ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G9C:R122:R123

Extra

PDB:
ATOM 1 O3' C A 121 24.539 -22.863 58.697 1.00 61.95 O
ATOM 2 P A A 122 24.399 -21.302 59.021 1.00 61.05 P
ATOM 3 OP1 A A 122 24.873 -20.558 57.831 1.00 60.91 O
ATOM 4 OP2 A A 122 24.988 -21.031 60.355 1.00 60.94 O
ATOM 5 O5' A A 122 22.814 -21.122 59.116 1.00 59.31 O
ATOM 6 C5' A A 122 22.261 -19.890 59.543 1.00 56.80 C
ATOM 7 C4' A A 122 20.884 -19.723 58.938 1.00 54.49 C
ATOM 8 O4' A A 122 19.920 -20.425 59.759 1.00 53.41 O
ATOM 9 C3' A A 122 20.402 -18.285 58.857 1.00 53.39 C
ATOM 10 O3' A A 122 20.773 -17.738 57.594 1.00 52.93 O
ATOM 11 C2' A A 122 18.889 -18.431 59.004 1.00 52.85 C
ATOM 12 O2' A A 122 18.228 -18.653 57.771 1.00 52.54 O
ATOM 13 C1' A A 122 18.745 -19.654 59.905 1.00 52.27 C
ATOM 14 N9 A A 122 18.556 -19.373 61.327 1.00 50.87 N
ATOM 15 C8 A A 122 19.521 -19.288 62.292 1.00 50.46 C
ATOM 16 N7 A A 122 19.056 -19.035 63.494 1.00 49.89 N
ATOM 17 C5 A A 122 17.690 -18.951 63.306 1.00 49.66 C
ATOM 18 C6 A A 122 16.621 -18.707 64.192 1.00 49.35 C
ATOM 19 N6 A A 122 16.785 -18.486 65.500 1.00 49.61 N
ATOM 20 N1 A A 122 15.370 -18.691 63.682 1.00 49.23 N
ATOM 21 C2 A A 122 15.205 -18.910 62.371 1.00 49.69 C
ATOM 22 N3 A A 122 16.132 -19.153 61.444 1.00 50.07 N
ATOM 23 C4 A A 122 17.365 -19.160 61.978 1.00 50.12 C
ATOM 24 P A A 123 21.198 -16.198 57.441 1.00 52.90 P
ATOM 25 OP1 A A 123 21.695 -16.006 56.059 1.00 52.44 O
ATOM 26 OP2 A A 123 22.061 -15.835 58.590 1.00 52.65 O
ATOM 27 O5' A A 123 19.798 -15.431 57.575 1.00 52.18 O
TER

ATOM 1 O3' A B 122 20.773 -17.738 57.594 1.00 52.93 O
ATOM 2 P A B 123 21.198 -16.198 57.441 1.00 52.90 P
ATOM 3 OP1 A B 123 21.695 -16.006 56.059 1.00 52.44 O
ATOM 4 OP2 A B 123 22.061 -15.835 58.590 1.00 52.65 O
ATOM 5 O5' A B 123 19.798 -15.431 57.575 1.00 52.18 O
ATOM 6 C5' A B 123 18.828 -15.498 56.526 1.00 51.58 C
ATOM 7 C4' A B 123 17.449 -15.091 57.014 1.00 51.01 C
ATOM 8 O4' A B 123 17.003 -16.000 58.051 1.00 50.46 O
ATOM 9 C3' A B 123 17.382 -13.744 57.710 1.00 51.20 C
ATOM 10 O3' A B 123 17.354 -12.666 56.788 1.00 52.28 O
ATOM 11 C2' A B 123 16.086 -13.884 58.500 1.00 50.12 C
ATOM 12 O2' A B 123 14.927 -13.759 57.701 1.00 50.22 O
ATOM 13 C1' A B 123 16.221 -15.306 59.010 1.00 49.30 C
ATOM 14 N9 A B 123 16.842 -15.380 60.333 1.00 48.10 N
ATOM 15 C8 A B 123 18.177 -15.411 60.630 1.00 47.73 C
ATOM 16 N7 A B 123 18.443 -15.479 61.912 1.00 47.21 N
ATOM 17 C5 A B 123 17.195 -15.490 62.503 1.00 47.19 C
ATOM 18 C6 A B 123 16.781 -15.550 63.849 1.00 47.15 C
ATOM 19 N6 A B 123 17.636 -15.616 64.874 1.00 47.02 N
ATOM 20 N1 A B 123 15.452 -15.545 64.107 1.00 47.07 N
ATOM 21 C2 A B 123 14.592 -15.482 63.082 1.00 46.71 C
ATOM 22 N3 A B 123 14.865 -15.424 61.779 1.00 47.25 N
ATOM 23 C4 A B 123 16.194 -15.429 61.548 1.00 47.58 C
ATOM 24 P A B 124 17.841 -11.227 57.284 1.00 52.85 P
ATOM 25 OP1 A B 124 17.953 -10.357 56.090 1.00 53.15 O
ATOM 26 OP2 A B 124 19.003 -11.418 58.180 1.00 52.94 O
ATOM 27 O5' A B 124 16.615 -10.703 58.165 1.00 53.87 O
TER

Atoms:
OP1: (24.873,-20.558,57.831)
OP2: (24.988,-21.031,60.355)
C3': (20.402,-18.285,58.857)
C1': (18.745,-19.654,59.905)
C5': (22.261,-19.890,59.543)
O4': (19.920,-20.425,59.759)
C8: (19.521,-19.288,62.292)
O2': (18.228,-18.653,57.771)
C6: (16.621,-18.707,64.192)
C5: (17.690,-18.951,63.306)
C4: (17.365,-19.160,61.978)
P: (24.399,-21.302,59.021)
C4': (20.884,-19.723,58.938)
C2': (18.889,-18.431,59.004)
C2: (15.205,-18.910,62.371)
N1: (15.370,-18.691,63.682)
N3: (16.132,-19.153,61.444)
N6: (16.785,-18.486,65.500)
N7: (19.056,-19.035,63.494)
N9: (18.556,-19.373,61.327)
O5': (22.814,-21.122,59.116)
O3': (20.773,-17.738,57.594)
OP1: (21.695,-16.006,56.059)
OP2: (22.061,-15.835,58.590)
C3': (17.382,-13.744,57.710)
C1': (16.221,-15.306,59.010)
C5': (18.828,-15.498,56.526)
O4': (17.003,-16.000,58.051)
C8: (18.177,-15.411,60.630)
O2': (14.927,-13.759,57.701)
C6: (16.781,-15.550,63.849)
C5: (17.195,-15.490,62.503)
C4: (16.194,-15.429,61.548)
P: (21.198,-16.198,57.441)
C4': (17.449,-15.091,57.014)
C2': (16.086,-13.884,58.500)
C2: (14.592,-15.482,63.082)
N1: (15.452,-15.545,64.107)
N3: (14.865,-15.424,61.779)
N6: (17.636,-15.616,64.874)
N7: (18.443,-15.479,61.912)
N9: (16.842,-15.380,60.333)
O5': (19.798,-15.431,57.575)
O3': (17.354,-12.666,56.788)
Image (generated by PyMOL):
PyMOL image
show in jmol