ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:B48:B49

Extra

PDB:
ATOM 1 O3' G A 47 -19.719 -75.689 39.535 1.00112.45 O
ATOM 2 P A A 48 -18.832 -76.848 38.861 1.00112.27 P
ATOM 3 OP1 A A 48 -17.942 -76.218 37.846 1.00112.09 O
ATOM 4 OP2 A A 48 -19.755 -77.948 38.475 1.00112.14 O
ATOM 5 O5' A A 48 -17.951 -77.424 40.052 1.00110.96 O
ATOM 6 C5' A A 48 -17.123 -78.562 39.868 1.00108.42 C
ATOM 7 C4' A A 48 -15.756 -78.272 40.414 1.00106.58 C
ATOM 8 O4' A A 48 -15.211 -77.141 39.699 1.00105.68 O
ATOM 9 C3' A A 48 -15.769 -77.831 41.866 1.00106.07 C
ATOM 10 O3' A A 48 -15.706 -79.004 42.676 1.00104.69 O
ATOM 11 C2' A A 48 -14.499 -76.987 41.971 1.00105.88 C
ATOM 12 O2' A A 48 -13.315 -77.724 42.218 1.00105.96 O
ATOM 13 C1' A A 48 -14.437 -76.355 40.578 1.00105.07 C
ATOM 14 N9 A A 48 -14.863 -74.970 40.426 1.00104.00 N
ATOM 15 C8 A A 48 -15.840 -74.501 39.582 1.00104.10 C
ATOM 16 N7 A A 48 -15.946 -73.195 39.568 1.00104.31 N
ATOM 17 C5 A A 48 -14.986 -72.778 40.482 1.00104.72 C
ATOM 18 C6 A A 48 -14.589 -71.503 40.915 1.00105.09 C
ATOM 19 N6 A A 48 -15.124 -70.370 40.453 1.00104.68 N
ATOM 20 N1 A A 48 -13.610 -71.432 41.847 1.00105.78 N
ATOM 21 C2 A A 48 -13.070 -72.578 42.298 1.00104.95 C
ATOM 22 N3 A A 48 -13.354 -73.835 41.960 1.00103.84 N
ATOM 23 C4 A A 48 -14.330 -73.865 41.037 1.00104.14 C
ATOM 24 P A A 49 -16.743 -79.198 43.884 1.00103.97 P
ATOM 25 OP1 A A 49 -16.674 -80.608 44.361 1.00102.43 O
ATOM 26 OP2 A A 49 -18.055 -78.636 43.435 1.00104.03 O
ATOM 27 O5' A A 49 -16.119 -78.288 45.034 1.00102.83 O
TER

ATOM 1 O3' A B 48 -15.706 -79.004 42.676 1.00104.69 O
ATOM 2 P A B 49 -16.743 -79.198 43.884 1.00103.97 P
ATOM 3 OP1 A B 49 -16.674 -80.608 44.361 1.00102.43 O
ATOM 4 OP2 A B 49 -18.055 -78.636 43.435 1.00104.03 O
ATOM 5 O5' A B 49 -16.119 -78.288 45.034 1.00102.83 O
ATOM 6 C5' A B 49 -14.904 -78.677 45.674 1.00100.73 C
ATOM 7 C4' A B 49 -14.159 -77.464 46.162 1.00 99.36 C
ATOM 8 O4' A B 49 -14.009 -76.548 45.053 1.00 98.49 O
ATOM 9 C3' A B 49 -14.839 -76.658 47.253 1.00 99.09 C
ATOM 10 O3' A B 49 -14.489 -77.218 48.524 1.00 98.52 O
ATOM 11 C2' A B 49 -14.223 -75.277 47.041 1.00 98.92 C
ATOM 12 O2' A B 49 -12.914 -75.184 47.572 1.00100.24 O
ATOM 13 C1' A B 49 -14.118 -75.220 45.515 1.00 97.02 C
ATOM 14 N9 A B 49 -15.246 -74.606 44.818 1.00 93.48 N
ATOM 15 C8 A B 49 -16.338 -75.233 44.267 1.00 92.32 C
ATOM 16 N7 A B 49 -17.176 -74.412 43.678 1.00 91.71 N
ATOM 17 C5 A B 49 -16.598 -73.161 43.857 1.00 91.08 C
ATOM 18 C6 A B 49 -16.994 -71.869 43.467 1.00 89.91 C
ATOM 19 N6 A B 49 -18.104 -71.604 42.788 1.00 87.49 N
ATOM 20 N1 A B 49 -16.194 -70.840 43.808 1.00 90.35 N
ATOM 21 C2 A B 49 -15.076 -71.101 44.491 1.00 91.56 C
ATOM 22 N3 A B 49 -14.597 -72.269 44.913 1.00 91.69 N
ATOM 23 C4 A B 49 -15.413 -73.267 44.561 1.00 91.81 C
ATOM 24 P A B 50 -15.551 -77.202 49.738 1.00 99.32 P
ATOM 25 OP1 A B 50 -14.982 -77.967 50.876 1.00 97.67 O
ATOM 26 OP2 A B 50 -16.892 -77.581 49.202 1.00100.47 O
ATOM 27 O5' A B 50 -15.622 -75.661 50.157 1.00 98.35 O
TER

Atoms:
OP1: (-17.942,-76.218,37.846)
OP2: (-19.755,-77.948,38.475)
C3': (-15.769,-77.831,41.866)
C1': (-14.437,-76.355,40.578)
C5': (-17.123,-78.562,39.868)
O4': (-15.211,-77.141,39.699)
C8: (-15.840,-74.501,39.582)
O2': (-13.315,-77.724,42.218)
C6: (-14.589,-71.503,40.915)
C5: (-14.986,-72.778,40.482)
C4: (-14.330,-73.865,41.037)
P: (-18.832,-76.848,38.861)
C4': (-15.756,-78.272,40.414)
C2': (-14.499,-76.987,41.971)
C2: (-13.070,-72.578,42.298)
N1: (-13.610,-71.432,41.847)
N3: (-13.354,-73.835,41.960)
N6: (-15.124,-70.370,40.453)
N7: (-15.946,-73.195,39.568)
N9: (-14.863,-74.970,40.426)
O5': (-17.951,-77.424,40.052)
O3': (-15.706,-79.004,42.676)
OP1: (-16.674,-80.608,44.361)
OP2: (-18.055,-78.636,43.435)
C3': (-14.839,-76.658,47.253)
C1': (-14.118,-75.220,45.515)
C5': (-14.904,-78.677,45.674)
O4': (-14.009,-76.548,45.053)
C8: (-16.338,-75.233,44.267)
O2': (-12.914,-75.184,47.572)
C6: (-16.994,-71.869,43.467)
C5: (-16.598,-73.161,43.857)
C4: (-15.413,-73.267,44.561)
P: (-16.743,-79.198,43.884)
C4': (-14.159,-77.464,46.162)
C2': (-14.223,-75.277,47.041)
C2: (-15.076,-71.101,44.491)
N1: (-16.194,-70.840,43.808)
N3: (-14.597,-72.269,44.913)
N6: (-18.104,-71.604,42.788)
N7: (-17.176,-74.412,43.678)
N9: (-15.246,-74.606,44.818)
O5': (-16.119,-78.288,45.034)
O3': (-14.489,-77.218,48.524)
Image (generated by PyMOL):
PyMOL image
show in jmol