Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A129:A130
Extra
PDB:
ATOM 1 O3' G A 128 87.257 68.160 -2.215 1.00 83.86 O
ATOM 2 P A A 129 86.423 66.847 -1.775 1.00 85.18 P
ATOM 3 OP1 A A 129 85.034 67.338 -1.538 1.00 87.10 O
ATOM 4 OP2 A A 129 87.120 66.118 -0.686 1.00 83.57 O
ATOM 5 O5' A A 129 86.418 65.945 -3.100 1.00 84.19 O
ATOM 6 C5' A A 129 85.879 66.465 -4.332 1.00 83.04 C
ATOM 7 C4' A A 129 86.097 65.496 -5.469 1.00 82.92 C
ATOM 8 O4' A A 129 87.498 65.466 -5.847 1.00 82.04 O
ATOM 9 C3' A A 129 85.766 64.040 -5.203 1.00 83.69 C
ATOM 10 O3' A A 129 84.394 63.738 -5.248 1.00 85.12 O
ATOM 11 C2' A A 129 86.573 63.315 -6.275 1.00 82.67 C
ATOM 12 O2' A A 129 85.947 63.269 -7.544 1.00 82.53 O
ATOM 13 C1' A A 129 87.833 64.175 -6.335 1.00 80.98 C
ATOM 14 N9 A A 129 88.872 63.608 -5.481 1.00 78.68 N
ATOM 15 C8 A A 129 89.240 63.981 -4.211 1.00 78.25 C
ATOM 16 N7 A A 129 90.206 63.251 -3.704 1.00 77.58 N
ATOM 17 C5 A A 129 90.500 62.343 -4.711 1.00 77.83 C
ATOM 18 C6 A A 129 91.443 61.302 -4.800 1.00 77.59 C
ATOM 19 N6 A A 129 92.305 61.005 -3.827 1.00 79.62 N
ATOM 20 N1 A A 129 91.472 60.573 -5.938 1.00 74.96 N
ATOM 21 C2 A A 129 90.611 60.884 -6.916 1.00 76.43 C
ATOM 22 N3 A A 129 89.683 61.845 -6.956 1.00 76.54 N
ATOM 23 C4 A A 129 89.682 62.548 -5.810 1.00 78.21 C
ATOM 24 P A A 130 83.823 62.583 -4.286 1.00 86.17 P
ATOM 25 OP1 A A 130 82.337 62.582 -4.455 1.00 86.01 O
ATOM 26 OP2 A A 130 84.429 62.767 -2.929 1.00 85.30 O
ATOM 27 O5' A A 130 84.386 61.238 -4.938 1.00 84.93 O
TER
ATOM 1 O3' A B 129 84.394 63.738 -5.248 1.00 85.12 O
ATOM 2 P A B 130 83.823 62.583 -4.286 1.00 86.17 P
ATOM 3 OP1 A B 130 82.337 62.582 -4.455 1.00 86.01 O
ATOM 4 OP2 A B 130 84.429 62.767 -2.929 1.00 85.30 O
ATOM 5 O5' A B 130 84.386 61.238 -4.938 1.00 84.93 O
ATOM 6 C5' A B 130 83.943 60.822 -6.243 1.00 84.01 C
ATOM 7 C4' A B 130 84.671 59.576 -6.690 1.00 83.37 C
ATOM 8 O4' A B 130 86.088 59.864 -6.830 1.00 82.80 O
ATOM 9 C3' A B 130 84.645 58.357 -5.778 1.00 83.83 C
ATOM 10 O3' A B 130 83.450 57.592 -5.836 1.00 84.83 O
ATOM 11 C2' A B 130 85.846 57.568 -6.287 1.00 83.35 C
ATOM 12 O2' A B 130 85.589 56.861 -7.490 1.00 84.53 O
ATOM 13 C1' A B 130 86.840 58.685 -6.577 1.00 81.69 C
ATOM 14 N9 A B 130 87.716 58.897 -5.421 1.00 78.71 N
ATOM 15 C8 A B 130 87.622 59.828 -4.414 1.00 77.32 C
ATOM 16 N7 A B 130 88.567 59.725 -3.509 1.00 75.90 N
ATOM 17 C5 A B 130 89.337 58.658 -3.949 1.00 75.16 C
ATOM 18 C6 A B 130 90.489 58.045 -3.427 1.00 74.28 C
ATOM 19 N6 A B 130 91.086 58.432 -2.302 1.00 73.89 N
ATOM 20 N1 A B 130 91.013 57.005 -4.109 1.00 73.88 N
ATOM 21 C2 A B 130 90.408 56.610 -5.240 1.00 76.18 C
ATOM 22 N3 A B 130 89.320 57.103 -5.832 1.00 76.93 N
ATOM 23 C4 A B 130 88.828 58.140 -5.127 1.00 76.92 C
ATOM 24 P G B 131 83.068 56.616 -4.602 1.00 85.25 P
ATOM 25 OP1 G B 131 81.759 55.992 -5.000 1.00 84.04 O
ATOM 26 OP2 G B 131 83.188 57.364 -3.313 1.00 82.26 O
ATOM 27 O5' G B 131 84.201 55.471 -4.632 1.00 84.10 O
TER
ATOM 2 P A A 129 86.423 66.847 -1.775 1.00 85.18 P
ATOM 3 OP1 A A 129 85.034 67.338 -1.538 1.00 87.10 O
ATOM 4 OP2 A A 129 87.120 66.118 -0.686 1.00 83.57 O
ATOM 5 O5' A A 129 86.418 65.945 -3.100 1.00 84.19 O
ATOM 6 C5' A A 129 85.879 66.465 -4.332 1.00 83.04 C
ATOM 7 C4' A A 129 86.097 65.496 -5.469 1.00 82.92 C
ATOM 8 O4' A A 129 87.498 65.466 -5.847 1.00 82.04 O
ATOM 9 C3' A A 129 85.766 64.040 -5.203 1.00 83.69 C
ATOM 10 O3' A A 129 84.394 63.738 -5.248 1.00 85.12 O
ATOM 11 C2' A A 129 86.573 63.315 -6.275 1.00 82.67 C
ATOM 12 O2' A A 129 85.947 63.269 -7.544 1.00 82.53 O
ATOM 13 C1' A A 129 87.833 64.175 -6.335 1.00 80.98 C
ATOM 14 N9 A A 129 88.872 63.608 -5.481 1.00 78.68 N
ATOM 15 C8 A A 129 89.240 63.981 -4.211 1.00 78.25 C
ATOM 16 N7 A A 129 90.206 63.251 -3.704 1.00 77.58 N
ATOM 17 C5 A A 129 90.500 62.343 -4.711 1.00 77.83 C
ATOM 18 C6 A A 129 91.443 61.302 -4.800 1.00 77.59 C
ATOM 19 N6 A A 129 92.305 61.005 -3.827 1.00 79.62 N
ATOM 20 N1 A A 129 91.472 60.573 -5.938 1.00 74.96 N
ATOM 21 C2 A A 129 90.611 60.884 -6.916 1.00 76.43 C
ATOM 22 N3 A A 129 89.683 61.845 -6.956 1.00 76.54 N
ATOM 23 C4 A A 129 89.682 62.548 -5.810 1.00 78.21 C
ATOM 24 P A A 130 83.823 62.583 -4.286 1.00 86.17 P
ATOM 25 OP1 A A 130 82.337 62.582 -4.455 1.00 86.01 O
ATOM 26 OP2 A A 130 84.429 62.767 -2.929 1.00 85.30 O
ATOM 27 O5' A A 130 84.386 61.238 -4.938 1.00 84.93 O
TER
ATOM 1 O3' A B 129 84.394 63.738 -5.248 1.00 85.12 O
ATOM 2 P A B 130 83.823 62.583 -4.286 1.00 86.17 P
ATOM 3 OP1 A B 130 82.337 62.582 -4.455 1.00 86.01 O
ATOM 4 OP2 A B 130 84.429 62.767 -2.929 1.00 85.30 O
ATOM 5 O5' A B 130 84.386 61.238 -4.938 1.00 84.93 O
ATOM 6 C5' A B 130 83.943 60.822 -6.243 1.00 84.01 C
ATOM 7 C4' A B 130 84.671 59.576 -6.690 1.00 83.37 C
ATOM 8 O4' A B 130 86.088 59.864 -6.830 1.00 82.80 O
ATOM 9 C3' A B 130 84.645 58.357 -5.778 1.00 83.83 C
ATOM 10 O3' A B 130 83.450 57.592 -5.836 1.00 84.83 O
ATOM 11 C2' A B 130 85.846 57.568 -6.287 1.00 83.35 C
ATOM 12 O2' A B 130 85.589 56.861 -7.490 1.00 84.53 O
ATOM 13 C1' A B 130 86.840 58.685 -6.577 1.00 81.69 C
ATOM 14 N9 A B 130 87.716 58.897 -5.421 1.00 78.71 N
ATOM 15 C8 A B 130 87.622 59.828 -4.414 1.00 77.32 C
ATOM 16 N7 A B 130 88.567 59.725 -3.509 1.00 75.90 N
ATOM 17 C5 A B 130 89.337 58.658 -3.949 1.00 75.16 C
ATOM 18 C6 A B 130 90.489 58.045 -3.427 1.00 74.28 C
ATOM 19 N6 A B 130 91.086 58.432 -2.302 1.00 73.89 N
ATOM 20 N1 A B 130 91.013 57.005 -4.109 1.00 73.88 N
ATOM 21 C2 A B 130 90.408 56.610 -5.240 1.00 76.18 C
ATOM 22 N3 A B 130 89.320 57.103 -5.832 1.00 76.93 N
ATOM 23 C4 A B 130 88.828 58.140 -5.127 1.00 76.92 C
ATOM 24 P G B 131 83.068 56.616 -4.602 1.00 85.25 P
ATOM 25 OP1 G B 131 81.759 55.992 -5.000 1.00 84.04 O
ATOM 26 OP2 G B 131 83.188 57.364 -3.313 1.00 82.26 O
ATOM 27 O5' G B 131 84.201 55.471 -4.632 1.00 84.10 O
TER
Atoms:
OP1: (85.034,67.338,-1.538)
OP2: (87.120,66.118,-0.686)
C3': (85.766,64.040,-5.203)
C1': (87.833,64.175,-6.335)
C5': (85.879,66.465,-4.332)
O4': (87.498,65.466,-5.847)
C8: (89.240,63.981,-4.211)
O2': (85.947,63.269,-7.544)
C6: (91.443,61.302,-4.800)
C5: (90.500,62.343,-4.711)
C4: (89.682,62.548,-5.810)
P: (86.423,66.847,-1.775)
C4': (86.097,65.496,-5.469)
C2': (86.573,63.315,-6.275)
C2: (90.611,60.884,-6.916)
N1: (91.472,60.573,-5.938)
N3: (89.683,61.845,-6.956)
N6: (92.305,61.005,-3.827)
N7: (90.206,63.251,-3.704)
N9: (88.872,63.608,-5.481)
O5': (86.418,65.945,-3.100)
O3': (84.394,63.738,-5.248)
OP2: (87.120,66.118,-0.686)
C3': (85.766,64.040,-5.203)
C1': (87.833,64.175,-6.335)
C5': (85.879,66.465,-4.332)
O4': (87.498,65.466,-5.847)
C8: (89.240,63.981,-4.211)
O2': (85.947,63.269,-7.544)
C6: (91.443,61.302,-4.800)
C5: (90.500,62.343,-4.711)
C4: (89.682,62.548,-5.810)
P: (86.423,66.847,-1.775)
C4': (86.097,65.496,-5.469)
C2': (86.573,63.315,-6.275)
C2: (90.611,60.884,-6.916)
N1: (91.472,60.573,-5.938)
N3: (89.683,61.845,-6.956)
N6: (92.305,61.005,-3.827)
N7: (90.206,63.251,-3.704)
N9: (88.872,63.608,-5.481)
O5': (86.418,65.945,-3.100)
O3': (84.394,63.738,-5.248)
OP1: (82.337,62.582,-4.455)
OP2: (84.429,62.767,-2.929)
C3': (84.645,58.357,-5.778)
C1': (86.840,58.685,-6.577)
C5': (83.943,60.822,-6.243)
O4': (86.088,59.864,-6.830)
C8: (87.622,59.828,-4.414)
O2': (85.589,56.861,-7.490)
C6: (90.489,58.045,-3.427)
C5: (89.337,58.658,-3.949)
C4: (88.828,58.140,-5.127)
P: (83.823,62.583,-4.286)
C4': (84.671,59.576,-6.690)
C2': (85.846,57.568,-6.287)
C2: (90.408,56.610,-5.240)
N1: (91.013,57.005,-4.109)
N3: (89.320,57.103,-5.832)
N6: (91.086,58.432,-2.302)
N7: (88.567,59.725,-3.509)
N9: (87.716,58.897,-5.421)
O5': (84.386,61.238,-4.938)
O3': (83.450,57.592,-5.836)
OP2: (84.429,62.767,-2.929)
C3': (84.645,58.357,-5.778)
C1': (86.840,58.685,-6.577)
C5': (83.943,60.822,-6.243)
O4': (86.088,59.864,-6.830)
C8: (87.622,59.828,-4.414)
O2': (85.589,56.861,-7.490)
C6: (90.489,58.045,-3.427)
C5: (89.337,58.658,-3.949)
C4: (88.828,58.140,-5.127)
P: (83.823,62.583,-4.286)
C4': (84.671,59.576,-6.690)
C2': (85.846,57.568,-6.287)
C2: (90.408,56.610,-5.240)
N1: (91.013,57.005,-4.109)
N3: (89.320,57.103,-5.832)
N6: (91.086,58.432,-2.302)
N7: (88.567,59.725,-3.509)
N9: (87.716,58.897,-5.421)
O5': (84.386,61.238,-4.938)
O3': (83.450,57.592,-5.836)
Image (generated by PyMOL):