Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1217:A1218
Extra
PDB:
ATOM 1 O3' U A1216 57.316 -77.373 3.633 1.00 28.87 O
ATOM 2 P A A1217 56.279 -76.177 3.948 1.00 36.25 P
ATOM 3 OP1 A A1217 56.759 -75.528 5.209 1.00 37.28 O
ATOM 4 OP2 A A1217 54.910 -76.746 3.915 1.00 44.82 O
ATOM 5 O5' A A1217 56.464 -75.178 2.735 1.00 19.02 O
ATOM 6 C5' A A1217 57.263 -74.030 2.895 1.00 28.96 C
ATOM 7 C4' A A1217 57.166 -73.100 1.731 1.00 21.79 C
ATOM 8 O4' A A1217 57.353 -73.829 0.497 1.00 27.71 O
ATOM 9 C3' A A1217 55.842 -72.427 1.544 1.00 25.24 C
ATOM 10 O3' A A1217 55.620 -71.356 2.453 1.00 30.90 O
ATOM 11 C2' A A1217 55.901 -72.013 0.080 1.00 19.85 C
ATOM 12 O2' A A1217 56.713 -70.883 -0.079 1.00 21.73 O
ATOM 13 C1' A A1217 56.629 -73.196 -0.534 1.00 25.57 C
ATOM 14 N9 A A1217 55.702 -74.165 -1.149 1.00 30.84 N
ATOM 15 C8 A A1217 55.245 -75.350 -0.675 1.00 28.07 C
ATOM 16 N7 A A1217 54.432 -75.962 -1.490 1.00 29.31 N
ATOM 17 C5 A A1217 54.346 -75.121 -2.580 1.00 29.42 C
ATOM 18 C6 A A1217 53.658 -75.229 -3.800 1.00 27.62 C
ATOM 19 N6 A A1217 52.857 -76.232 -4.189 1.00 24.66 N
ATOM 20 N1 A A1217 53.854 -74.213 -4.645 1.00 31.89 N
ATOM 21 C2 A A1217 54.660 -73.184 -4.313 1.00 27.88 C
ATOM 22 N3 A A1217 55.350 -72.976 -3.214 1.00 25.93 N
ATOM 23 C4 A A1217 55.138 -74.010 -2.386 1.00 29.90 C
ATOM 24 P A A1218 54.116 -71.039 2.982 1.00 33.27 P
ATOM 25 OP1 A A1218 54.141 -69.697 3.616 1.00 23.11 O
ATOM 26 OP2 A A1218 53.671 -72.218 3.804 1.00 38.18 O
ATOM 27 O5' A A1218 53.277 -70.980 1.630 1.00 26.40 O
TER
ATOM 1 O3' A B1217 55.620 -71.356 2.453 1.00 30.90 O
ATOM 2 P A B1218 54.116 -71.039 2.982 1.00 33.27 P
ATOM 3 OP1 A B1218 54.141 -69.697 3.616 1.00 23.11 O
ATOM 4 OP2 A B1218 53.671 -72.218 3.804 1.00 38.18 O
ATOM 5 O5' A B1218 53.277 -70.980 1.630 1.00 26.40 O
ATOM 6 C5' A B1218 53.323 -69.838 0.788 1.00 25.34 C
ATOM 7 C4' A B1218 52.550 -70.071 -0.489 1.00 27.03 C
ATOM 8 O4' A B1218 52.952 -71.326 -1.065 1.00 32.51 O
ATOM 9 C3' A B1218 51.052 -70.183 -0.346 1.00 24.03 C
ATOM 10 O3' A B1218 50.427 -68.915 -0.385 1.00 32.09 O
ATOM 11 C2' A B1218 50.669 -71.064 -1.514 1.00 27.95 C
ATOM 12 O2' A B1218 50.607 -70.297 -2.691 1.00 38.31 O
ATOM 13 C1' A B1218 51.870 -71.969 -1.640 1.00 23.81 C
ATOM 14 N9 A B1218 51.707 -73.252 -0.962 1.00 32.63 N
ATOM 15 C8 A B1218 52.212 -73.605 0.271 1.00 31.43 C
ATOM 16 N7 A B1218 51.938 -74.844 0.583 1.00 32.10 N
ATOM 17 C5 A B1218 51.247 -75.327 -0.537 1.00 29.19 C
ATOM 18 C6 A B1218 50.690 -76.566 -0.857 1.00 28.68 C
ATOM 19 N6 A B1218 50.723 -77.643 -0.071 1.00 33.01 N
ATOM 20 N1 A B1218 50.070 -76.674 -2.042 1.00 34.55 N
ATOM 21 C2 A B1218 50.007 -75.623 -2.863 1.00 32.99 C
ATOM 22 N3 A B1218 50.493 -74.413 -2.678 1.00 32.08 N
ATOM 23 C4 A B1218 51.107 -74.351 -1.491 1.00 29.99 C
ATOM 24 P C B1219 49.042 -68.649 0.384 1.00 34.77 P
ATOM 25 OP1 C B1219 48.781 -67.205 0.279 1.00 36.07 O
ATOM 26 OP2 C B1219 49.143 -69.268 1.731 1.00 34.64 O
ATOM 27 O5' C B1219 47.996 -69.452 -0.489 1.00 32.04 O
TER
ATOM 2 P A A1217 56.279 -76.177 3.948 1.00 36.25 P
ATOM 3 OP1 A A1217 56.759 -75.528 5.209 1.00 37.28 O
ATOM 4 OP2 A A1217 54.910 -76.746 3.915 1.00 44.82 O
ATOM 5 O5' A A1217 56.464 -75.178 2.735 1.00 19.02 O
ATOM 6 C5' A A1217 57.263 -74.030 2.895 1.00 28.96 C
ATOM 7 C4' A A1217 57.166 -73.100 1.731 1.00 21.79 C
ATOM 8 O4' A A1217 57.353 -73.829 0.497 1.00 27.71 O
ATOM 9 C3' A A1217 55.842 -72.427 1.544 1.00 25.24 C
ATOM 10 O3' A A1217 55.620 -71.356 2.453 1.00 30.90 O
ATOM 11 C2' A A1217 55.901 -72.013 0.080 1.00 19.85 C
ATOM 12 O2' A A1217 56.713 -70.883 -0.079 1.00 21.73 O
ATOM 13 C1' A A1217 56.629 -73.196 -0.534 1.00 25.57 C
ATOM 14 N9 A A1217 55.702 -74.165 -1.149 1.00 30.84 N
ATOM 15 C8 A A1217 55.245 -75.350 -0.675 1.00 28.07 C
ATOM 16 N7 A A1217 54.432 -75.962 -1.490 1.00 29.31 N
ATOM 17 C5 A A1217 54.346 -75.121 -2.580 1.00 29.42 C
ATOM 18 C6 A A1217 53.658 -75.229 -3.800 1.00 27.62 C
ATOM 19 N6 A A1217 52.857 -76.232 -4.189 1.00 24.66 N
ATOM 20 N1 A A1217 53.854 -74.213 -4.645 1.00 31.89 N
ATOM 21 C2 A A1217 54.660 -73.184 -4.313 1.00 27.88 C
ATOM 22 N3 A A1217 55.350 -72.976 -3.214 1.00 25.93 N
ATOM 23 C4 A A1217 55.138 -74.010 -2.386 1.00 29.90 C
ATOM 24 P A A1218 54.116 -71.039 2.982 1.00 33.27 P
ATOM 25 OP1 A A1218 54.141 -69.697 3.616 1.00 23.11 O
ATOM 26 OP2 A A1218 53.671 -72.218 3.804 1.00 38.18 O
ATOM 27 O5' A A1218 53.277 -70.980 1.630 1.00 26.40 O
TER
ATOM 1 O3' A B1217 55.620 -71.356 2.453 1.00 30.90 O
ATOM 2 P A B1218 54.116 -71.039 2.982 1.00 33.27 P
ATOM 3 OP1 A B1218 54.141 -69.697 3.616 1.00 23.11 O
ATOM 4 OP2 A B1218 53.671 -72.218 3.804 1.00 38.18 O
ATOM 5 O5' A B1218 53.277 -70.980 1.630 1.00 26.40 O
ATOM 6 C5' A B1218 53.323 -69.838 0.788 1.00 25.34 C
ATOM 7 C4' A B1218 52.550 -70.071 -0.489 1.00 27.03 C
ATOM 8 O4' A B1218 52.952 -71.326 -1.065 1.00 32.51 O
ATOM 9 C3' A B1218 51.052 -70.183 -0.346 1.00 24.03 C
ATOM 10 O3' A B1218 50.427 -68.915 -0.385 1.00 32.09 O
ATOM 11 C2' A B1218 50.669 -71.064 -1.514 1.00 27.95 C
ATOM 12 O2' A B1218 50.607 -70.297 -2.691 1.00 38.31 O
ATOM 13 C1' A B1218 51.870 -71.969 -1.640 1.00 23.81 C
ATOM 14 N9 A B1218 51.707 -73.252 -0.962 1.00 32.63 N
ATOM 15 C8 A B1218 52.212 -73.605 0.271 1.00 31.43 C
ATOM 16 N7 A B1218 51.938 -74.844 0.583 1.00 32.10 N
ATOM 17 C5 A B1218 51.247 -75.327 -0.537 1.00 29.19 C
ATOM 18 C6 A B1218 50.690 -76.566 -0.857 1.00 28.68 C
ATOM 19 N6 A B1218 50.723 -77.643 -0.071 1.00 33.01 N
ATOM 20 N1 A B1218 50.070 -76.674 -2.042 1.00 34.55 N
ATOM 21 C2 A B1218 50.007 -75.623 -2.863 1.00 32.99 C
ATOM 22 N3 A B1218 50.493 -74.413 -2.678 1.00 32.08 N
ATOM 23 C4 A B1218 51.107 -74.351 -1.491 1.00 29.99 C
ATOM 24 P C B1219 49.042 -68.649 0.384 1.00 34.77 P
ATOM 25 OP1 C B1219 48.781 -67.205 0.279 1.00 36.07 O
ATOM 26 OP2 C B1219 49.143 -69.268 1.731 1.00 34.64 O
ATOM 27 O5' C B1219 47.996 -69.452 -0.489 1.00 32.04 O
TER
Atoms:
OP1: (56.759,-75.528,5.209)
OP2: (54.910,-76.746,3.915)
C3': (55.842,-72.427,1.544)
C1': (56.629,-73.196,-0.534)
C5': (57.263,-74.030,2.895)
O4': (57.353,-73.829,0.497)
C8: (55.245,-75.350,-0.675)
O2': (56.713,-70.883,-0.079)
C6: (53.658,-75.229,-3.800)
C5: (54.346,-75.121,-2.580)
C4: (55.138,-74.010,-2.386)
P: (56.279,-76.177,3.948)
C4': (57.166,-73.100,1.731)
C2': (55.901,-72.013,0.080)
C2: (54.660,-73.184,-4.313)
N1: (53.854,-74.213,-4.645)
N3: (55.350,-72.976,-3.214)
N6: (52.857,-76.232,-4.189)
N7: (54.432,-75.962,-1.490)
N9: (55.702,-74.165,-1.149)
O5': (56.464,-75.178,2.735)
O3': (55.620,-71.356,2.453)
OP2: (54.910,-76.746,3.915)
C3': (55.842,-72.427,1.544)
C1': (56.629,-73.196,-0.534)
C5': (57.263,-74.030,2.895)
O4': (57.353,-73.829,0.497)
C8: (55.245,-75.350,-0.675)
O2': (56.713,-70.883,-0.079)
C6: (53.658,-75.229,-3.800)
C5: (54.346,-75.121,-2.580)
C4: (55.138,-74.010,-2.386)
P: (56.279,-76.177,3.948)
C4': (57.166,-73.100,1.731)
C2': (55.901,-72.013,0.080)
C2: (54.660,-73.184,-4.313)
N1: (53.854,-74.213,-4.645)
N3: (55.350,-72.976,-3.214)
N6: (52.857,-76.232,-4.189)
N7: (54.432,-75.962,-1.490)
N9: (55.702,-74.165,-1.149)
O5': (56.464,-75.178,2.735)
O3': (55.620,-71.356,2.453)
OP1: (54.141,-69.697,3.616)
OP2: (53.671,-72.218,3.804)
C3': (51.052,-70.183,-0.346)
C1': (51.870,-71.969,-1.640)
C5': (53.323,-69.838,0.788)
O4': (52.952,-71.326,-1.065)
C8: (52.212,-73.605,0.271)
O2': (50.607,-70.297,-2.691)
C6: (50.690,-76.566,-0.857)
C5: (51.247,-75.327,-0.537)
C4: (51.107,-74.351,-1.491)
P: (54.116,-71.039,2.982)
C4': (52.550,-70.071,-0.489)
C2': (50.669,-71.064,-1.514)
C2: (50.007,-75.623,-2.863)
N1: (50.070,-76.674,-2.042)
N3: (50.493,-74.413,-2.678)
N6: (50.723,-77.643,-0.071)
N7: (51.938,-74.844,0.583)
N9: (51.707,-73.252,-0.962)
O5': (53.277,-70.980,1.630)
O3': (50.427,-68.915,-0.385)
OP2: (53.671,-72.218,3.804)
C3': (51.052,-70.183,-0.346)
C1': (51.870,-71.969,-1.640)
C5': (53.323,-69.838,0.788)
O4': (52.952,-71.326,-1.065)
C8: (52.212,-73.605,0.271)
O2': (50.607,-70.297,-2.691)
C6: (50.690,-76.566,-0.857)
C5: (51.247,-75.327,-0.537)
C4: (51.107,-74.351,-1.491)
P: (54.116,-71.039,2.982)
C4': (52.550,-70.071,-0.489)
C2': (50.669,-71.064,-1.514)
C2: (50.007,-75.623,-2.863)
N1: (50.070,-76.674,-2.042)
N3: (50.493,-74.413,-2.678)
N6: (50.723,-77.643,-0.071)
N7: (51.938,-74.844,0.583)
N9: (51.707,-73.252,-0.962)
O5': (53.277,-70.980,1.630)
O3': (50.427,-68.915,-0.385)
Image (generated by PyMOL):