Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01867:01868
Extra
PDB:
ATOM 1 O3' G A1866 106.211 91.490 57.049 1.00 58.64 O
ATOM 2 P A A1867 106.041 90.427 55.854 1.00 58.21 P
ATOM 3 OP1 A A1867 105.189 89.328 56.389 1.00 57.59 O
ATOM 4 OP2 A A1867 107.385 90.116 55.293 1.00 58.22 O
ATOM 5 O5' A A1867 105.202 91.205 54.744 1.00 55.86 O
ATOM 6 C5' A A1867 103.818 91.523 54.966 1.00 52.96 C
ATOM 7 C4' A A1867 103.396 92.671 54.088 1.00 52.06 C
ATOM 8 O4' A A1867 104.203 93.836 54.387 1.00 51.02 O
ATOM 9 C3' A A1867 103.595 92.477 52.598 1.00 52.67 C
ATOM 10 O3' A A1867 102.533 91.724 52.041 1.00 54.30 O
ATOM 11 C2' A A1867 103.595 93.911 52.092 1.00 52.00 C
ATOM 12 O2' A A1867 102.294 94.455 52.015 1.00 51.20 O
ATOM 13 C1' A A1867 104.354 94.618 53.215 1.00 51.03 C
ATOM 14 N9 A A1867 105.780 94.789 52.946 1.00 49.50 N
ATOM 15 C8 A A1867 106.813 93.934 53.222 1.00 49.29 C
ATOM 16 N7 A A1867 107.990 94.403 52.886 1.00 50.87 N
ATOM 17 C5 A A1867 107.711 95.648 52.343 1.00 50.28 C
ATOM 18 C6 A A1867 108.533 96.659 51.809 1.00 51.37 C
ATOM 19 N6 A A1867 109.864 96.573 51.725 1.00 50.36 N
ATOM 20 N1 A A1867 107.932 97.779 51.355 1.00 52.50 N
ATOM 21 C2 A A1867 106.598 97.868 51.436 1.00 52.46 C
ATOM 22 N3 A A1867 105.723 96.990 51.916 1.00 50.45 N
ATOM 23 C4 A A1867 106.352 95.892 52.362 1.00 49.84 C
ATOM 24 P A A1868 102.778 90.875 50.702 1.00 56.41 P
ATOM 25 OP1 A A1868 101.577 90.016 50.528 1.00 54.23 O
ATOM 26 OP2 A A1868 104.133 90.259 50.776 1.00 53.56 O
ATOM 27 O5' A A1868 102.773 91.966 49.544 1.00 53.62 O
TER
ATOM 1 O3' A B1867 102.533 91.724 52.041 1.00 54.30 O
ATOM 2 P A B1868 102.778 90.875 50.702 1.00 56.41 P
ATOM 3 OP1 A B1868 101.577 90.016 50.528 1.00 54.23 O
ATOM 4 OP2 A B1868 104.133 90.259 50.776 1.00 53.56 O
ATOM 5 O5' A B1868 102.773 91.966 49.544 1.00 53.62 O
ATOM 6 C5' A B1868 101.596 92.739 49.277 1.00 51.99 C
ATOM 7 C4' A B1868 101.948 93.952 48.458 1.00 52.26 C
ATOM 8 O4' A B1868 102.848 94.804 49.215 1.00 51.78 O
ATOM 9 C3' A B1868 102.707 93.678 47.174 1.00 52.24 C
ATOM 10 O3' A B1868 101.848 93.270 46.122 1.00 55.43 O
ATOM 11 C2' A B1868 103.376 95.018 46.917 1.00 51.51 C
ATOM 12 O2' A B1868 102.478 95.991 46.420 1.00 51.13 O
ATOM 13 C1' A B1868 103.786 95.405 48.337 1.00 50.66 C
ATOM 14 N9 A B1868 105.112 94.894 48.677 1.00 49.45 N
ATOM 15 C8 A B1868 105.433 93.665 49.202 1.00 48.73 C
ATOM 16 N7 A B1868 106.717 93.489 49.389 1.00 48.84 N
ATOM 17 C5 A B1868 107.283 94.680 48.959 1.00 48.21 C
ATOM 18 C6 A B1868 108.612 95.122 48.896 1.00 47.93 C
ATOM 19 N6 A B1868 109.655 94.383 49.274 1.00 48.86 N
ATOM 20 N1 A B1868 108.836 96.368 48.425 1.00 48.53 N
ATOM 21 C2 A B1868 107.786 97.108 48.041 1.00 48.47 C
ATOM 22 N3 A B1868 106.493 96.801 48.047 1.00 47.48 N
ATOM 23 C4 A B1868 106.305 95.557 48.523 1.00 48.92 C
ATOM 24 P C B1869 102.381 92.219 45.029 1.00 59.53 P
ATOM 25 OP1 C B1869 101.202 91.811 44.218 1.00 59.32 O
ATOM 26 OP2 C B1869 103.211 91.179 45.707 1.00 57.19 O
ATOM 27 O5' C B1869 103.341 93.086 44.101 1.00 60.39 O
TER
ATOM 2 P A A1867 106.041 90.427 55.854 1.00 58.21 P
ATOM 3 OP1 A A1867 105.189 89.328 56.389 1.00 57.59 O
ATOM 4 OP2 A A1867 107.385 90.116 55.293 1.00 58.22 O
ATOM 5 O5' A A1867 105.202 91.205 54.744 1.00 55.86 O
ATOM 6 C5' A A1867 103.818 91.523 54.966 1.00 52.96 C
ATOM 7 C4' A A1867 103.396 92.671 54.088 1.00 52.06 C
ATOM 8 O4' A A1867 104.203 93.836 54.387 1.00 51.02 O
ATOM 9 C3' A A1867 103.595 92.477 52.598 1.00 52.67 C
ATOM 10 O3' A A1867 102.533 91.724 52.041 1.00 54.30 O
ATOM 11 C2' A A1867 103.595 93.911 52.092 1.00 52.00 C
ATOM 12 O2' A A1867 102.294 94.455 52.015 1.00 51.20 O
ATOM 13 C1' A A1867 104.354 94.618 53.215 1.00 51.03 C
ATOM 14 N9 A A1867 105.780 94.789 52.946 1.00 49.50 N
ATOM 15 C8 A A1867 106.813 93.934 53.222 1.00 49.29 C
ATOM 16 N7 A A1867 107.990 94.403 52.886 1.00 50.87 N
ATOM 17 C5 A A1867 107.711 95.648 52.343 1.00 50.28 C
ATOM 18 C6 A A1867 108.533 96.659 51.809 1.00 51.37 C
ATOM 19 N6 A A1867 109.864 96.573 51.725 1.00 50.36 N
ATOM 20 N1 A A1867 107.932 97.779 51.355 1.00 52.50 N
ATOM 21 C2 A A1867 106.598 97.868 51.436 1.00 52.46 C
ATOM 22 N3 A A1867 105.723 96.990 51.916 1.00 50.45 N
ATOM 23 C4 A A1867 106.352 95.892 52.362 1.00 49.84 C
ATOM 24 P A A1868 102.778 90.875 50.702 1.00 56.41 P
ATOM 25 OP1 A A1868 101.577 90.016 50.528 1.00 54.23 O
ATOM 26 OP2 A A1868 104.133 90.259 50.776 1.00 53.56 O
ATOM 27 O5' A A1868 102.773 91.966 49.544 1.00 53.62 O
TER
ATOM 1 O3' A B1867 102.533 91.724 52.041 1.00 54.30 O
ATOM 2 P A B1868 102.778 90.875 50.702 1.00 56.41 P
ATOM 3 OP1 A B1868 101.577 90.016 50.528 1.00 54.23 O
ATOM 4 OP2 A B1868 104.133 90.259 50.776 1.00 53.56 O
ATOM 5 O5' A B1868 102.773 91.966 49.544 1.00 53.62 O
ATOM 6 C5' A B1868 101.596 92.739 49.277 1.00 51.99 C
ATOM 7 C4' A B1868 101.948 93.952 48.458 1.00 52.26 C
ATOM 8 O4' A B1868 102.848 94.804 49.215 1.00 51.78 O
ATOM 9 C3' A B1868 102.707 93.678 47.174 1.00 52.24 C
ATOM 10 O3' A B1868 101.848 93.270 46.122 1.00 55.43 O
ATOM 11 C2' A B1868 103.376 95.018 46.917 1.00 51.51 C
ATOM 12 O2' A B1868 102.478 95.991 46.420 1.00 51.13 O
ATOM 13 C1' A B1868 103.786 95.405 48.337 1.00 50.66 C
ATOM 14 N9 A B1868 105.112 94.894 48.677 1.00 49.45 N
ATOM 15 C8 A B1868 105.433 93.665 49.202 1.00 48.73 C
ATOM 16 N7 A B1868 106.717 93.489 49.389 1.00 48.84 N
ATOM 17 C5 A B1868 107.283 94.680 48.959 1.00 48.21 C
ATOM 18 C6 A B1868 108.612 95.122 48.896 1.00 47.93 C
ATOM 19 N6 A B1868 109.655 94.383 49.274 1.00 48.86 N
ATOM 20 N1 A B1868 108.836 96.368 48.425 1.00 48.53 N
ATOM 21 C2 A B1868 107.786 97.108 48.041 1.00 48.47 C
ATOM 22 N3 A B1868 106.493 96.801 48.047 1.00 47.48 N
ATOM 23 C4 A B1868 106.305 95.557 48.523 1.00 48.92 C
ATOM 24 P C B1869 102.381 92.219 45.029 1.00 59.53 P
ATOM 25 OP1 C B1869 101.202 91.811 44.218 1.00 59.32 O
ATOM 26 OP2 C B1869 103.211 91.179 45.707 1.00 57.19 O
ATOM 27 O5' C B1869 103.341 93.086 44.101 1.00 60.39 O
TER
Atoms:
OP1: (105.189,89.328,56.389)
OP2: (107.385,90.116,55.293)
C3': (103.595,92.477,52.598)
C1': (104.354,94.618,53.215)
C5': (103.818,91.523,54.966)
O4': (104.203,93.836,54.387)
C8: (106.813,93.934,53.222)
O2': (102.294,94.455,52.015)
C6: (108.533,96.659,51.809)
C5: (107.711,95.648,52.343)
C4: (106.352,95.892,52.362)
P: (106.041,90.427,55.854)
C4': (103.396,92.671,54.088)
C2': (103.595,93.911,52.092)
C2: (106.598,97.868,51.436)
N1: (107.932,97.779,51.355)
N3: (105.723,96.990,51.916)
N6: (109.864,96.573,51.725)
N7: (107.990,94.403,52.886)
N9: (105.780,94.789,52.946)
O5': (105.202,91.205,54.744)
O3': (102.533,91.724,52.041)
OP2: (107.385,90.116,55.293)
C3': (103.595,92.477,52.598)
C1': (104.354,94.618,53.215)
C5': (103.818,91.523,54.966)
O4': (104.203,93.836,54.387)
C8: (106.813,93.934,53.222)
O2': (102.294,94.455,52.015)
C6: (108.533,96.659,51.809)
C5: (107.711,95.648,52.343)
C4: (106.352,95.892,52.362)
P: (106.041,90.427,55.854)
C4': (103.396,92.671,54.088)
C2': (103.595,93.911,52.092)
C2: (106.598,97.868,51.436)
N1: (107.932,97.779,51.355)
N3: (105.723,96.990,51.916)
N6: (109.864,96.573,51.725)
N7: (107.990,94.403,52.886)
N9: (105.780,94.789,52.946)
O5': (105.202,91.205,54.744)
O3': (102.533,91.724,52.041)
OP1: (101.577,90.016,50.528)
OP2: (104.133,90.259,50.776)
C3': (102.707,93.678,47.174)
C1': (103.786,95.405,48.337)
C5': (101.596,92.739,49.277)
O4': (102.848,94.804,49.215)
C8: (105.433,93.665,49.202)
O2': (102.478,95.991,46.420)
C6: (108.612,95.122,48.896)
C5: (107.283,94.680,48.959)
C4: (106.305,95.557,48.523)
P: (102.778,90.875,50.702)
C4': (101.948,93.952,48.458)
C2': (103.376,95.018,46.917)
C2: (107.786,97.108,48.041)
N1: (108.836,96.368,48.425)
N3: (106.493,96.801,48.047)
N6: (109.655,94.383,49.274)
N7: (106.717,93.489,49.389)
N9: (105.112,94.894,48.677)
O5': (102.773,91.966,49.544)
O3': (101.848,93.270,46.122)
OP2: (104.133,90.259,50.776)
C3': (102.707,93.678,47.174)
C1': (103.786,95.405,48.337)
C5': (101.596,92.739,49.277)
O4': (102.848,94.804,49.215)
C8: (105.433,93.665,49.202)
O2': (102.478,95.991,46.420)
C6: (108.612,95.122,48.896)
C5: (107.283,94.680,48.959)
C4: (106.305,95.557,48.523)
P: (102.778,90.875,50.702)
C4': (101.948,93.952,48.458)
C2': (103.376,95.018,46.917)
C2: (107.786,97.108,48.041)
N1: (108.836,96.368,48.425)
N3: (106.493,96.801,48.047)
N6: (109.655,94.383,49.274)
N7: (106.717,93.489,49.389)
N9: (105.112,94.894,48.677)
O5': (102.773,91.966,49.544)
O3': (101.848,93.270,46.122)
Image (generated by PyMOL):