ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:057:059

Extra

PDB:
ATOM 1 O3' G A 56 60.394 158.806 29.292 1.00 46.60 O
ATOM 2 P A A 57 60.196 159.853 28.081 1.00 46.84 P
ATOM 3 OP1 A A 57 59.286 159.230 27.075 1.00 47.45 O
ATOM 4 OP2 A A 57 61.532 160.333 27.669 1.00 44.11 O
ATOM 5 O5' A A 57 59.413 161.078 28.737 1.00 45.62 O
ATOM 6 C5' A A 57 59.863 161.671 29.973 1.00 46.08 C
ATOM 7 C4' A A 57 60.272 163.114 29.754 1.00 46.58 C
ATOM 8 O4' A A 57 60.719 163.675 31.022 1.00 46.37 O
ATOM 9 C3' A A 57 61.437 163.311 28.788 1.00 46.07 C
ATOM 10 O3' A A 57 61.336 164.600 28.178 1.00 45.29 O
ATOM 11 C2' A A 57 62.634 163.257 29.727 1.00 46.14 C
ATOM 12 O2' A A 57 63.793 163.876 29.218 1.00 49.32 O
ATOM 13 C1' A A 57 62.092 164.012 30.938 1.00 46.88 C
ATOM 14 N9 A A 57 62.732 163.631 32.197 1.00 48.63 N
ATOM 15 C8 A A 57 63.342 164.455 33.111 1.00 48.74 C
ATOM 16 N7 A A 57 63.815 163.824 34.160 1.00 49.25 N
ATOM 17 C5 A A 57 63.502 162.493 33.918 1.00 48.53 C
ATOM 18 C6 A A 57 63.736 161.315 34.650 1.00 47.93 C
ATOM 19 N6 A A 57 64.368 161.282 35.824 1.00 45.87 N
ATOM 20 N1 A A 57 63.293 160.155 34.125 1.00 47.70 N
ATOM 21 C2 A A 57 62.660 160.184 32.949 1.00 47.30 C
ATOM 22 N3 A A 57 62.381 161.220 32.169 1.00 47.21 N
ATOM 23 C4 A A 57 62.835 162.360 32.714 1.00 48.39 C
ATOM 24 P U A 58 61.193 164.732 26.577 1.00 44.52 P
ATOM 25 OP1 U A 58 62.146 163.795 25.933 1.00 41.77 O
ATOM 26 OP2 U A 58 61.266 166.175 26.264 1.00 45.67 O
ATOM 27 O5' U A 58 59.692 164.273 26.281 1.00 44.43 O
TER

ATOM 1 O3' U B 58 55.464 163.215 27.080 1.00 45.96 O
ATOM 2 P A B 59 54.672 163.678 28.399 1.00 48.15 P
ATOM 3 OP1 A B 59 53.310 164.128 27.999 1.00 46.15 O
ATOM 4 OP2 A B 59 55.542 164.593 29.179 1.00 47.27 O
ATOM 5 O5' A B 59 54.477 162.314 29.203 1.00 49.23 O
ATOM 6 C5' A B 59 55.599 161.479 29.447 1.00 46.63 C
ATOM 7 C4' A B 59 55.245 160.305 30.319 1.00 44.42 C
ATOM 8 O4' A B 59 56.543 159.798 30.727 1.00 45.31 O
ATOM 9 C3' A B 59 54.486 160.592 31.621 1.00 44.20 C
ATOM 10 O3' A B 59 53.122 160.175 31.526 1.00 42.66 O
ATOM 11 C2' A B 59 55.233 159.748 32.645 1.00 45.20 C
ATOM 12 O2' A B 59 54.864 158.386 32.590 1.00 41.36 O
ATOM 13 C1' A B 59 56.663 159.869 32.129 1.00 46.25 C
ATOM 14 N9 A B 59 57.325 161.131 32.482 1.00 48.06 N
ATOM 15 C8 A B 59 57.045 162.406 32.047 1.00 45.40 C
ATOM 16 N7 A B 59 57.802 163.327 32.588 1.00 46.59 N
ATOM 17 C5 A B 59 58.646 162.616 33.432 1.00 47.16 C
ATOM 18 C6 A B 59 59.681 163.016 34.300 1.00 46.75 C
ATOM 19 N6 A B 59 60.053 164.283 34.485 1.00 44.29 N
ATOM 20 N1 A B 59 60.329 162.052 34.987 1.00 48.94 N
ATOM 21 C2 A B 59 59.957 160.778 34.815 1.00 47.50 C
ATOM 22 N3 A B 59 59.002 160.279 34.037 1.00 48.39 N
ATOM 23 C4 A B 59 58.374 161.261 33.365 1.00 48.08 C
ATOM 24 P A B 60 52.064 160.547 32.692 1.00 45.48 P
ATOM 25 OP1 A B 60 51.392 161.826 32.345 1.00 44.84 O
ATOM 26 OP2 A B 60 52.712 160.410 34.022 1.00 45.51 O
ATOM 27 O5' A B 60 50.995 159.370 32.577 1.00 43.40 O
TER

Atoms:
OP1: (59.286,159.230,27.075)
OP2: (61.532,160.333,27.669)
C3': (61.437,163.311,28.788)
C1': (62.092,164.012,30.938)
C5': (59.863,161.671,29.973)
O4': (60.719,163.675,31.022)
C8: (63.342,164.455,33.111)
O2': (63.793,163.876,29.218)
C6: (63.736,161.315,34.650)
C5: (63.502,162.493,33.918)
C4: (62.835,162.360,32.714)
P: (60.196,159.853,28.081)
C4': (60.272,163.114,29.754)
C2': (62.634,163.257,29.727)
C2: (62.660,160.184,32.949)
N1: (63.293,160.155,34.125)
N3: (62.381,161.220,32.169)
N6: (64.368,161.282,35.824)
N7: (63.815,163.824,34.160)
N9: (62.732,163.631,32.197)
O5': (59.413,161.078,28.737)
O3': (61.336,164.600,28.178)
OP1: (53.310,164.128,27.999)
OP2: (55.542,164.593,29.179)
C3': (54.486,160.592,31.621)
C1': (56.663,159.869,32.129)
C5': (55.599,161.479,29.447)
O4': (56.543,159.798,30.727)
C8: (57.045,162.406,32.047)
O2': (54.864,158.386,32.590)
C6: (59.681,163.016,34.300)
C5: (58.646,162.616,33.432)
C4: (58.374,161.261,33.365)
P: (54.672,163.678,28.399)
C4': (55.245,160.305,30.319)
C2': (55.233,159.748,32.645)
C2: (59.957,160.778,34.815)
N1: (60.329,162.052,34.987)
N3: (59.002,160.279,34.037)
N6: (60.053,164.283,34.485)
N7: (57.802,163.327,32.588)
N9: (57.325,161.131,32.482)
O5': (54.477,162.314,29.203)
O3': (53.122,160.175,31.526)
Image (generated by PyMOL):
PyMOL image
show in jmol