Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1505:A1506
Extra
PDB:
ATOM 1 O3' U A1504 -87.011 27.199 6.768 1.00 6.54 O
ATOM 2 P A A1505 -86.702 28.709 6.343 1.00 0.24 P
ATOM 3 OP1 A A1505 -85.273 28.954 6.654 1.00 0.24 O
ATOM 4 OP2 A A1505 -87.720 29.552 6.998 1.00 0.24 O
ATOM 5 O5' A A1505 -86.913 28.717 4.755 1.00 0.24 O
ATOM 6 C5' A A1505 -85.777 28.692 3.909 1.00 0.24 C
ATOM 7 C4' A A1505 -86.061 29.141 2.497 1.00 0.24 C
ATOM 8 O4' A A1505 -85.691 30.542 2.357 1.00 0.24 O
ATOM 9 C3' A A1505 -85.222 28.423 1.442 1.00 0.24 C
ATOM 10 O3' A A1505 -85.818 27.240 0.958 1.00 0.24 O
ATOM 11 C2' A A1505 -84.962 29.477 0.381 1.00 0.24 C
ATOM 12 O2' A A1505 -86.084 29.627 -0.467 1.00 0.24 O
ATOM 13 C1' A A1505 -84.829 30.718 1.247 1.00 0.24 C
ATOM 14 N9 A A1505 -83.439 30.895 1.753 1.00 0.06 N
ATOM 15 C8 A A1505 -83.032 30.744 3.054 1.00 0.06 C
ATOM 16 N7 A A1505 -81.756 30.943 3.251 1.00 0.06 N
ATOM 17 C5 A A1505 -81.263 31.262 2.009 1.00 0.06 C
ATOM 18 C6 A A1505 -79.968 31.587 1.585 1.00 0.06 C
ATOM 19 N6 A A1505 -78.900 31.630 2.358 1.00 0.06 N
ATOM 20 N1 A A1505 -79.794 31.872 0.298 1.00 0.06 N
ATOM 21 C2 A A1505 -80.866 31.814 -0.507 1.00 0.06 C
ATOM 22 N3 A A1505 -82.140 31.507 -0.231 1.00 0.06 N
ATOM 23 C4 A A1505 -82.283 31.237 1.075 1.00 0.06 C
ATOM 24 P A A1506 -84.897 25.970 0.700 1.00 7.62 P
ATOM 25 OP1 A A1506 -85.790 24.800 0.504 1.00 7.62 O
ATOM 26 OP2 A A1506 -83.899 25.936 1.801 1.00 7.62 O
ATOM 27 O5' A A1506 -84.194 26.353 -0.668 1.00 7.62 O
TER
ATOM 1 O3' A B1505 -85.818 27.240 0.958 1.00 0.24 O
ATOM 2 P A B1506 -84.897 25.970 0.700 1.00 7.62 P
ATOM 3 OP1 A B1506 -85.790 24.800 0.504 1.00 7.62 O
ATOM 4 OP2 A B1506 -83.899 25.936 1.801 1.00 7.62 O
ATOM 5 O5' A B1506 -84.194 26.353 -0.668 1.00 7.62 O
ATOM 6 C5' A B1506 -84.951 26.876 -1.736 1.00 7.62 C
ATOM 7 C4' A B1506 -84.067 27.296 -2.876 1.00 7.62 C
ATOM 8 O4' A B1506 -83.400 28.538 -2.548 1.00 7.62 O
ATOM 9 C3' A B1506 -82.931 26.345 -3.224 1.00 7.62 C
ATOM 10 O3' A B1506 -83.356 25.268 -4.043 1.00 7.62 O
ATOM 11 C2' A B1506 -81.933 27.271 -3.898 1.00 7.62 C
ATOM 12 O2' A B1506 -82.344 27.578 -5.224 1.00 7.62 O
ATOM 13 C1' A B1506 -82.078 28.521 -3.041 1.00 7.62 C
ATOM 14 N9 A B1506 -81.186 28.484 -1.887 1.00 7.61 N
ATOM 15 C8 A B1506 -81.559 27.957 -0.691 1.00 7.61 C
ATOM 16 N7 A B1506 -80.616 28.022 0.206 1.00 7.61 N
ATOM 17 C5 A B1506 -79.555 28.632 -0.456 1.00 7.61 C
ATOM 18 C6 A B1506 -78.262 28.992 -0.032 1.00 7.61 C
ATOM 19 N6 A B1506 -77.848 28.735 1.215 1.00 7.61 N
ATOM 20 N1 A B1506 -77.428 29.604 -0.899 1.00 7.61 N
ATOM 21 C2 A B1506 -77.904 29.828 -2.115 1.00 7.61 C
ATOM 22 N3 A B1506 -79.107 29.541 -2.630 1.00 7.61 N
ATOM 23 C4 A B1506 -79.901 28.933 -1.746 1.00 7.61 C
ATOM 24 P C B1507 -82.366 24.052 -4.381 1.00 0.04 P
ATOM 25 OP1 C B1507 -82.980 23.303 -5.530 1.00 0.04 O
ATOM 26 OP2 C B1507 -82.100 23.332 -3.106 1.00 0.04 O
ATOM 27 O5' C B1507 -81.051 24.792 -4.863 1.00 0.04 O
TER
ATOM 2 P A A1505 -86.702 28.709 6.343 1.00 0.24 P
ATOM 3 OP1 A A1505 -85.273 28.954 6.654 1.00 0.24 O
ATOM 4 OP2 A A1505 -87.720 29.552 6.998 1.00 0.24 O
ATOM 5 O5' A A1505 -86.913 28.717 4.755 1.00 0.24 O
ATOM 6 C5' A A1505 -85.777 28.692 3.909 1.00 0.24 C
ATOM 7 C4' A A1505 -86.061 29.141 2.497 1.00 0.24 C
ATOM 8 O4' A A1505 -85.691 30.542 2.357 1.00 0.24 O
ATOM 9 C3' A A1505 -85.222 28.423 1.442 1.00 0.24 C
ATOM 10 O3' A A1505 -85.818 27.240 0.958 1.00 0.24 O
ATOM 11 C2' A A1505 -84.962 29.477 0.381 1.00 0.24 C
ATOM 12 O2' A A1505 -86.084 29.627 -0.467 1.00 0.24 O
ATOM 13 C1' A A1505 -84.829 30.718 1.247 1.00 0.24 C
ATOM 14 N9 A A1505 -83.439 30.895 1.753 1.00 0.06 N
ATOM 15 C8 A A1505 -83.032 30.744 3.054 1.00 0.06 C
ATOM 16 N7 A A1505 -81.756 30.943 3.251 1.00 0.06 N
ATOM 17 C5 A A1505 -81.263 31.262 2.009 1.00 0.06 C
ATOM 18 C6 A A1505 -79.968 31.587 1.585 1.00 0.06 C
ATOM 19 N6 A A1505 -78.900 31.630 2.358 1.00 0.06 N
ATOM 20 N1 A A1505 -79.794 31.872 0.298 1.00 0.06 N
ATOM 21 C2 A A1505 -80.866 31.814 -0.507 1.00 0.06 C
ATOM 22 N3 A A1505 -82.140 31.507 -0.231 1.00 0.06 N
ATOM 23 C4 A A1505 -82.283 31.237 1.075 1.00 0.06 C
ATOM 24 P A A1506 -84.897 25.970 0.700 1.00 7.62 P
ATOM 25 OP1 A A1506 -85.790 24.800 0.504 1.00 7.62 O
ATOM 26 OP2 A A1506 -83.899 25.936 1.801 1.00 7.62 O
ATOM 27 O5' A A1506 -84.194 26.353 -0.668 1.00 7.62 O
TER
ATOM 1 O3' A B1505 -85.818 27.240 0.958 1.00 0.24 O
ATOM 2 P A B1506 -84.897 25.970 0.700 1.00 7.62 P
ATOM 3 OP1 A B1506 -85.790 24.800 0.504 1.00 7.62 O
ATOM 4 OP2 A B1506 -83.899 25.936 1.801 1.00 7.62 O
ATOM 5 O5' A B1506 -84.194 26.353 -0.668 1.00 7.62 O
ATOM 6 C5' A B1506 -84.951 26.876 -1.736 1.00 7.62 C
ATOM 7 C4' A B1506 -84.067 27.296 -2.876 1.00 7.62 C
ATOM 8 O4' A B1506 -83.400 28.538 -2.548 1.00 7.62 O
ATOM 9 C3' A B1506 -82.931 26.345 -3.224 1.00 7.62 C
ATOM 10 O3' A B1506 -83.356 25.268 -4.043 1.00 7.62 O
ATOM 11 C2' A B1506 -81.933 27.271 -3.898 1.00 7.62 C
ATOM 12 O2' A B1506 -82.344 27.578 -5.224 1.00 7.62 O
ATOM 13 C1' A B1506 -82.078 28.521 -3.041 1.00 7.62 C
ATOM 14 N9 A B1506 -81.186 28.484 -1.887 1.00 7.61 N
ATOM 15 C8 A B1506 -81.559 27.957 -0.691 1.00 7.61 C
ATOM 16 N7 A B1506 -80.616 28.022 0.206 1.00 7.61 N
ATOM 17 C5 A B1506 -79.555 28.632 -0.456 1.00 7.61 C
ATOM 18 C6 A B1506 -78.262 28.992 -0.032 1.00 7.61 C
ATOM 19 N6 A B1506 -77.848 28.735 1.215 1.00 7.61 N
ATOM 20 N1 A B1506 -77.428 29.604 -0.899 1.00 7.61 N
ATOM 21 C2 A B1506 -77.904 29.828 -2.115 1.00 7.61 C
ATOM 22 N3 A B1506 -79.107 29.541 -2.630 1.00 7.61 N
ATOM 23 C4 A B1506 -79.901 28.933 -1.746 1.00 7.61 C
ATOM 24 P C B1507 -82.366 24.052 -4.381 1.00 0.04 P
ATOM 25 OP1 C B1507 -82.980 23.303 -5.530 1.00 0.04 O
ATOM 26 OP2 C B1507 -82.100 23.332 -3.106 1.00 0.04 O
ATOM 27 O5' C B1507 -81.051 24.792 -4.863 1.00 0.04 O
TER
Atoms:
OP1: (-85.273,28.954,6.654)
OP2: (-87.720,29.552,6.998)
C3': (-85.222,28.423,1.442)
C1': (-84.829,30.718,1.247)
C5': (-85.777,28.692,3.909)
O4': (-85.691,30.542,2.357)
C8: (-83.032,30.744,3.054)
O2': (-86.084,29.627,-0.467)
C6: (-79.968,31.587,1.585)
C5: (-81.263,31.262,2.009)
C4: (-82.283,31.237,1.075)
P: (-86.702,28.709,6.343)
C4': (-86.061,29.141,2.497)
C2': (-84.962,29.477,0.381)
C2: (-80.866,31.814,-0.507)
N1: (-79.794,31.872,0.298)
N3: (-82.140,31.507,-0.231)
N6: (-78.900,31.630,2.358)
N7: (-81.756,30.943,3.251)
N9: (-83.439,30.895,1.753)
O5': (-86.913,28.717,4.755)
O3': (-85.818,27.240,0.958)
OP2: (-87.720,29.552,6.998)
C3': (-85.222,28.423,1.442)
C1': (-84.829,30.718,1.247)
C5': (-85.777,28.692,3.909)
O4': (-85.691,30.542,2.357)
C8: (-83.032,30.744,3.054)
O2': (-86.084,29.627,-0.467)
C6: (-79.968,31.587,1.585)
C5: (-81.263,31.262,2.009)
C4: (-82.283,31.237,1.075)
P: (-86.702,28.709,6.343)
C4': (-86.061,29.141,2.497)
C2': (-84.962,29.477,0.381)
C2: (-80.866,31.814,-0.507)
N1: (-79.794,31.872,0.298)
N3: (-82.140,31.507,-0.231)
N6: (-78.900,31.630,2.358)
N7: (-81.756,30.943,3.251)
N9: (-83.439,30.895,1.753)
O5': (-86.913,28.717,4.755)
O3': (-85.818,27.240,0.958)
OP1: (-85.790,24.800,0.504)
OP2: (-83.899,25.936,1.801)
C3': (-82.931,26.345,-3.224)
C1': (-82.078,28.521,-3.041)
C5': (-84.951,26.876,-1.736)
O4': (-83.400,28.538,-2.548)
C8: (-81.559,27.957,-0.691)
O2': (-82.344,27.578,-5.224)
C6: (-78.262,28.992,-0.032)
C5: (-79.555,28.632,-0.456)
C4: (-79.901,28.933,-1.746)
P: (-84.897,25.970,0.700)
C4': (-84.067,27.296,-2.876)
C2': (-81.933,27.271,-3.898)
C2: (-77.904,29.828,-2.115)
N1: (-77.428,29.604,-0.899)
N3: (-79.107,29.541,-2.630)
N6: (-77.848,28.735,1.215)
N7: (-80.616,28.022,0.206)
N9: (-81.186,28.484,-1.887)
O5': (-84.194,26.353,-0.668)
O3': (-83.356,25.268,-4.043)
OP2: (-83.899,25.936,1.801)
C3': (-82.931,26.345,-3.224)
C1': (-82.078,28.521,-3.041)
C5': (-84.951,26.876,-1.736)
O4': (-83.400,28.538,-2.548)
C8: (-81.559,27.957,-0.691)
O2': (-82.344,27.578,-5.224)
C6: (-78.262,28.992,-0.032)
C5: (-79.555,28.632,-0.456)
C4: (-79.901,28.933,-1.746)
P: (-84.897,25.970,0.700)
C4': (-84.067,27.296,-2.876)
C2': (-81.933,27.271,-3.898)
C2: (-77.904,29.828,-2.115)
N1: (-77.428,29.604,-0.899)
N3: (-79.107,29.541,-2.630)
N6: (-77.848,28.735,1.215)
N7: (-80.616,28.022,0.206)
N9: (-81.186,28.484,-1.887)
O5': (-84.194,26.353,-0.668)
O3': (-83.356,25.268,-4.043)
Image (generated by PyMOL):