Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01417:01418
Extra
PDB:
ATOM 1 O3' U A1416 102.039 154.888 49.692 1.00 45.89 O
ATOM 2 P A A1417 101.548 153.532 50.399 1.00 47.51 P
ATOM 3 OP1 A A1417 102.749 152.651 50.477 1.00 45.88 O
ATOM 4 OP2 A A1417 100.325 153.054 49.709 1.00 47.24 O
ATOM 5 O5' A A1417 101.144 153.959 51.881 1.00 46.44 O
ATOM 6 C5' A A1417 102.152 154.336 52.832 1.00 45.72 C
ATOM 7 C4' A A1417 101.682 154.088 54.246 1.00 46.47 C
ATOM 8 O4' A A1417 100.702 155.074 54.648 1.00 46.40 O
ATOM 9 C3' A A1417 100.994 152.764 54.524 1.00 47.42 C
ATOM 10 O3' A A1417 101.938 151.709 54.642 1.00 49.15 O
ATOM 11 C2' A A1417 100.279 153.050 55.841 1.00 47.29 C
ATOM 12 O2' A A1417 101.143 152.992 56.959 1.00 47.55 O
ATOM 13 C1' A A1417 99.865 154.510 55.647 1.00 46.35 C
ATOM 14 N9 A A1417 98.468 154.756 55.288 1.00 44.46 N
ATOM 15 C8 A A1417 97.934 154.965 54.042 1.00 43.61 C
ATOM 16 N7 A A1417 96.663 155.289 54.061 1.00 44.75 N
ATOM 17 C5 A A1417 96.330 155.259 55.408 1.00 43.97 C
ATOM 18 C6 A A1417 95.136 155.536 56.096 1.00 43.11 C
ATOM 19 N6 A A1417 94.009 155.924 55.499 1.00 43.74 N
ATOM 20 N1 A A1417 95.141 155.411 57.439 1.00 42.91 N
ATOM 21 C2 A A1417 96.272 155.041 58.040 1.00 43.12 C
ATOM 22 N3 A A1417 97.459 154.762 57.505 1.00 43.47 N
ATOM 23 C4 A A1417 97.423 154.897 56.171 1.00 43.71 C
ATOM 24 P A A1418 101.601 150.266 54.021 1.00 52.50 P
ATOM 25 OP1 A A1418 102.881 149.545 53.738 1.00 49.99 O
ATOM 26 OP2 A A1418 100.607 150.475 52.914 1.00 49.24 O
ATOM 27 O5' A A1418 100.867 149.518 55.223 1.00 48.25 O
TER
ATOM 1 O3' A B1417 101.938 151.709 54.642 1.00 49.15 O
ATOM 2 P A B1418 101.601 150.266 54.021 1.00 52.50 P
ATOM 3 OP1 A B1418 102.881 149.545 53.738 1.00 49.99 O
ATOM 4 OP2 A B1418 100.607 150.475 52.914 1.00 49.24 O
ATOM 5 O5' A B1418 100.867 149.518 55.223 1.00 48.25 O
ATOM 6 C5' A B1418 101.582 149.118 56.410 1.00 43.24 C
ATOM 7 C4' A B1418 100.597 148.787 57.503 1.00 42.50 C
ATOM 8 O4' A B1418 99.784 149.965 57.736 1.00 42.16 O
ATOM 9 C3' A B1418 99.588 147.696 57.161 1.00 42.87 C
ATOM 10 O3' A B1418 100.072 146.403 57.490 1.00 42.28 O
ATOM 11 C2' A B1418 98.399 148.060 58.037 1.00 42.55 C
ATOM 12 O2' A B1418 98.573 147.655 59.383 1.00 46.42 O
ATOM 13 C1' A B1418 98.438 149.586 57.971 1.00 41.19 C
ATOM 14 N9 A B1418 97.623 150.142 56.895 1.00 38.95 N
ATOM 15 C8 A B1418 97.886 150.110 55.547 1.00 38.31 C
ATOM 16 N7 A B1418 96.978 150.709 54.819 1.00 39.58 N
ATOM 17 C5 A B1418 96.053 151.167 55.747 1.00 37.35 C
ATOM 18 C6 A B1418 94.855 151.889 55.610 1.00 35.99 C
ATOM 19 N6 A B1418 94.373 152.308 54.437 1.00 33.54 N
ATOM 20 N1 A B1418 94.163 152.178 56.734 1.00 37.30 N
ATOM 21 C2 A B1418 94.659 151.777 57.915 1.00 38.83 C
ATOM 22 N3 A B1418 95.780 151.100 58.172 1.00 38.58 N
ATOM 23 C4 A B1418 96.436 150.820 57.031 1.00 38.01 C
ATOM 24 P G B1419 100.307 145.317 56.336 1.00 45.24 P
ATOM 25 OP1 G B1419 100.576 144.058 57.079 1.00 42.78 O
ATOM 26 OP2 G B1419 101.324 145.850 55.394 1.00 46.77 O
ATOM 27 O5' G B1419 98.927 145.229 55.532 1.00 44.07 O
TER
ATOM 2 P A A1417 101.548 153.532 50.399 1.00 47.51 P
ATOM 3 OP1 A A1417 102.749 152.651 50.477 1.00 45.88 O
ATOM 4 OP2 A A1417 100.325 153.054 49.709 1.00 47.24 O
ATOM 5 O5' A A1417 101.144 153.959 51.881 1.00 46.44 O
ATOM 6 C5' A A1417 102.152 154.336 52.832 1.00 45.72 C
ATOM 7 C4' A A1417 101.682 154.088 54.246 1.00 46.47 C
ATOM 8 O4' A A1417 100.702 155.074 54.648 1.00 46.40 O
ATOM 9 C3' A A1417 100.994 152.764 54.524 1.00 47.42 C
ATOM 10 O3' A A1417 101.938 151.709 54.642 1.00 49.15 O
ATOM 11 C2' A A1417 100.279 153.050 55.841 1.00 47.29 C
ATOM 12 O2' A A1417 101.143 152.992 56.959 1.00 47.55 O
ATOM 13 C1' A A1417 99.865 154.510 55.647 1.00 46.35 C
ATOM 14 N9 A A1417 98.468 154.756 55.288 1.00 44.46 N
ATOM 15 C8 A A1417 97.934 154.965 54.042 1.00 43.61 C
ATOM 16 N7 A A1417 96.663 155.289 54.061 1.00 44.75 N
ATOM 17 C5 A A1417 96.330 155.259 55.408 1.00 43.97 C
ATOM 18 C6 A A1417 95.136 155.536 56.096 1.00 43.11 C
ATOM 19 N6 A A1417 94.009 155.924 55.499 1.00 43.74 N
ATOM 20 N1 A A1417 95.141 155.411 57.439 1.00 42.91 N
ATOM 21 C2 A A1417 96.272 155.041 58.040 1.00 43.12 C
ATOM 22 N3 A A1417 97.459 154.762 57.505 1.00 43.47 N
ATOM 23 C4 A A1417 97.423 154.897 56.171 1.00 43.71 C
ATOM 24 P A A1418 101.601 150.266 54.021 1.00 52.50 P
ATOM 25 OP1 A A1418 102.881 149.545 53.738 1.00 49.99 O
ATOM 26 OP2 A A1418 100.607 150.475 52.914 1.00 49.24 O
ATOM 27 O5' A A1418 100.867 149.518 55.223 1.00 48.25 O
TER
ATOM 1 O3' A B1417 101.938 151.709 54.642 1.00 49.15 O
ATOM 2 P A B1418 101.601 150.266 54.021 1.00 52.50 P
ATOM 3 OP1 A B1418 102.881 149.545 53.738 1.00 49.99 O
ATOM 4 OP2 A B1418 100.607 150.475 52.914 1.00 49.24 O
ATOM 5 O5' A B1418 100.867 149.518 55.223 1.00 48.25 O
ATOM 6 C5' A B1418 101.582 149.118 56.410 1.00 43.24 C
ATOM 7 C4' A B1418 100.597 148.787 57.503 1.00 42.50 C
ATOM 8 O4' A B1418 99.784 149.965 57.736 1.00 42.16 O
ATOM 9 C3' A B1418 99.588 147.696 57.161 1.00 42.87 C
ATOM 10 O3' A B1418 100.072 146.403 57.490 1.00 42.28 O
ATOM 11 C2' A B1418 98.399 148.060 58.037 1.00 42.55 C
ATOM 12 O2' A B1418 98.573 147.655 59.383 1.00 46.42 O
ATOM 13 C1' A B1418 98.438 149.586 57.971 1.00 41.19 C
ATOM 14 N9 A B1418 97.623 150.142 56.895 1.00 38.95 N
ATOM 15 C8 A B1418 97.886 150.110 55.547 1.00 38.31 C
ATOM 16 N7 A B1418 96.978 150.709 54.819 1.00 39.58 N
ATOM 17 C5 A B1418 96.053 151.167 55.747 1.00 37.35 C
ATOM 18 C6 A B1418 94.855 151.889 55.610 1.00 35.99 C
ATOM 19 N6 A B1418 94.373 152.308 54.437 1.00 33.54 N
ATOM 20 N1 A B1418 94.163 152.178 56.734 1.00 37.30 N
ATOM 21 C2 A B1418 94.659 151.777 57.915 1.00 38.83 C
ATOM 22 N3 A B1418 95.780 151.100 58.172 1.00 38.58 N
ATOM 23 C4 A B1418 96.436 150.820 57.031 1.00 38.01 C
ATOM 24 P G B1419 100.307 145.317 56.336 1.00 45.24 P
ATOM 25 OP1 G B1419 100.576 144.058 57.079 1.00 42.78 O
ATOM 26 OP2 G B1419 101.324 145.850 55.394 1.00 46.77 O
ATOM 27 O5' G B1419 98.927 145.229 55.532 1.00 44.07 O
TER
Atoms:
OP1: (102.749,152.651,50.477)
OP2: (100.325,153.054,49.709)
C3': (100.994,152.764,54.524)
C1': (99.865,154.510,55.647)
C5': (102.152,154.336,52.832)
O4': (100.702,155.074,54.648)
C8: (97.934,154.965,54.042)
O2': (101.143,152.992,56.959)
C6: (95.136,155.536,56.096)
C5: (96.330,155.259,55.408)
C4: (97.423,154.897,56.171)
P: (101.548,153.532,50.399)
C4': (101.682,154.088,54.246)
C2': (100.279,153.050,55.841)
C2: (96.272,155.041,58.040)
N1: (95.141,155.411,57.439)
N3: (97.459,154.762,57.505)
N6: (94.009,155.924,55.499)
N7: (96.663,155.289,54.061)
N9: (98.468,154.756,55.288)
O5': (101.144,153.959,51.881)
O3': (101.938,151.709,54.642)
OP2: (100.325,153.054,49.709)
C3': (100.994,152.764,54.524)
C1': (99.865,154.510,55.647)
C5': (102.152,154.336,52.832)
O4': (100.702,155.074,54.648)
C8: (97.934,154.965,54.042)
O2': (101.143,152.992,56.959)
C6: (95.136,155.536,56.096)
C5: (96.330,155.259,55.408)
C4: (97.423,154.897,56.171)
P: (101.548,153.532,50.399)
C4': (101.682,154.088,54.246)
C2': (100.279,153.050,55.841)
C2: (96.272,155.041,58.040)
N1: (95.141,155.411,57.439)
N3: (97.459,154.762,57.505)
N6: (94.009,155.924,55.499)
N7: (96.663,155.289,54.061)
N9: (98.468,154.756,55.288)
O5': (101.144,153.959,51.881)
O3': (101.938,151.709,54.642)
OP1: (102.881,149.545,53.738)
OP2: (100.607,150.475,52.914)
C3': (99.588,147.696,57.161)
C1': (98.438,149.586,57.971)
C5': (101.582,149.118,56.410)
O4': (99.784,149.965,57.736)
C8: (97.886,150.110,55.547)
O2': (98.573,147.655,59.383)
C6: (94.855,151.889,55.610)
C5: (96.053,151.167,55.747)
C4: (96.436,150.820,57.031)
P: (101.601,150.266,54.021)
C4': (100.597,148.787,57.503)
C2': (98.399,148.060,58.037)
C2: (94.659,151.777,57.915)
N1: (94.163,152.178,56.734)
N3: (95.780,151.100,58.172)
N6: (94.373,152.308,54.437)
N7: (96.978,150.709,54.819)
N9: (97.623,150.142,56.895)
O5': (100.867,149.518,55.223)
O3': (100.072,146.403,57.490)
OP2: (100.607,150.475,52.914)
C3': (99.588,147.696,57.161)
C1': (98.438,149.586,57.971)
C5': (101.582,149.118,56.410)
O4': (99.784,149.965,57.736)
C8: (97.886,150.110,55.547)
O2': (98.573,147.655,59.383)
C6: (94.855,151.889,55.610)
C5: (96.053,151.167,55.747)
C4: (96.436,150.820,57.031)
P: (101.601,150.266,54.021)
C4': (100.597,148.787,57.503)
C2': (98.399,148.060,58.037)
C2: (94.659,151.777,57.915)
N1: (94.163,152.178,56.734)
N3: (95.780,151.100,58.172)
N6: (94.373,152.308,54.437)
N7: (96.978,150.709,54.819)
N9: (97.623,150.142,56.895)
O5': (100.867,149.518,55.223)
O3': (100.072,146.403,57.490)
Image (generated by PyMOL):