ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1OOA:C8:C9

Extra

PDB:
ATOM 1 O3' G A 7 16.143 -28.934 26.830 1.00 24.19 O
ATOM 2 P A A 8 16.113 -29.935 25.598 1.00 30.89 P
ATOM 3 OP1 A A 8 14.836 -30.689 25.681 1.00 32.34 O
ATOM 4 OP2 A A 8 17.409 -30.663 25.625 1.00 35.40 O
ATOM 5 O5' A A 8 16.122 -28.972 24.332 1.00 25.22 O
ATOM 6 C5' A A 8 15.393 -29.303 23.153 1.00 37.76 C
ATOM 7 C4' A A 8 14.076 -28.560 23.132 1.00 39.45 C
ATOM 8 O4' A A 8 14.315 -27.138 23.289 1.00 39.16 O
ATOM 9 C3' A A 8 13.269 -28.687 21.851 1.00 33.17 C
ATOM 10 O3' A A 8 12.408 -29.808 21.949 1.00 35.33 O
ATOM 11 C2' A A 8 12.451 -27.407 21.866 1.00 29.00 C
ATOM 12 O2' A A 8 11.385 -27.520 22.789 1.00 28.06 O
ATOM 13 C1' A A 8 13.471 -26.414 22.418 1.00 36.22 C
ATOM 14 N9 A A 8 14.325 -25.781 21.416 1.00 36.99 N
ATOM 15 C8 A A 8 15.660 -26.018 21.214 1.00 26.41 C
ATOM 16 N7 A A 8 16.192 -25.283 20.278 1.00 41.92 N
ATOM 17 C5 A A 8 15.135 -24.509 19.822 1.00 47.99 C
ATOM 18 C6 A A 8 15.050 -23.516 18.833 1.00 46.63 C
ATOM 19 N6 A A 8 16.093 -23.119 18.097 1.00 43.15 N
ATOM 20 N1 A A 8 13.845 -22.940 18.624 1.00 45.38 N
ATOM 21 C2 A A 8 12.807 -23.342 19.366 1.00 39.17 C
ATOM 22 N3 A A 8 12.763 -24.259 20.328 1.00 41.10 N
ATOM 23 C4 A A 8 13.974 -24.813 20.509 1.00 42.19 C
ATOM 24 P A A 9 12.000 -30.608 20.630 1.00 38.67 P
ATOM 25 OP1 A A 9 10.856 -31.474 21.002 1.00 41.11 O
ATOM 26 OP2 A A 9 13.240 -31.217 20.081 1.00 45.25 O
ATOM 27 O5' A A 9 11.490 -29.480 19.631 1.00 41.05 O
TER

ATOM 1 O3' A B 8 12.408 -29.808 21.949 1.00 35.33 O
ATOM 2 P A B 9 12.000 -30.608 20.630 1.00 38.67 P
ATOM 3 OP1 A B 9 10.856 -31.474 21.002 1.00 41.11 O
ATOM 4 OP2 A B 9 13.240 -31.217 20.081 1.00 45.25 O
ATOM 5 O5' A B 9 11.490 -29.480 19.631 1.00 41.05 O
ATOM 6 C5' A B 9 10.177 -28.941 19.770 1.00 41.29 C
ATOM 7 C4' A B 9 9.920 -27.878 18.725 1.00 45.79 C
ATOM 8 O4' A B 9 10.743 -26.704 18.996 1.00 39.80 O
ATOM 9 C3' A B 9 10.224 -28.234 17.274 1.00 40.98 C
ATOM 10 O3' A B 9 9.200 -29.090 16.749 1.00 37.45 O
ATOM 11 C2' A B 9 10.378 -26.842 16.673 1.00 42.24 C
ATOM 12 O2' A B 9 9.144 -26.157 16.547 1.00 38.08 O
ATOM 13 C1' A B 9 11.205 -26.160 17.771 1.00 38.93 C
ATOM 14 N9 A B 9 12.641 -26.445 17.683 1.00 40.34 N
ATOM 15 C8 A B 9 13.341 -27.364 18.425 1.00 36.67 C
ATOM 16 N7 A B 9 14.616 -27.409 18.143 1.00 39.95 N
ATOM 17 C5 A B 9 14.772 -26.459 17.144 1.00 40.78 C
ATOM 18 C6 A B 9 15.897 -26.021 16.421 1.00 43.68 C
ATOM 19 N6 A B 9 17.127 -26.518 16.594 1.00 47.23 N
ATOM 20 N1 A B 9 15.715 -25.043 15.504 1.00 38.40 N
ATOM 21 C2 A B 9 14.488 -24.553 15.331 1.00 32.90 C
ATOM 22 N3 A B 9 13.354 -24.886 15.944 1.00 40.84 N
ATOM 23 C4 A B 9 13.566 -25.855 16.851 1.00 40.14 C
ATOM 24 P A B 10 8.785 -29.053 15.185 1.00 46.29 P
ATOM 25 OP1 A B 10 8.365 -27.679 14.805 1.00 61.74 O
ATOM 26 OP2 A B 10 7.829 -30.175 15.044 1.00 45.92 O
ATOM 27 O5' A B 10 10.060 -29.440 14.300 1.00 41.79 O
TER

Atoms:
OP1: (14.836,-30.689,25.681)
OP2: (17.409,-30.663,25.625)
C3': (13.269,-28.687,21.851)
C1': (13.471,-26.414,22.418)
C5': (15.393,-29.303,23.153)
O4': (14.315,-27.138,23.289)
C8: (15.660,-26.018,21.214)
O2': (11.385,-27.520,22.789)
C6: (15.050,-23.516,18.833)
C5: (15.135,-24.509,19.822)
C4: (13.974,-24.813,20.509)
P: (16.113,-29.935,25.598)
C4': (14.076,-28.560,23.132)
C2': (12.451,-27.407,21.866)
C2: (12.807,-23.342,19.366)
N1: (13.845,-22.940,18.624)
N3: (12.763,-24.259,20.328)
N6: (16.093,-23.119,18.097)
N7: (16.192,-25.283,20.278)
N9: (14.325,-25.781,21.416)
O5': (16.122,-28.972,24.332)
O3': (12.408,-29.808,21.949)
OP1: (10.856,-31.474,21.002)
OP2: (13.240,-31.217,20.081)
C3': (10.224,-28.234,17.274)
C1': (11.205,-26.160,17.771)
C5': (10.177,-28.941,19.770)
O4': (10.743,-26.704,18.996)
C8: (13.341,-27.364,18.425)
O2': (9.144,-26.157,16.547)
C6: (15.897,-26.021,16.421)
C5: (14.772,-26.459,17.144)
C4: (13.566,-25.855,16.851)
P: (12.000,-30.608,20.630)
C4': (9.920,-27.878,18.725)
C2': (10.378,-26.842,16.673)
C2: (14.488,-24.553,15.331)
N1: (15.715,-25.043,15.504)
N3: (13.354,-24.886,15.944)
N6: (17.127,-26.518,16.594)
N7: (14.616,-27.409,18.143)
N9: (12.641,-26.445,17.683)
O5': (11.490,-29.480,19.631)
O3': (9.200,-29.090,16.749)
Image (generated by PyMOL):
PyMOL image
show in jmol