Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21124:21125
Extra
PDB:
ATOM 1 O3' G A1123 -67.582 0.242 85.460 1.00 63.86 O
ATOM 2 P A A1124 -67.671 -1.316 85.790 1.00 65.28 P
ATOM 3 OP1 A A1124 -67.139 -1.491 87.164 1.00 65.27 O
ATOM 4 OP2 A A1124 -67.032 -2.038 84.674 1.00 64.94 O
ATOM 5 O5' A A1124 -69.218 -1.589 85.769 1.00 65.87 O
ATOM 6 C5' A A1124 -70.052 -1.010 86.740 1.00 66.29 C
ATOM 7 C4' A A1124 -71.459 -0.921 86.252 1.00 66.78 C
ATOM 8 O4' A A1124 -71.494 -0.197 84.993 1.00 66.63 O
ATOM 9 C3' A A1124 -72.144 -2.240 85.934 1.00 67.07 C
ATOM 10 O3' A A1124 -72.597 -2.924 87.099 1.00 67.44 O
ATOM 11 C2' A A1124 -73.262 -1.785 85.022 1.00 67.41 C
ATOM 12 O2' A A1124 -74.287 -1.191 85.793 1.00 67.92 O
ATOM 13 C1' A A1124 -72.570 -0.668 84.222 1.00 67.00 C
ATOM 14 N9 A A1124 -72.057 -1.139 82.929 1.00 66.67 N
ATOM 15 C8 A A1124 -70.799 -1.557 82.578 1.00 66.13 C
ATOM 16 N7 A A1124 -70.689 -1.929 81.319 1.00 65.98 N
ATOM 17 C5 A A1124 -71.965 -1.735 80.819 1.00 66.45 C
ATOM 18 C6 A A1124 -72.525 -1.941 79.555 1.00 66.59 C
ATOM 19 N6 A A1124 -71.866 -2.412 78.498 1.00 66.26 N
ATOM 20 N1 A A1124 -73.824 -1.638 79.406 1.00 67.13 N
ATOM 21 C2 A A1124 -74.499 -1.182 80.463 1.00 67.50 C
ATOM 22 N3 A A1124 -74.094 -0.954 81.700 1.00 67.42 N
ATOM 23 C4 A A1124 -72.807 -1.259 81.803 1.00 66.88 C
ATOM 24 P A A1125 -72.615 -4.546 87.147 1.00 69.03 P
ATOM 25 OP1 A A1125 -73.067 -4.957 88.500 1.00 69.45 O
ATOM 26 OP2 A A1125 -71.286 -5.021 86.667 1.00 68.45 O
ATOM 27 O5' A A1125 -73.740 -4.919 86.095 1.00 69.36 O
TER
ATOM 1 O3' A B1124 -72.597 -2.924 87.099 1.00 67.44 O
ATOM 2 P A B1125 -72.615 -4.546 87.147 1.00 69.03 P
ATOM 3 OP1 A B1125 -73.067 -4.957 88.500 1.00 69.45 O
ATOM 4 OP2 A B1125 -71.286 -5.021 86.667 1.00 68.45 O
ATOM 5 O5' A B1125 -73.740 -4.919 86.095 1.00 69.36 O
ATOM 6 C5' A B1125 -75.074 -5.096 86.524 1.00 70.00 C
ATOM 7 C4' A B1125 -76.037 -4.974 85.381 1.00 70.26 C
ATOM 8 O4' A B1125 -75.578 -3.956 84.458 1.00 69.90 O
ATOM 9 C3' A B1125 -76.220 -6.219 84.525 1.00 70.29 C
ATOM 10 O3' A B1125 -77.152 -7.130 85.095 1.00 70.83 O
ATOM 11 C2' A B1125 -76.674 -5.632 83.196 1.00 70.30 C
ATOM 12 O2' A B1125 -78.056 -5.312 83.237 1.00 70.93 O
ATOM 13 C1' A B1125 -75.871 -4.332 83.140 1.00 69.89 C
ATOM 14 N9 A B1125 -74.600 -4.525 82.446 1.00 69.26 N
ATOM 15 C8 A B1125 -73.360 -4.533 83.013 1.00 68.80 C
ATOM 16 N7 A B1125 -72.423 -4.786 82.136 1.00 68.33 N
ATOM 17 C5 A B1125 -73.099 -4.958 80.946 1.00 68.49 C
ATOM 18 C6 A B1125 -72.682 -5.242 79.664 1.00 68.22 C
ATOM 19 N6 A B1125 -71.408 -5.387 79.377 1.00 67.68 N
ATOM 20 N1 A B1125 -73.595 -5.353 78.682 1.00 68.52 N
ATOM 21 C2 A B1125 -74.873 -5.181 78.974 1.00 69.09 C
ATOM 22 N3 A B1125 -75.401 -4.919 80.166 1.00 69.41 N
ATOM 23 C4 A B1125 -74.446 -4.810 81.113 1.00 69.07 C
ATOM 24 P U B1126 -77.139 -8.692 84.706 1.00 74.53 P
ATOM 25 OP1 U B1126 -78.211 -9.356 85.489 1.00 75.18 O
ATOM 26 OP2 U B1126 -75.738 -9.175 84.861 1.00 73.97 O
ATOM 27 O5' U B1126 -77.555 -8.684 83.173 1.00 74.51 O
TER
ATOM 2 P A A1124 -67.671 -1.316 85.790 1.00 65.28 P
ATOM 3 OP1 A A1124 -67.139 -1.491 87.164 1.00 65.27 O
ATOM 4 OP2 A A1124 -67.032 -2.038 84.674 1.00 64.94 O
ATOM 5 O5' A A1124 -69.218 -1.589 85.769 1.00 65.87 O
ATOM 6 C5' A A1124 -70.052 -1.010 86.740 1.00 66.29 C
ATOM 7 C4' A A1124 -71.459 -0.921 86.252 1.00 66.78 C
ATOM 8 O4' A A1124 -71.494 -0.197 84.993 1.00 66.63 O
ATOM 9 C3' A A1124 -72.144 -2.240 85.934 1.00 67.07 C
ATOM 10 O3' A A1124 -72.597 -2.924 87.099 1.00 67.44 O
ATOM 11 C2' A A1124 -73.262 -1.785 85.022 1.00 67.41 C
ATOM 12 O2' A A1124 -74.287 -1.191 85.793 1.00 67.92 O
ATOM 13 C1' A A1124 -72.570 -0.668 84.222 1.00 67.00 C
ATOM 14 N9 A A1124 -72.057 -1.139 82.929 1.00 66.67 N
ATOM 15 C8 A A1124 -70.799 -1.557 82.578 1.00 66.13 C
ATOM 16 N7 A A1124 -70.689 -1.929 81.319 1.00 65.98 N
ATOM 17 C5 A A1124 -71.965 -1.735 80.819 1.00 66.45 C
ATOM 18 C6 A A1124 -72.525 -1.941 79.555 1.00 66.59 C
ATOM 19 N6 A A1124 -71.866 -2.412 78.498 1.00 66.26 N
ATOM 20 N1 A A1124 -73.824 -1.638 79.406 1.00 67.13 N
ATOM 21 C2 A A1124 -74.499 -1.182 80.463 1.00 67.50 C
ATOM 22 N3 A A1124 -74.094 -0.954 81.700 1.00 67.42 N
ATOM 23 C4 A A1124 -72.807 -1.259 81.803 1.00 66.88 C
ATOM 24 P A A1125 -72.615 -4.546 87.147 1.00 69.03 P
ATOM 25 OP1 A A1125 -73.067 -4.957 88.500 1.00 69.45 O
ATOM 26 OP2 A A1125 -71.286 -5.021 86.667 1.00 68.45 O
ATOM 27 O5' A A1125 -73.740 -4.919 86.095 1.00 69.36 O
TER
ATOM 1 O3' A B1124 -72.597 -2.924 87.099 1.00 67.44 O
ATOM 2 P A B1125 -72.615 -4.546 87.147 1.00 69.03 P
ATOM 3 OP1 A B1125 -73.067 -4.957 88.500 1.00 69.45 O
ATOM 4 OP2 A B1125 -71.286 -5.021 86.667 1.00 68.45 O
ATOM 5 O5' A B1125 -73.740 -4.919 86.095 1.00 69.36 O
ATOM 6 C5' A B1125 -75.074 -5.096 86.524 1.00 70.00 C
ATOM 7 C4' A B1125 -76.037 -4.974 85.381 1.00 70.26 C
ATOM 8 O4' A B1125 -75.578 -3.956 84.458 1.00 69.90 O
ATOM 9 C3' A B1125 -76.220 -6.219 84.525 1.00 70.29 C
ATOM 10 O3' A B1125 -77.152 -7.130 85.095 1.00 70.83 O
ATOM 11 C2' A B1125 -76.674 -5.632 83.196 1.00 70.30 C
ATOM 12 O2' A B1125 -78.056 -5.312 83.237 1.00 70.93 O
ATOM 13 C1' A B1125 -75.871 -4.332 83.140 1.00 69.89 C
ATOM 14 N9 A B1125 -74.600 -4.525 82.446 1.00 69.26 N
ATOM 15 C8 A B1125 -73.360 -4.533 83.013 1.00 68.80 C
ATOM 16 N7 A B1125 -72.423 -4.786 82.136 1.00 68.33 N
ATOM 17 C5 A B1125 -73.099 -4.958 80.946 1.00 68.49 C
ATOM 18 C6 A B1125 -72.682 -5.242 79.664 1.00 68.22 C
ATOM 19 N6 A B1125 -71.408 -5.387 79.377 1.00 67.68 N
ATOM 20 N1 A B1125 -73.595 -5.353 78.682 1.00 68.52 N
ATOM 21 C2 A B1125 -74.873 -5.181 78.974 1.00 69.09 C
ATOM 22 N3 A B1125 -75.401 -4.919 80.166 1.00 69.41 N
ATOM 23 C4 A B1125 -74.446 -4.810 81.113 1.00 69.07 C
ATOM 24 P U B1126 -77.139 -8.692 84.706 1.00 74.53 P
ATOM 25 OP1 U B1126 -78.211 -9.356 85.489 1.00 75.18 O
ATOM 26 OP2 U B1126 -75.738 -9.175 84.861 1.00 73.97 O
ATOM 27 O5' U B1126 -77.555 -8.684 83.173 1.00 74.51 O
TER
Atoms:
OP1: (-67.139,-1.491,87.164)
OP2: (-67.032,-2.038,84.674)
C3': (-72.144,-2.240,85.934)
C1': (-72.570,-0.668,84.222)
C5': (-70.052,-1.010,86.740)
O4': (-71.494,-0.197,84.993)
C8: (-70.799,-1.557,82.578)
O2': (-74.287,-1.191,85.793)
C6: (-72.525,-1.941,79.555)
C5: (-71.965,-1.735,80.819)
C4: (-72.807,-1.259,81.803)
P: (-67.671,-1.316,85.790)
C4': (-71.459,-0.921,86.252)
C2': (-73.262,-1.785,85.022)
C2: (-74.499,-1.182,80.463)
N1: (-73.824,-1.638,79.406)
N3: (-74.094,-0.954,81.700)
N6: (-71.866,-2.412,78.498)
N7: (-70.689,-1.929,81.319)
N9: (-72.057,-1.139,82.929)
O5': (-69.218,-1.589,85.769)
O3': (-72.597,-2.924,87.099)
OP2: (-67.032,-2.038,84.674)
C3': (-72.144,-2.240,85.934)
C1': (-72.570,-0.668,84.222)
C5': (-70.052,-1.010,86.740)
O4': (-71.494,-0.197,84.993)
C8: (-70.799,-1.557,82.578)
O2': (-74.287,-1.191,85.793)
C6: (-72.525,-1.941,79.555)
C5: (-71.965,-1.735,80.819)
C4: (-72.807,-1.259,81.803)
P: (-67.671,-1.316,85.790)
C4': (-71.459,-0.921,86.252)
C2': (-73.262,-1.785,85.022)
C2: (-74.499,-1.182,80.463)
N1: (-73.824,-1.638,79.406)
N3: (-74.094,-0.954,81.700)
N6: (-71.866,-2.412,78.498)
N7: (-70.689,-1.929,81.319)
N9: (-72.057,-1.139,82.929)
O5': (-69.218,-1.589,85.769)
O3': (-72.597,-2.924,87.099)
OP1: (-73.067,-4.957,88.500)
OP2: (-71.286,-5.021,86.667)
C3': (-76.220,-6.219,84.525)
C1': (-75.871,-4.332,83.140)
C5': (-75.074,-5.096,86.524)
O4': (-75.578,-3.956,84.458)
C8: (-73.360,-4.533,83.013)
O2': (-78.056,-5.312,83.237)
C6: (-72.682,-5.242,79.664)
C5: (-73.099,-4.958,80.946)
C4: (-74.446,-4.810,81.113)
P: (-72.615,-4.546,87.147)
C4': (-76.037,-4.974,85.381)
C2': (-76.674,-5.632,83.196)
C2: (-74.873,-5.181,78.974)
N1: (-73.595,-5.353,78.682)
N3: (-75.401,-4.919,80.166)
N6: (-71.408,-5.387,79.377)
N7: (-72.423,-4.786,82.136)
N9: (-74.600,-4.525,82.446)
O5': (-73.740,-4.919,86.095)
O3': (-77.152,-7.130,85.095)
OP2: (-71.286,-5.021,86.667)
C3': (-76.220,-6.219,84.525)
C1': (-75.871,-4.332,83.140)
C5': (-75.074,-5.096,86.524)
O4': (-75.578,-3.956,84.458)
C8: (-73.360,-4.533,83.013)
O2': (-78.056,-5.312,83.237)
C6: (-72.682,-5.242,79.664)
C5: (-73.099,-4.958,80.946)
C4: (-74.446,-4.810,81.113)
P: (-72.615,-4.546,87.147)
C4': (-76.037,-4.974,85.381)
C2': (-76.674,-5.632,83.196)
C2: (-74.873,-5.181,78.974)
N1: (-73.595,-5.353,78.682)
N3: (-75.401,-4.919,80.166)
N6: (-71.408,-5.387,79.377)
N7: (-72.423,-4.786,82.136)
N9: (-74.600,-4.525,82.446)
O5': (-73.740,-4.919,86.095)
O3': (-77.152,-7.130,85.095)
Image (generated by PyMOL):