ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A605:A606

Extra

PDB:
ATOM 1 O3' G A 604 -3.187 47.036 89.860 1.00 23.94 O
ATOM 2 P A A 605 -4.379 45.991 89.700 1.00 22.06 P
ATOM 3 OP1 A A 605 -4.351 45.500 88.299 1.00 22.06 O
ATOM 4 OP2 A A 605 -5.604 46.657 90.189 1.00 22.06 O
ATOM 5 O5' A A 605 -3.949 44.827 90.694 1.00 22.06 O
ATOM 6 C5' A A 605 -3.019 43.837 90.295 1.00 22.06 C
ATOM 7 C4' A A 605 -3.344 42.507 90.916 1.00 22.06 C
ATOM 8 O4' A A 605 -3.569 42.685 92.339 1.00 22.06 O
ATOM 9 C3' A A 605 -4.613 41.826 90.408 1.00 22.06 C
ATOM 10 O3' A A 605 -4.404 41.071 89.229 1.00 22.06 O
ATOM 11 C2' A A 605 -5.055 40.982 91.596 1.00 22.06 C
ATOM 12 O2' A A 605 -4.341 39.750 91.646 1.00 22.06 O
ATOM 13 C1' A A 605 -4.629 41.858 92.775 1.00 22.06 C
ATOM 14 N9 A A 605 -5.730 42.718 93.250 1.00 21.74 N
ATOM 15 C8 A A 605 -5.871 44.080 93.185 1.00 21.74 C
ATOM 16 N7 A A 605 -6.981 44.520 93.718 1.00 21.74 N
ATOM 17 C5 A A 605 -7.614 43.375 94.168 1.00 21.74 C
ATOM 18 C6 A A 605 -8.838 43.145 94.834 1.00 21.74 C
ATOM 19 N6 A A 605 -9.717 44.082 95.205 1.00 21.74 N
ATOM 20 N1 A A 605 -9.146 41.868 95.124 1.00 21.74 N
ATOM 21 C2 A A 605 -8.273 40.921 94.778 1.00 21.74 C
ATOM 22 N3 A A 605 -7.105 41.013 94.153 1.00 21.74 N
ATOM 23 C4 A A 605 -6.842 42.275 93.879 1.00 21.74 C
ATOM 24 P A A 606 -5.594 40.902 88.165 1.00 16.38 P
ATOM 25 OP1 A A 606 -5.076 40.084 87.043 1.00 16.38 O
ATOM 26 OP2 A A 606 -6.096 42.248 87.875 1.00 16.38 O
ATOM 27 O5' A A 606 -6.678 40.074 88.974 1.00 16.38 O
TER

ATOM 1 O3' A B 605 -4.404 41.071 89.229 1.00 22.06 O
ATOM 2 P A B 606 -5.594 40.902 88.165 1.00 16.38 P
ATOM 3 OP1 A B 606 -5.076 40.084 87.043 1.00 16.38 O
ATOM 4 OP2 A B 606 -6.096 42.248 87.875 1.00 16.38 O
ATOM 5 O5' A B 606 -6.678 40.074 88.974 1.00 16.38 O
ATOM 6 C5' A B 606 -6.590 38.670 89.015 1.00 16.38 C
ATOM 7 C4' A B 606 -7.548 38.084 90.000 1.00 16.38 C
ATOM 8 O4' A B 606 -7.405 38.751 91.278 1.00 16.38 O
ATOM 9 C3' A B 606 -9.021 38.243 89.678 1.00 16.38 C
ATOM 10 O3' A B 606 -9.481 37.326 88.740 1.00 16.38 O
ATOM 11 C2' A B 606 -9.652 38.068 91.028 1.00 16.38 C
ATOM 12 O2' A B 606 -9.604 36.704 91.425 1.00 16.38 O
ATOM 13 C1' A B 606 -8.677 38.879 91.875 1.00 16.38 C
ATOM 14 N9 A B 606 -9.036 40.297 91.847 1.00 16.51 N
ATOM 15 C8 A B 606 -8.389 41.293 91.176 1.00 16.51 C
ATOM 16 N7 A B 606 -8.977 42.443 91.325 1.00 16.51 N
ATOM 17 C5 A B 606 -10.091 42.175 92.112 1.00 16.51 C
ATOM 18 C6 A B 606 -11.118 42.992 92.619 1.00 16.51 C
ATOM 19 N6 A B 606 -11.232 44.306 92.406 1.00 16.51 N
ATOM 20 N1 A B 606 -12.049 42.396 93.379 1.00 16.51 N
ATOM 21 C2 A B 606 -11.937 41.071 93.591 1.00 16.51 C
ATOM 22 N3 A B 606 -11.032 40.200 93.160 1.00 16.51 N
ATOM 23 C4 A B 606 -10.136 40.840 92.422 1.00 16.51 C
ATOM 24 P A B 607 -10.055 37.861 87.365 1.00 26.51 P
ATOM 25 OP1 A B 607 -9.999 36.740 86.408 1.00 26.51 O
ATOM 26 OP2 A B 607 -9.308 39.098 87.055 1.00 26.51 O
ATOM 27 O5' A B 607 -11.577 38.208 87.719 1.00 26.51 O
TER

Atoms:
OP1: (-4.351,45.500,88.299)
OP2: (-5.604,46.657,90.189)
C3': (-4.613,41.826,90.408)
C1': (-4.629,41.858,92.775)
C5': (-3.019,43.837,90.295)
O4': (-3.569,42.685,92.339)
C8: (-5.871,44.080,93.185)
O2': (-4.341,39.750,91.646)
C6: (-8.838,43.145,94.834)
C5: (-7.614,43.375,94.168)
C4: (-6.842,42.275,93.879)
P: (-4.379,45.991,89.700)
C4': (-3.344,42.507,90.916)
C2': (-5.055,40.982,91.596)
C2: (-8.273,40.921,94.778)
N1: (-9.146,41.868,95.124)
N3: (-7.105,41.013,94.153)
N6: (-9.717,44.082,95.205)
N7: (-6.981,44.520,93.718)
N9: (-5.730,42.718,93.250)
O5': (-3.949,44.827,90.694)
O3': (-4.404,41.071,89.229)
OP1: (-5.076,40.084,87.043)
OP2: (-6.096,42.248,87.875)
C3': (-9.021,38.243,89.678)
C1': (-8.677,38.879,91.875)
C5': (-6.590,38.670,89.015)
O4': (-7.405,38.751,91.278)
C8: (-8.389,41.293,91.176)
O2': (-9.604,36.704,91.425)
C6: (-11.118,42.992,92.619)
C5: (-10.091,42.175,92.112)
C4: (-10.136,40.840,92.422)
P: (-5.594,40.902,88.165)
C4': (-7.548,38.084,90.000)
C2': (-9.652,38.068,91.028)
C2: (-11.937,41.071,93.591)
N1: (-12.049,42.396,93.379)
N3: (-11.032,40.200,93.160)
N6: (-11.232,44.306,92.406)
N7: (-8.977,42.443,91.325)
N9: (-9.036,40.297,91.847)
O5': (-6.678,40.074,88.974)
O3': (-9.481,37.326,88.740)
Image (generated by PyMOL):
PyMOL image
show in jmol