ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKZ:A44:A45

Extra

PDB:
ATOM 1 O3' A A 43 -14.748 4.316 -39.538 1.00 58.89 O
ATOM 2 P A A 44 -14.475 4.381 -37.955 1.00 72.50 P
ATOM 3 OP1 A A 44 -15.650 5.028 -37.342 1.00 67.97 O
ATOM 4 OP2 A A 44 -13.150 5.001 -37.767 1.00 78.22 O
ATOM 5 O5' A A 44 -14.418 2.842 -37.543 1.00 45.01 O
ATOM 6 C5' A A 44 -15.453 1.956 -37.936 1.00 44.35 C
ATOM 7 C4' A A 44 -15.065 0.505 -37.768 1.00 45.10 C
ATOM 8 O4' A A 44 -14.082 0.128 -38.764 1.00 48.08 O
ATOM 9 C3' A A 44 -14.426 0.113 -36.445 1.00 45.98 C
ATOM 10 O3' A A 44 -15.382 -0.076 -35.416 1.00 50.84 O
ATOM 11 C2' A A 44 -13.703 -1.165 -36.825 1.00 52.51 C
ATOM 12 O2' A A 44 -14.633 -2.228 -36.988 1.00 32.40 O
ATOM 13 C1' A A 44 -13.168 -0.788 -38.200 1.00 51.82 C
ATOM 14 N9 A A 44 -11.861 -0.119 -38.121 1.00 51.86 N
ATOM 15 C8 A A 44 -11.691 1.238 -38.039 1.00 49.77 C
ATOM 16 N7 A A 44 -10.442 1.610 -37.994 1.00 53.52 N
ATOM 17 C5 A A 44 -9.739 0.416 -38.066 1.00 57.81 C
ATOM 18 C6 A A 44 -8.357 0.150 -38.081 1.00 57.63 C
ATOM 19 N6 A A 44 -7.424 1.119 -38.015 1.00 46.46 N
ATOM 20 N1 A A 44 -7.978 -1.154 -38.165 1.00 61.42 N
ATOM 21 C2 A A 44 -8.929 -2.099 -38.231 1.00 61.27 C
ATOM 22 N3 A A 44 -10.256 -1.964 -38.226 1.00 61.79 N
ATOM 23 C4 A A 44 -10.601 -0.666 -38.146 1.00 57.30 C
ATOM 24 P A A 45 -15.067 0.335 -33.893 1.00 53.20 P
ATOM 25 OP1 A A 45 -16.350 0.250 -33.166 1.00 53.44 O
ATOM 26 OP2 A A 45 -14.353 1.631 -33.913 1.00 53.84 O
ATOM 27 O5' A A 45 -14.092 -0.828 -33.415 1.00 35.79 O
TER

ATOM 1 O3' A B 44 -15.382 -0.076 -35.416 1.00 50.84 O
ATOM 2 P A B 45 -15.067 0.335 -33.893 1.00 53.20 P
ATOM 3 OP1 A B 45 -16.350 0.250 -33.166 1.00 53.44 O
ATOM 4 OP2 A B 45 -14.353 1.631 -33.913 1.00 53.84 O
ATOM 5 O5' A B 45 -14.092 -0.828 -33.415 1.00 35.79 O
ATOM 6 C5' A B 45 -14.547 -2.170 -33.359 1.00 34.84 C
ATOM 7 C4' A B 45 -13.408 -3.128 -33.190 1.00 36.16 C
ATOM 8 O4' A B 45 -12.559 -3.066 -34.362 1.00 48.36 O
ATOM 9 C3' A B 45 -12.467 -2.850 -32.023 1.00 44.20 C
ATOM 10 O3' A B 45 -12.951 -3.375 -30.798 1.00 57.65 O
ATOM 11 C2' A B 45 -11.188 -3.510 -32.489 1.00 48.76 C
ATOM 12 O2' A B 45 -11.290 -4.919 -32.353 1.00 50.35 O
ATOM 13 C1' A B 45 -11.209 -3.160 -33.983 1.00 50.97 C
ATOM 14 N9 A B 45 -10.557 -1.851 -34.246 1.00 55.80 N
ATOM 15 C8 A B 45 -11.110 -0.578 -34.206 1.00 53.35 C
ATOM 16 N7 A B 45 -10.263 0.404 -34.450 1.00 41.49 N
ATOM 17 C5 A B 45 -9.066 -0.266 -34.653 1.00 42.86 C
ATOM 18 C6 A B 45 -7.775 0.203 -34.953 1.00 45.89 C
ATOM 19 N6 A B 45 -7.485 1.496 -35.099 1.00 47.33 N
ATOM 20 N1 A B 45 -6.792 -0.716 -35.103 1.00 44.59 N
ATOM 21 C2 A B 45 -7.102 -2.018 -34.957 1.00 46.08 C
ATOM 22 N3 A B 45 -8.276 -2.591 -34.686 1.00 44.09 N
ATOM 23 C4 A B 45 -9.225 -1.645 -34.538 1.00 46.95 C
ATOM 24 P C B 46 -12.360 -2.881 -29.375 1.00 56.24 P
ATOM 25 OP1 C B 46 -13.274 -3.393 -28.340 1.00 66.33 O
ATOM 26 OP2 C B 46 -12.122 -1.417 -29.457 1.00 51.13 O
ATOM 27 O5' C B 46 -10.980 -3.632 -29.276 1.00 38.44 O
TER

Atoms:
OP1: (-15.650,5.028,-37.342)
OP2: (-13.150,5.001,-37.767)
C3': (-14.426,0.113,-36.445)
C1': (-13.168,-0.788,-38.200)
C5': (-15.453,1.956,-37.936)
O4': (-14.082,0.128,-38.764)
C8: (-11.691,1.238,-38.039)
O2': (-14.633,-2.228,-36.988)
C6: (-8.357,0.150,-38.081)
C5: (-9.739,0.416,-38.066)
C4: (-10.601,-0.666,-38.146)
P: (-14.475,4.381,-37.955)
C4': (-15.065,0.505,-37.768)
C2': (-13.703,-1.165,-36.825)
C2: (-8.929,-2.099,-38.231)
N1: (-7.978,-1.154,-38.165)
N3: (-10.256,-1.964,-38.226)
N6: (-7.424,1.119,-38.015)
N7: (-10.442,1.610,-37.994)
N9: (-11.861,-0.119,-38.121)
O5': (-14.418,2.842,-37.543)
O3': (-15.382,-0.076,-35.416)
OP1: (-16.350,0.250,-33.166)
OP2: (-14.353,1.631,-33.913)
C3': (-12.467,-2.850,-32.023)
C1': (-11.209,-3.160,-33.983)
C5': (-14.547,-2.170,-33.359)
O4': (-12.559,-3.066,-34.362)
C8: (-11.110,-0.578,-34.206)
O2': (-11.290,-4.919,-32.353)
C6: (-7.775,0.203,-34.953)
C5: (-9.066,-0.266,-34.653)
C4: (-9.225,-1.645,-34.538)
P: (-15.067,0.335,-33.893)
C4': (-13.408,-3.128,-33.190)
C2': (-11.188,-3.510,-32.489)
C2: (-7.102,-2.018,-34.957)
N1: (-6.792,-0.716,-35.103)
N3: (-8.276,-2.591,-34.686)
N6: (-7.485,1.496,-35.099)
N7: (-10.263,0.404,-34.450)
N9: (-10.557,-1.851,-34.246)
O5': (-14.092,-0.828,-33.415)
O3': (-12.951,-3.375,-30.798)
Image (generated by PyMOL):
PyMOL image
show in jmol