ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01205:01207

Extra

PDB:
ATOM 1 O3' C A1204 21.585 101.340 138.499 1.00 48.53 O
ATOM 2 P A A1205 20.503 102.052 137.541 1.00 48.10 P
ATOM 3 OP1 A A1205 19.230 102.158 138.293 1.00 50.87 O
ATOM 4 OP2 A A1205 20.521 101.355 136.236 1.00 49.16 O
ATOM 5 O5' A A1205 21.040 103.535 137.326 1.00 46.99 O
ATOM 6 C5' A A1205 22.430 103.804 137.090 1.00 45.43 C
ATOM 7 C4' A A1205 22.631 104.424 135.717 1.00 45.46 C
ATOM 8 O4' A A1205 23.989 104.903 135.594 1.00 47.36 O
ATOM 9 C3' A A1205 22.469 103.494 134.524 1.00 44.26 C
ATOM 10 O3' A A1205 22.332 104.274 133.356 1.00 42.95 O
ATOM 11 C2' A A1205 23.827 102.817 134.469 1.00 45.96 C
ATOM 12 O2' A A1205 24.165 102.337 133.186 1.00 46.04 O
ATOM 13 C1' A A1205 24.763 103.953 134.894 1.00 48.14 C
ATOM 14 N9 A A1205 25.788 103.472 135.815 1.00 52.28 N
ATOM 15 C8 A A1205 25.627 102.799 137.009 1.00 53.50 C
ATOM 16 N7 A A1205 26.756 102.467 137.585 1.00 53.36 N
ATOM 17 C5 A A1205 27.718 102.966 136.725 1.00 54.64 C
ATOM 18 C6 A A1205 29.109 102.945 136.770 1.00 55.64 C
ATOM 19 N6 A A1205 29.806 102.407 137.764 1.00 55.39 N
ATOM 20 N1 A A1205 29.773 103.516 135.745 1.00 58.67 N
ATOM 21 C2 A A1205 29.059 104.088 134.753 1.00 57.73 C
ATOM 22 N3 A A1205 27.749 104.186 134.611 1.00 52.81 N
ATOM 23 C4 A A1205 27.132 103.594 135.637 1.00 52.74 C
ATOM 24 P A A1206 20.894 104.477 132.684 1.00 44.05 P
ATOM 25 OP1 A A1206 20.258 105.633 133.388 1.00 41.71 O
ATOM 26 OP2 A A1206 20.188 103.165 132.628 1.00 41.08 O
ATOM 27 O5' A A1206 21.261 104.934 131.197 1.00 42.34 O
TER

ATOM 1 O3' A B1206 25.492 104.297 129.905 1.00 35.69 O
ATOM 2 P A B1207 25.911 102.831 129.405 1.00 37.41 P
ATOM 3 OP1 A B1207 26.266 102.981 127.974 1.00 35.75 O
ATOM 4 OP2 A B1207 24.867 101.853 129.805 1.00 37.13 O
ATOM 5 O5' A B1207 27.243 102.504 130.214 1.00 37.65 O
ATOM 6 C5' A B1207 28.496 103.121 129.858 1.00 41.50 C
ATOM 7 C4' A B1207 29.630 102.483 130.621 1.00 42.15 C
ATOM 8 O4' A B1207 29.473 102.755 132.033 1.00 42.98 O
ATOM 9 C3' A B1207 29.695 100.970 130.522 1.00 42.09 C
ATOM 10 O3' A B1207 30.403 100.584 129.356 1.00 43.05 O
ATOM 11 C2' A B1207 30.411 100.582 131.807 1.00 41.68 C
ATOM 12 O2' A B1207 31.807 100.754 131.737 1.00 41.51 O
ATOM 13 C1' A B1207 29.848 101.615 132.785 1.00 42.81 C
ATOM 14 N9 A B1207 28.673 101.156 133.526 1.00 43.92 N
ATOM 15 C8 A B1207 27.351 101.440 133.280 1.00 42.86 C
ATOM 16 N7 A B1207 26.526 100.882 134.125 1.00 43.06 N
ATOM 17 C5 A B1207 27.357 100.180 134.987 1.00 44.77 C
ATOM 18 C6 A B1207 27.093 99.365 136.100 1.00 45.93 C
ATOM 19 N6 A B1207 25.866 99.110 136.555 1.00 45.89 N
ATOM 20 N1 A B1207 28.147 98.810 136.737 1.00 47.11 N
ATOM 21 C2 A B1207 29.379 99.062 136.276 1.00 46.25 C
ATOM 22 N3 A B1207 29.753 99.806 135.239 1.00 45.13 N
ATOM 23 C4 A B1207 28.682 100.342 134.630 1.00 44.10 C
ATOM 24 P U B1208 30.105 99.164 128.682 1.00 46.11 P
ATOM 25 OP1 U B1208 31.036 99.000 127.539 1.00 48.54 O
ATOM 26 OP2 U B1208 28.645 99.054 128.452 1.00 47.06 O
ATOM 27 O5' U B1208 30.491 98.115 129.814 1.00 45.37 O
TER

Atoms:
OP1: (19.230,102.158,138.293)
OP2: (20.521,101.355,136.236)
C3': (22.469,103.494,134.524)
C1': (24.763,103.953,134.894)
C5': (22.430,103.804,137.090)
O4': (23.989,104.903,135.594)
C8: (25.627,102.799,137.009)
O2': (24.165,102.337,133.186)
C6: (29.109,102.945,136.770)
C5: (27.718,102.966,136.725)
C4: (27.132,103.594,135.637)
P: (20.503,102.052,137.541)
C4': (22.631,104.424,135.717)
C2': (23.827,102.817,134.469)
C2: (29.059,104.088,134.753)
N1: (29.773,103.516,135.745)
N3: (27.749,104.186,134.611)
N6: (29.806,102.407,137.764)
N7: (26.756,102.467,137.585)
N9: (25.788,103.472,135.815)
O5': (21.040,103.535,137.326)
O3': (22.332,104.274,133.356)
OP1: (26.266,102.981,127.974)
OP2: (24.867,101.853,129.805)
C3': (29.695,100.970,130.522)
C1': (29.848,101.615,132.785)
C5': (28.496,103.121,129.858)
O4': (29.473,102.755,132.033)
C8: (27.351,101.440,133.280)
O2': (31.807,100.754,131.737)
C6: (27.093,99.365,136.100)
C5: (27.357,100.180,134.987)
C4: (28.682,100.342,134.630)
P: (25.911,102.831,129.405)
C4': (29.630,102.483,130.621)
C2': (30.411,100.582,131.807)
C2: (29.379,99.062,136.276)
N1: (28.147,98.810,136.737)
N3: (29.753,99.806,135.239)
N6: (25.866,99.110,136.555)
N7: (26.526,100.882,134.125)
N9: (28.673,101.156,133.526)
O5': (27.243,102.504,130.214)
O3': (30.403,100.584,129.356)
Image (generated by PyMOL):
PyMOL image
show in jmol