ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:R85:R86

Extra

PDB:
ATOM 1 O3' C A 84 7.953 1.970 78.116 1.00 77.62 O
ATOM 2 P A A 85 7.653 3.004 76.932 1.00 78.92 P
ATOM 3 OP1 A A 85 8.673 4.075 76.993 1.00 78.93 O
ATOM 4 OP2 A A 85 6.215 3.350 76.982 1.00 78.91 O
ATOM 5 O5' A A 85 7.932 2.134 75.618 1.00 78.48 O
ATOM 6 C5' A A 85 6.857 1.791 74.751 1.00 77.70 C
ATOM 7 C4' A A 85 7.347 0.942 73.592 1.00 77.04 C
ATOM 8 O4' A A 85 8.735 0.583 73.810 1.00 76.57 O
ATOM 9 C3' A A 85 6.611 -0.377 73.408 1.00 76.86 C
ATOM 10 O3' A A 85 5.501 -0.196 72.538 1.00 76.38 O
ATOM 11 C2' A A 85 7.681 -1.258 72.773 1.00 76.48 C
ATOM 12 O2' A A 85 7.798 -1.045 71.380 1.00 76.25 O
ATOM 13 C1' A A 85 8.941 -0.778 73.486 1.00 76.27 C
ATOM 14 N9 A A 85 9.227 -1.506 74.720 1.00 75.86 N
ATOM 15 C8 A A 85 8.375 -1.686 75.774 1.00 75.79 C
ATOM 16 N7 A A 85 8.900 -2.381 76.750 1.00 75.56 N
ATOM 17 C5 A A 85 10.169 -2.657 76.275 1.00 75.54 C
ATOM 18 C6 A A 85 11.248 -3.353 76.802 1.00 75.50 C
ATOM 19 N6 A A 85 11.212 -3.936 78.005 1.00 75.51 N
ATOM 20 N1 A A 85 12.382 -3.452 76.080 1.00 75.52 N
ATOM 21 C2 A A 85 12.425 -2.873 74.879 1.00 75.60 C
ATOM 22 N3 A A 85 11.464 -2.185 74.274 1.00 75.51 N
ATOM 23 C4 A A 85 10.380 -2.126 75.034 1.00 75.65 C
ATOM 24 P A A 86 4.615 -1.453 72.097 1.00 76.26 P
ATOM 25 OP1 A A 86 3.340 -0.942 71.548 1.00 76.61 O
ATOM 26 OP2 A A 86 4.601 -2.417 73.221 1.00 76.31 O
ATOM 27 O5' A A 86 5.457 -2.078 70.888 1.00 74.97 O
TER

ATOM 1 O3' A B 85 5.501 -0.196 72.538 1.00 76.38 O
ATOM 2 P A B 86 4.615 -1.453 72.097 1.00 76.26 P
ATOM 3 OP1 A B 86 3.340 -0.942 71.548 1.00 76.61 O
ATOM 4 OP2 A B 86 4.601 -2.417 73.221 1.00 76.31 O
ATOM 5 O5' A B 86 5.457 -2.078 70.888 1.00 74.97 O
ATOM 6 C5' A B 86 6.255 -3.236 71.103 1.00 73.17 C
ATOM 7 C4' A B 86 7.098 -3.546 69.880 1.00 71.67 C
ATOM 8 O4' A B 86 8.494 -3.362 70.203 1.00 71.01 O
ATOM 9 C3' A B 86 6.982 -4.980 69.370 1.00 70.65 C
ATOM 10 O3' A B 86 6.656 -4.963 68.005 1.00 69.78 O
ATOM 11 C2' A B 86 8.361 -5.606 69.547 1.00 70.33 C
ATOM 12 O2' A B 86 9.081 -5.670 68.332 1.00 70.42 O
ATOM 13 C1' A B 86 9.030 -4.630 70.498 1.00 70.03 C
ATOM 14 N9 A B 86 8.763 -4.930 71.897 1.00 69.05 N
ATOM 15 C8 A B 86 7.626 -4.711 72.624 1.00 68.69 C
ATOM 16 N7 A B 86 7.729 -5.091 73.878 1.00 68.61 N
ATOM 17 C5 A B 86 9.021 -5.584 73.972 1.00 68.33 C
ATOM 18 C6 A B 86 9.765 -6.140 75.030 1.00 68.42 C
ATOM 19 N6 A B 86 9.284 -6.308 76.266 1.00 68.62 N
ATOM 20 N1 A B 86 11.029 -6.525 74.755 1.00 68.16 N
ATOM 21 C2 A B 86 11.505 -6.359 73.513 1.00 68.16 C
ATOM 22 N3 A B 86 10.912 -5.850 72.446 1.00 68.18 N
ATOM 23 C4 A B 86 9.665 -5.484 72.756 1.00 68.48 C
ATOM 24 P G B 87 5.455 -5.884 67.517 1.00 68.98 P
ATOM 25 OP1 G B 87 4.251 -5.023 67.466 1.00 68.63 O
ATOM 26 OP2 G B 87 5.442 -7.126 68.324 1.00 69.16 O
ATOM 27 O5' G B 87 5.871 -6.252 66.014 1.00 68.00 O
TER

Atoms:
OP1: (8.673,4.075,76.993)
OP2: (6.215,3.350,76.982)
C3': (6.611,-0.377,73.408)
C1': (8.941,-0.778,73.486)
C5': (6.857,1.791,74.751)
O4': (8.735,0.583,73.810)
C8: (8.375,-1.686,75.774)
O2': (7.798,-1.045,71.380)
C6: (11.248,-3.353,76.802)
C5: (10.169,-2.657,76.275)
C4: (10.380,-2.126,75.034)
P: (7.653,3.004,76.932)
C4': (7.347,0.942,73.592)
C2': (7.681,-1.258,72.773)
C2: (12.425,-2.873,74.879)
N1: (12.382,-3.452,76.080)
N3: (11.464,-2.185,74.274)
N6: (11.212,-3.936,78.005)
N7: (8.900,-2.381,76.750)
N9: (9.227,-1.506,74.720)
O5': (7.932,2.134,75.618)
O3': (5.501,-0.196,72.538)
OP1: (3.340,-0.942,71.548)
OP2: (4.601,-2.417,73.221)
C3': (6.982,-4.980,69.370)
C1': (9.030,-4.630,70.498)
C5': (6.255,-3.236,71.103)
O4': (8.494,-3.362,70.203)
C8: (7.626,-4.711,72.624)
O2': (9.081,-5.670,68.332)
C6: (9.765,-6.140,75.030)
C5: (9.021,-5.584,73.972)
C4: (9.665,-5.484,72.756)
P: (4.615,-1.453,72.097)
C4': (7.098,-3.546,69.880)
C2': (8.361,-5.606,69.547)
C2: (11.505,-6.359,73.513)
N1: (11.029,-6.525,74.755)
N3: (10.912,-5.850,72.446)
N6: (9.284,-6.308,76.266)
N7: (7.729,-5.091,73.878)
N9: (8.763,-4.930,71.897)
O5': (5.457,-2.078,70.888)
O3': (6.656,-4.963,68.005)
Image (generated by PyMOL):
PyMOL image
show in jmol