ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1EHZ:A34:A35

Extra

PDB:
ATOM 1 P A A 34 69.287 35.959 -8.637 1.00 69.94 P
ATOM 2 OP1 A A 34 68.963 37.372 -8.988 1.00 66.80 O
ATOM 3 OP2 A A 34 70.613 35.629 -8.027 1.00 67.49 O
ATOM 4 O5' A A 34 68.138 35.409 -7.674 1.00 69.12 O
ATOM 5 C5' A A 34 66.791 35.233 -8.158 1.00 71.95 C
ATOM 6 C4' A A 34 65.999 34.348 -7.216 1.00 73.29 C
ATOM 7 O4' A A 34 66.330 32.957 -7.426 1.00 71.52 O
ATOM 8 C3' A A 34 66.228 34.575 -5.733 1.00 75.03 C
ATOM 9 O3' A A 34 65.477 35.689 -5.246 1.00 79.27 O
ATOM 10 C2' A A 34 65.806 33.241 -5.122 1.00 73.35 C
ATOM 11 O2' A A 34 64.415 33.130 -4.902 1.00 73.82 O
ATOM 12 C1' A A 34 66.202 32.251 -6.217 1.00 69.82 C
ATOM 13 N9 A A 34 67.458 31.568 -5.953 1.00 66.95 N
ATOM 14 C8 A A 34 68.714 31.908 -6.382 1.00 65.90 C
ATOM 15 N7 A A 34 69.650 31.095 -5.969 1.00 63.58 N
ATOM 16 C5 A A 34 68.964 30.158 -5.217 1.00 64.51 C
ATOM 17 C6 A A 34 69.394 29.030 -4.505 1.00 64.64 C
ATOM 18 N6 A A 34 70.676 28.646 -4.442 1.00 64.41 N
ATOM 19 N1 A A 34 68.454 28.302 -3.853 1.00 64.67 N
ATOM 20 C2 A A 34 67.173 28.694 -3.936 1.00 64.93 C
ATOM 21 N3 A A 34 66.650 29.737 -4.582 1.00 64.37 N
ATOM 22 C4 A A 34 67.612 30.435 -5.203 1.00 64.99 C
ATOM 23 P A A 35 66.113 36.647 -4.115 1.00 81.67 P
ATOM 24 OP1 A A 35 65.045 37.623 -3.738 1.00 81.59 O
ATOM 25 OP2 A A 35 67.432 37.156 -4.600 1.00 82.66 O
ATOM 26 O5' A A 35 66.374 35.639 -2.911 1.00 83.98 O
TER

ATOM 1 O3' A B 34 65.477 35.689 -5.246 1.00 79.27 O
ATOM 2 P A B 35 66.113 36.647 -4.115 1.00 81.67 P
ATOM 3 OP1 A B 35 65.045 37.623 -3.738 1.00 81.59 O
ATOM 4 OP2 A B 35 67.432 37.156 -4.600 1.00 82.66 O
ATOM 5 O5' A B 35 66.374 35.639 -2.911 1.00 83.98 O
ATOM 6 C5' A B 35 65.302 34.813 -2.451 1.00 87.71 C
ATOM 7 C4' A B 35 65.801 33.698 -1.565 1.00 90.67 C
ATOM 8 O4' A B 35 66.568 32.696 -2.288 1.00 89.82 O
ATOM 9 C3' A B 35 66.712 33.999 -0.388 1.00 92.78 C
ATOM 10 O3' A B 35 66.031 34.644 0.701 1.00 97.07 O
ATOM 11 C2' A B 35 67.162 32.587 0.010 1.00 91.11 C
ATOM 12 O2' A B 35 66.278 31.932 0.896 1.00 92.17 O
ATOM 13 C1' A B 35 67.143 31.833 -1.328 1.00 88.90 C
ATOM 14 N9 A B 35 68.488 31.414 -1.719 1.00 85.94 N
ATOM 15 C8 A B 35 69.437 32.000 -2.530 1.00 84.74 C
ATOM 16 N7 A B 35 70.588 31.361 -2.537 1.00 83.82 N
ATOM 17 C5 A B 35 70.369 30.267 -1.700 1.00 84.29 C
ATOM 18 C6 A B 35 71.195 29.192 -1.278 1.00 84.05 C
ATOM 19 N6 A B 35 72.462 29.017 -1.673 1.00 85.59 N
ATOM 20 N1 A B 35 70.658 28.283 -0.430 1.00 83.44 N
ATOM 21 C2 A B 35 69.385 28.429 -0.052 1.00 82.14 C
ATOM 22 N3 A B 35 68.512 29.376 -0.383 1.00 82.89 N
ATOM 23 C4 A B 35 69.074 30.277 -1.213 1.00 84.44 C
TER

Atoms:
OP1: (68.963,37.372,-8.988)
OP2: (70.613,35.629,-8.027)
C3': (66.228,34.575,-5.733)
C1': (66.202,32.251,-6.217)
C5': (66.791,35.233,-8.158)
O4': (66.330,32.957,-7.426)
C8: (68.714,31.908,-6.382)
O2': (64.415,33.130,-4.902)
C6: (69.394,29.030,-4.505)
C5: (68.964,30.158,-5.217)
C4: (67.612,30.435,-5.203)
P: (69.287,35.959,-8.637)
C4': (65.999,34.348,-7.216)
C2': (65.806,33.241,-5.122)
C2: (67.173,28.694,-3.936)
N1: (68.454,28.302,-3.853)
N3: (66.650,29.737,-4.582)
N6: (70.676,28.646,-4.442)
N7: (69.650,31.095,-5.969)
N9: (67.458,31.568,-5.953)
O5': (68.138,35.409,-7.674)
O3': (65.477,35.689,-5.246)
OP1: (65.045,37.623,-3.738)
OP2: (67.432,37.156,-4.600)
C3': (66.712,33.999,-0.388)
C1': (67.143,31.833,-1.328)
C5': (65.302,34.813,-2.451)
O4': (66.568,32.696,-2.288)
C8: (69.437,32.000,-2.530)
O2': (66.278,31.932,0.896)
C6: (71.195,29.192,-1.278)
C5: (70.369,30.267,-1.700)
C4: (69.074,30.277,-1.213)
P: (66.113,36.647,-4.115)
C4': (65.801,33.698,-1.565)
C2': (67.162,32.587,0.010)
C2: (69.385,28.429,-0.052)
N1: (70.658,28.283,-0.430)
N3: (68.512,29.376,-0.383)
N6: (72.462,29.017,-1.673)
N7: (70.588,31.361,-2.537)
N9: (68.488,31.414,-1.719)
O5': (66.374,35.639,-2.911)
O3': (66.031,34.644,0.701)
Image (generated by PyMOL):
PyMOL image
show in jmol