.00 47.68 C
ATOM 7 C4' A B 425 53.965 112.084 21.724 1.00 46.21 C
ATOM 8 O4' A B 425 54.858 111.188 21.026 1.00 46.15 O
ATOM 9 C3' A B 425 54.475 112.097 23.147 1.00 45.05 C
ATOM 10 O3' A B 425 53.409 112.461 24.010 1.00 47.55 O
ATOM 11 C2' A B 425 54.945 110.663 23.342 1.00 45.46 C
ATOM 12 O2' A B 425 53.900 109.764 23.636 1.00 47.07 O
ATOM 13 C1' A B 425 55.491 110.331 21.952 1.00 44.94 C
ATOM 14 N9 A B 425 56.933 110.502 21.815 1.00 44.82 N
ATOM 15 C8 A B 425 57.659 111.664 21.876 1.00 44.94 C
ATOM 16 N7 A B 425 58.950 111.486 21.741 1.00 46.31 N
ATOM 17 C5 A B 425 59.083 110.114 21.575 1.00 45.20 C
ATOM 18 C6 A B 425 60.208 109.282 21.396 1.00 45.49 C
ATOM 19 N6 A B 425 61.463 109.733 21.363 1.00 43.91 N
ATOM 20 N1 A B 425 59.994 107.955 21.256 1.00 45.93 N
ATOM 21 C2 A B 425 58.734 107.505 21.296 1.00 46.66 C
ATOM 22 N3 A B 425 57.598 108.184 21.467 1.00 45.67 N
ATOM 23 C4 A B 425 57.846 109.498 21.605 1.00 44.98 C
ATOM 24 P C B 426 53.597 113.665 25.053 1.00 47.32 P
ATOM 25 OP1 C B 426 52.272 113.952 25.672 1.00 44.55 O
ATOM 26 OP2 C B 426 54.340 114.757 24.375 1.00 47.79 O
ATOM 27 O5' C B 426 54.562 113.030 26.145 1.00 46.38 O
TER
Atoms:
OP1: (59.083,118.528,17.964)
OP2: (60.881,117.047,19.037)
C3': (56.790,114.515,18.568)
C1': (57.577,112.636,17.367)
C5': (57.815,116.146,16.919)
O4': (57.713,113.772,16.534)
C8: (59.999,113.016,18.050)
O2': (55.304,112.631,18.130)
C6: (61.454,109.815,18.219)
C5: (60.732,111.023,18.123)
C4: (59.383,110.927,17.829)
P: (59.957,117.329,17.912)
C4': (57.002,114.893,17.113)
C2': (56.616,113.002,18.504)
C2: (59.466,108.730,17.759)
N1: (60.777,108.664,18.027)
N3: (58.680,109.799,17.638)
N6: (62.761,109.746,18.482)
N7: (61.107,112.351,18.270)
N9: (58.924,112.218,17.751)
O5': (59.037,116.052,17.669)
O3': (55.652,115.196,19.083)
OP2: (60.881,117.047,19.037)
C3': (56.790,114.515,18.568)
C1': (57.577,112.636,17.367)
C5': (57.815,116.146,16.919)
O4': (57.713,113.772,16.534)
C8: (59.999,113.016,18.050)
O2': (55.304,112.631,18.130)
C6: (61.454,109.815,18.219)
C5: (60.732,111.023,18.123)
C4: (59.383,110.927,17.829)
P: (59.957,117.329,17.912)
C4': (57.002,114.893,17.113)
C2': (56.616,113.002,18.504)
C2: (59.466,108.730,17.759)
N1: (60.777,108.664,18.027)
N3: (58.680,109.799,17.638)
N6: (62.761,109.746,18.482)
N7: (61.107,112.351,18.270)
N9: (58.924,112.218,17.751)
O5': (59.037,116.052,17.669)
O3': (55.652,115.196,19.083)
OP1: (54.380,116.388,20.865)
OP2: (56.889,115.934,21.144)
C3': (54.475,112.097,23.147)
C1': (55.491,110.331,21.952)
C5': (53.970,113.437,21.063)
O4': (54.858,111.188,21.026)
C8: (57.659,111.664,21.876)
O2': (53.900,109.764,23.636)
C6: (60.208,109.282,21.396)
C5: (59.083,110.114,21.575)
C4: (57.846,109.498,21.605)
P: (55.555,115.509,20.652)
C4': (53.965,112.084,21.724)
C2': (54.945,110.663,23.342)
C2: (58.734,107.505,21.296)
N1: (59.994,107.955,21.256)
N3: (57.598,108.184,21.467)
N6: (61.463,109.733,21.363)
N7: (58.950,111.486,21.741)
N9: (56.933,110.502,21.815)
O5': (55.235,114.088,21.294)
O3': (53.409,112.461,24.010)
OP2: (56.889,115.934,21.144)
C3': (54.475,112.097,23.147)
C1': (55.491,110.331,21.952)
C5': (53.970,113.437,21.063)
O4': (54.858,111.188,21.026)
C8: (57.659,111.664,21.876)
O2': (53.900,109.764,23.636)
C6: (60.208,109.282,21.396)
C5: (59.083,110.114,21.575)
C4: (57.846,109.498,21.605)
P: (55.555,115.509,20.652)
C4': (53.965,112.084,21.724)
C2': (54.945,110.663,23.342)
C2: (58.734,107.505,21.296)
N1: (59.994,107.955,21.256)
N3: (57.598,108.184,21.467)
N6: (61.463,109.733,21.363)
N7: (58.950,111.486,21.741)
N9: (56.933,110.502,21.815)
O5': (55.235,114.088,21.294)
O3': (53.409,112.461,24.010)
Image (generated by PyMOL):