ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0417:0418

Extra

PDB:
ATOM 1 O3' G A 416 81.015 97.873 14.634 1.00 54.07 O
ATOM 2 P A A 417 81.399 99.413 14.499 1.00 52.32 P
ATOM 3 OP1 A A 417 80.171 100.165 14.123 1.00 51.12 O
ATOM 4 OP2 A A 417 82.596 99.475 13.633 1.00 53.52 O
ATOM 5 O5' A A 417 81.791 99.795 15.993 1.00 53.10 O
ATOM 6 C5' A A 417 80.796 99.792 17.047 1.00 49.27 C
ATOM 7 C4' A A 417 81.472 99.946 18.384 1.00 48.58 C
ATOM 8 O4' A A 417 82.094 98.697 18.769 1.00 45.75 O
ATOM 9 C3' A A 417 82.606 100.954 18.361 1.00 47.39 C
ATOM 10 O3' A A 417 82.104 102.267 18.537 1.00 49.55 O
ATOM 11 C2' A A 417 83.503 100.468 19.486 1.00 48.01 C
ATOM 12 O2' A A 417 83.016 100.836 20.759 1.00 47.89 O
ATOM 13 C1' A A 417 83.367 98.952 19.332 1.00 46.47 C
ATOM 14 N9 A A 417 84.363 98.335 18.458 1.00 47.65 N
ATOM 15 C8 A A 417 84.181 97.897 17.167 1.00 46.89 C
ATOM 16 N7 A A 417 85.238 97.319 16.654 1.00 47.98 N
ATOM 17 C5 A A 417 86.185 97.391 17.667 1.00 45.82 C
ATOM 18 C6 A A 417 87.510 96.940 17.755 1.00 44.56 C
ATOM 19 N6 A A 417 88.138 96.289 16.778 1.00 44.97 N
ATOM 20 N1 A A 417 88.180 97.181 18.901 1.00 45.47 N
ATOM 21 C2 A A 417 87.551 97.829 19.883 1.00 42.87 C
ATOM 22 N3 A A 417 86.307 98.296 19.922 1.00 44.69 N
ATOM 23 C4 A A 417 85.668 98.037 18.773 1.00 46.01 C
ATOM 24 P A A 418 82.626 103.448 17.584 1.00 51.23 P
ATOM 25 OP1 A A 418 81.688 104.587 17.710 1.00 53.58 O
ATOM 26 OP2 A A 418 82.901 102.874 16.247 1.00 51.10 O
ATOM 27 O5' A A 418 84.007 103.870 18.253 1.00 49.39 O
TER

ATOM 1 O3' A B 417 82.104 102.267 18.537 1.00 49.55 O
ATOM 2 P A B 418 82.626 103.448 17.584 1.00 51.23 P
ATOM 3 OP1 A B 418 81.688 104.587 17.710 1.00 53.58 O
ATOM 4 OP2 A B 418 82.901 102.874 16.247 1.00 51.10 O
ATOM 5 O5' A B 418 84.007 103.870 18.253 1.00 49.39 O
ATOM 6 C5' A B 418 84.062 104.258 19.633 1.00 43.83 C
ATOM 7 C4' A B 418 85.455 104.048 20.173 1.00 45.06 C
ATOM 8 O4' A B 418 85.768 102.629 20.197 1.00 43.31 O
ATOM 9 C3' A B 418 86.570 104.663 19.345 1.00 42.71 C
ATOM 10 O3' A B 418 86.727 106.046 19.627 1.00 43.51 O
ATOM 11 C2' A B 418 87.772 103.828 19.760 1.00 43.01 C
ATOM 12 O2' A B 418 88.310 104.195 21.005 1.00 46.14 O
ATOM 13 C1' A B 418 87.141 102.441 19.887 1.00 43.71 C
ATOM 14 N9 A B 418 87.227 101.732 18.613 1.00 44.80 N
ATOM 15 C8 A B 418 86.366 101.808 17.546 1.00 42.57 C
ATOM 16 N7 A B 418 86.744 101.096 16.514 1.00 45.49 N
ATOM 17 C5 A B 418 87.925 100.502 16.934 1.00 43.56 C
ATOM 18 C6 A B 418 88.818 99.637 16.296 1.00 43.80 C
ATOM 19 N6 A B 418 88.659 99.214 15.042 1.00 45.45 N
ATOM 20 N1 A B 418 89.897 99.217 16.992 1.00 43.26 N
ATOM 21 C2 A B 418 90.059 99.656 18.244 1.00 45.54 C
ATOM 22 N3 A B 418 89.289 100.483 18.952 1.00 45.57 N
ATOM 23 C4 A B 418 88.226 100.873 18.229 1.00 43.92 C
ATOM 24 P G B 419 87.023 107.083 18.427 1.00 45.33 P
ATOM 25 OP1 G B 419 88.283 106.680 17.748 1.00 43.25 O
ATOM 26 OP2 G B 419 86.910 108.447 18.985 1.00 46.19 O
ATOM 27 O5' G B 419 85.810 106.876 17.423 1.00 40.84 O
TER

Atoms:
OP1: (80.171,100.165,14.123)
OP2: (82.596,99.475,13.633)
C3': (82.606,100.954,18.361)
C1': (83.367,98.952,19.332)
C5': (80.796,99.792,17.047)
O4': (82.094,98.697,18.769)
C8: (84.181,97.897,17.167)
O2': (83.016,100.836,20.759)
C6: (87.510,96.940,17.755)
C5: (86.185,97.391,17.667)
C4: (85.668,98.037,18.773)
P: (81.399,99.413,14.499)
C4': (81.472,99.946,18.384)
C2': (83.503,100.468,19.486)
C2: (87.551,97.829,19.883)
N1: (88.180,97.181,18.901)
N3: (86.307,98.296,19.922)
N6: (88.138,96.289,16.778)
N7: (85.238,97.319,16.654)
N9: (84.363,98.335,18.458)
O5': (81.791,99.795,15.993)
O3': (82.104,102.267,18.537)
OP1: (81.688,104.587,17.710)
OP2: (82.901,102.874,16.247)
C3': (86.570,104.663,19.345)
C1': (87.141,102.441,19.887)
C5': (84.062,104.258,19.633)
O4': (85.768,102.629,20.197)
C8: (86.366,101.808,17.546)
O2': (88.310,104.195,21.005)
C6: (88.818,99.637,16.296)
C5: (87.925,100.502,16.934)
C4: (88.226,100.873,18.229)
P: (82.626,103.448,17.584)
C4': (85.455,104.048,20.173)
C2': (87.772,103.828,19.760)
C2: (90.059,99.656,18.244)
N1: (89.897,99.217,16.992)
N3: (89.289,100.483,18.952)
N6: (88.659,99.214,15.042)
N7: (86.744,101.096,16.514)
N9: (87.227,101.732,18.613)
O5': (84.007,103.870,18.253)
O3': (86.727,106.046,19.627)
Image (generated by PyMOL):
PyMOL image
show in jmol