ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1970:1971

Extra

PDB:
ATOM 1 O3' A A 969 -36.283 -52.288 18.390 1.00126.41 O
ATOM 2 P A A 970 -34.732 -51.904 18.333 1.00118.84 P
ATOM 3 OP1 A A 970 -34.629 -50.463 18.686 1.00118.71 O
ATOM 4 OP2 A A 970 -34.239 -52.352 17.002 1.00118.56 O
ATOM 5 O5' A A 970 -34.102 -52.815 19.500 1.00118.90 O
ATOM 6 C5' A A 970 -32.755 -53.290 19.441 1.00118.56 C
ATOM 7 C4' A A 970 -32.682 -54.805 19.546 1.00118.71 C
ATOM 8 O4' A A 970 -33.597 -55.400 18.597 1.00118.90 O
ATOM 9 C3' A A 970 -31.322 -55.434 19.233 1.00118.35 C
ATOM 10 O3' A A 970 -30.488 -55.520 20.372 1.00118.27 O
ATOM 11 C2' A A 970 -31.661 -56.800 18.638 1.00118.50 C
ATOM 12 O2' A A 970 -31.753 -57.788 19.653 1.00118.76 O
ATOM 13 C1' A A 970 -33.052 -56.574 18.044 1.00118.79 C
ATOM 14 N9 A A 970 -33.039 -56.431 16.576 1.00118.57 N
ATOM 15 C8 A A 970 -33.480 -55.320 15.895 1.00118.50 C
ATOM 16 N7 A A 970 -33.412 -55.438 14.591 1.00118.32 N
ATOM 17 C5 A A 970 -32.909 -56.728 14.394 1.00118.28 C
ATOM 18 C6 A A 970 -32.614 -57.469 13.219 1.00118.11 C
ATOM 19 N6 A A 970 -32.788 -56.976 11.987 1.00117.95 N
ATOM 20 N1 A A 970 -32.125 -58.734 13.357 1.00118.12 N
ATOM 21 C2 A A 970 -31.959 -59.211 14.603 1.00118.29 C
ATOM 22 N3 A A 970 -32.202 -58.618 15.781 1.00118.45 N
ATOM 23 C4 A A 970 -32.680 -57.360 15.614 1.00118.44 C
ATOM 24 P A A 971 -28.978 -54.974 20.313 1.00134.38 P
ATOM 25 OP1 A A 971 -28.452 -55.006 21.703 1.00134.42 O
ATOM 26 OP2 A A 971 -29.014 -53.673 19.589 1.00134.16 O
ATOM 27 O5' A A 971 -28.231 -56.073 19.423 1.00134.16 O
TER

ATOM 1 O3' A B 970 -30.488 -55.520 20.372 1.00118.27 O
ATOM 2 P A B 971 -28.978 -54.974 20.313 1.00134.38 P
ATOM 3 OP1 A B 971 -28.452 -55.006 21.703 1.00134.42 O
ATOM 4 OP2 A B 971 -29.014 -53.673 19.589 1.00134.16 O
ATOM 5 O5' A B 971 -28.231 -56.073 19.423 1.00134.16 O
ATOM 6 C5' A B 971 -27.711 -57.267 20.006 1.00134.21 C
ATOM 7 C4' A B 971 -27.508 -58.357 18.971 1.00134.13 C
ATOM 8 O4' A B 971 -28.687 -58.463 18.130 1.00134.36 O
ATOM 9 C3' A B 971 -26.349 -58.150 17.999 1.00133.65 C
ATOM 10 O3' A B 971 -25.108 -58.615 18.521 1.00133.43 O
ATOM 11 C2' A B 971 -26.801 -58.893 16.733 1.00133.69 C
ATOM 12 O2' A B 971 -26.483 -60.277 16.812 1.00133.75 O
ATOM 13 C1' A B 971 -28.323 -58.747 16.794 1.00134.10 C
ATOM 14 N9 A B 971 -28.843 -57.665 15.923 1.00134.02 N
ATOM 15 C8 A B 971 -29.337 -56.459 16.362 1.00134.10 C
ATOM 16 N7 A B 971 -29.784 -55.672 15.417 1.00134.02 N
ATOM 17 C5 A B 971 -29.595 -56.404 14.255 1.00133.88 C
ATOM 18 C6 A B 971 -29.869 -56.100 12.902 1.00133.75 C
ATOM 19 N6 A B 971 -30.417 -54.948 12.496 1.00133.73 N
ATOM 20 N1 A B 971 -29.565 -57.041 11.976 1.00133.64 N
ATOM 21 C2 A B 971 -29.016 -58.193 12.400 1.00133.66 C
ATOM 22 N3 A B 971 -28.706 -58.591 13.642 1.00133.77 N
ATOM 23 C4 A B 971 -29.023 -57.641 14.547 1.00133.89 C
ATOM 24 P U B 972 -23.952 -57.576 18.945 1.00186.35 P
ATOM 25 OP1 U B 972 -24.165 -57.242 20.371 1.00186.57 O
ATOM 26 OP2 U B 972 -23.955 -56.478 17.946 1.00186.11 O
ATOM 27 O5' U B 972 -22.630 -58.441 18.786 1.00186.06 O
TER

Atoms:
OP1: (-34.629,-50.463,18.686)
OP2: (-34.239,-52.352,17.002)
C3': (-31.322,-55.434,19.233)
C1': (-33.052,-56.574,18.044)
C5': (-32.755,-53.290,19.441)
O4': (-33.597,-55.400,18.597)
C8: (-33.480,-55.320,15.895)
O2': (-31.753,-57.788,19.653)
C6: (-32.614,-57.469,13.219)
C5: (-32.909,-56.728,14.394)
C4: (-32.680,-57.360,15.614)
P: (-34.732,-51.904,18.333)
C4': (-32.682,-54.805,19.546)
C2': (-31.661,-56.800,18.638)
C2: (-31.959,-59.211,14.603)
N1: (-32.125,-58.734,13.357)
N3: (-32.202,-58.618,15.781)
N6: (-32.788,-56.976,11.987)
N7: (-33.412,-55.438,14.591)
N9: (-33.039,-56.431,16.576)
O5': (-34.102,-52.815,19.500)
O3': (-30.488,-55.520,20.372)
OP1: (-28.452,-55.006,21.703)
OP2: (-29.014,-53.673,19.589)
C3': (-26.349,-58.150,17.999)
C1': (-28.323,-58.747,16.794)
C5': (-27.711,-57.267,20.006)
O4': (-28.687,-58.463,18.130)
C8: (-29.337,-56.459,16.362)
O2': (-26.483,-60.277,16.812)
C6: (-29.869,-56.100,12.902)
C5: (-29.595,-56.404,14.255)
C4: (-29.023,-57.641,14.547)
P: (-28.978,-54.974,20.313)
C4': (-27.508,-58.357,18.971)
C2': (-26.801,-58.893,16.733)
C2: (-29.016,-58.193,12.400)
N1: (-29.565,-57.041,11.976)
N3: (-28.706,-58.591,13.642)
N6: (-30.417,-54.948,12.496)
N7: (-29.784,-55.672,15.417)
N9: (-28.843,-57.665,15.923)
O5': (-28.231,-56.073,19.423)
O3': (-25.108,-58.615,18.521)
Image (generated by PyMOL):
PyMOL image
show in jmol