Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2176:A2177
Extra
PDB:
ATOM 1 O3' U A2175 -99.947 11.950 56.367 1.00125.37 O
ATOM 2 P A A2176 -98.794 11.292 57.273 1.00102.49 P
ATOM 3 OP1 A A2176 -97.988 10.416 56.386 1.00102.49 O
ATOM 4 OP2 A A2176 -99.461 10.689 58.458 1.00102.49 O
ATOM 5 O5' A A2176 -97.937 12.553 57.718 1.00102.49 O
ATOM 6 C5' A A2176 -98.505 13.854 57.717 1.00102.49 C
ATOM 7 C4' A A2176 -98.320 14.526 59.046 1.00102.49 C
ATOM 8 O4' A A2176 -99.609 14.684 59.704 1.00102.49 O
ATOM 9 C3' A A2176 -97.496 13.755 60.063 1.00102.49 C
ATOM 10 O3' A A2176 -96.096 13.825 59.839 1.00102.49 O
ATOM 11 C2' A A2176 -97.961 14.378 61.368 1.00102.49 C
ATOM 12 O2' A A2176 -97.446 15.698 61.520 1.00102.49 O
ATOM 13 C1' A A2176 -99.459 14.467 61.097 1.00102.49 C
ATOM 14 N9 A A2176 -100.151 13.206 61.446 1.00102.17 N
ATOM 15 C8 A A2176 -100.393 12.167 60.584 1.00102.17 C
ATOM 16 N7 A A2176 -101.017 11.147 61.121 1.00102.17 N
ATOM 17 C5 A A2176 -101.201 11.533 62.442 1.00102.17 C
ATOM 18 C6 A A2176 -101.805 10.884 63.538 1.00102.17 C
ATOM 19 N6 A A2176 -102.357 9.671 63.459 1.00102.17 N
ATOM 20 N1 A A2176 -101.825 11.532 64.727 1.00102.17 N
ATOM 21 C2 A A2176 -101.274 12.754 64.790 1.00102.17 C
ATOM 22 N3 A A2176 -100.678 13.466 63.831 1.00102.17 N
ATOM 23 C4 A A2176 -100.671 12.798 62.661 1.00102.17 C
ATOM 24 P A A2177 -95.121 12.701 60.467 1.00 99.67 P
ATOM 25 OP1 A A2177 -93.937 12.602 59.584 1.00 99.67 O
ATOM 26 OP2 A A2177 -95.944 11.479 60.692 1.00 99.67 O
ATOM 27 O5' A A2177 -94.709 13.351 61.868 1.00 99.67 O
TER
ATOM 1 O3' A B2176 -96.096 13.825 59.839 1.00102.49 O
ATOM 2 P A B2177 -95.121 12.701 60.467 1.00 99.67 P
ATOM 3 OP1 A B2177 -93.937 12.602 59.584 1.00 99.67 O
ATOM 4 OP2 A B2177 -95.944 11.479 60.692 1.00 99.67 O
ATOM 5 O5' A B2177 -94.709 13.351 61.868 1.00 99.67 O
ATOM 6 C5' A B2177 -94.767 14.761 62.059 1.00 99.67 C
ATOM 7 C4' A B2177 -95.184 15.117 63.463 1.00 99.67 C
ATOM 8 O4' A B2177 -96.597 14.861 63.649 1.00 99.67 O
ATOM 9 C3' A B2177 -94.515 14.323 64.562 1.00 99.67 C
ATOM 10 O3' A B2177 -93.230 14.816 64.870 1.00 99.67 O
ATOM 11 C2' A B2177 -95.507 14.423 65.717 1.00 99.67 C
ATOM 12 O2' A B2177 -95.347 15.639 66.428 1.00 99.67 O
ATOM 13 C1' A B2177 -96.845 14.460 64.983 1.00 99.67 C
ATOM 14 N9 A B2177 -97.513 13.143 64.971 1.00 98.97 N
ATOM 15 C8 A B2177 -97.600 12.271 63.909 1.00 98.97 C
ATOM 16 N7 A B2177 -98.264 11.174 64.164 1.00 98.97 N
ATOM 17 C5 A B2177 -98.646 11.327 65.487 1.00 98.97 C
ATOM 18 C6 A B2177 -99.381 10.479 66.328 1.00 98.97 C
ATOM 19 N6 A B2177 -99.841 9.304 65.889 1.00 98.97 N
ATOM 20 N1 A B2177 -99.609 10.887 67.604 1.00 98.97 N
ATOM 21 C2 A B2177 -99.118 12.088 67.970 1.00 98.97 C
ATOM 22 N3 A B2177 -98.409 12.976 67.262 1.00 98.97 N
ATOM 23 C4 A B2177 -98.201 12.533 66.005 1.00 98.97 C
ATOM 24 P U B2178 -92.114 13.835 65.463 1.00 86.40 P
ATOM 25 OP1 U B2178 -90.801 14.302 64.932 1.00 86.40 O
ATOM 26 OP2 U B2178 -92.561 12.445 65.173 1.00 86.40 O
ATOM 27 O5' U B2178 -92.197 14.112 67.026 1.00 86.40 O
TER
ATOM 2 P A A2176 -98.794 11.292 57.273 1.00102.49 P
ATOM 3 OP1 A A2176 -97.988 10.416 56.386 1.00102.49 O
ATOM 4 OP2 A A2176 -99.461 10.689 58.458 1.00102.49 O
ATOM 5 O5' A A2176 -97.937 12.553 57.718 1.00102.49 O
ATOM 6 C5' A A2176 -98.505 13.854 57.717 1.00102.49 C
ATOM 7 C4' A A2176 -98.320 14.526 59.046 1.00102.49 C
ATOM 8 O4' A A2176 -99.609 14.684 59.704 1.00102.49 O
ATOM 9 C3' A A2176 -97.496 13.755 60.063 1.00102.49 C
ATOM 10 O3' A A2176 -96.096 13.825 59.839 1.00102.49 O
ATOM 11 C2' A A2176 -97.961 14.378 61.368 1.00102.49 C
ATOM 12 O2' A A2176 -97.446 15.698 61.520 1.00102.49 O
ATOM 13 C1' A A2176 -99.459 14.467 61.097 1.00102.49 C
ATOM 14 N9 A A2176 -100.151 13.206 61.446 1.00102.17 N
ATOM 15 C8 A A2176 -100.393 12.167 60.584 1.00102.17 C
ATOM 16 N7 A A2176 -101.017 11.147 61.121 1.00102.17 N
ATOM 17 C5 A A2176 -101.201 11.533 62.442 1.00102.17 C
ATOM 18 C6 A A2176 -101.805 10.884 63.538 1.00102.17 C
ATOM 19 N6 A A2176 -102.357 9.671 63.459 1.00102.17 N
ATOM 20 N1 A A2176 -101.825 11.532 64.727 1.00102.17 N
ATOM 21 C2 A A2176 -101.274 12.754 64.790 1.00102.17 C
ATOM 22 N3 A A2176 -100.678 13.466 63.831 1.00102.17 N
ATOM 23 C4 A A2176 -100.671 12.798 62.661 1.00102.17 C
ATOM 24 P A A2177 -95.121 12.701 60.467 1.00 99.67 P
ATOM 25 OP1 A A2177 -93.937 12.602 59.584 1.00 99.67 O
ATOM 26 OP2 A A2177 -95.944 11.479 60.692 1.00 99.67 O
ATOM 27 O5' A A2177 -94.709 13.351 61.868 1.00 99.67 O
TER
ATOM 1 O3' A B2176 -96.096 13.825 59.839 1.00102.49 O
ATOM 2 P A B2177 -95.121 12.701 60.467 1.00 99.67 P
ATOM 3 OP1 A B2177 -93.937 12.602 59.584 1.00 99.67 O
ATOM 4 OP2 A B2177 -95.944 11.479 60.692 1.00 99.67 O
ATOM 5 O5' A B2177 -94.709 13.351 61.868 1.00 99.67 O
ATOM 6 C5' A B2177 -94.767 14.761 62.059 1.00 99.67 C
ATOM 7 C4' A B2177 -95.184 15.117 63.463 1.00 99.67 C
ATOM 8 O4' A B2177 -96.597 14.861 63.649 1.00 99.67 O
ATOM 9 C3' A B2177 -94.515 14.323 64.562 1.00 99.67 C
ATOM 10 O3' A B2177 -93.230 14.816 64.870 1.00 99.67 O
ATOM 11 C2' A B2177 -95.507 14.423 65.717 1.00 99.67 C
ATOM 12 O2' A B2177 -95.347 15.639 66.428 1.00 99.67 O
ATOM 13 C1' A B2177 -96.845 14.460 64.983 1.00 99.67 C
ATOM 14 N9 A B2177 -97.513 13.143 64.971 1.00 98.97 N
ATOM 15 C8 A B2177 -97.600 12.271 63.909 1.00 98.97 C
ATOM 16 N7 A B2177 -98.264 11.174 64.164 1.00 98.97 N
ATOM 17 C5 A B2177 -98.646 11.327 65.487 1.00 98.97 C
ATOM 18 C6 A B2177 -99.381 10.479 66.328 1.00 98.97 C
ATOM 19 N6 A B2177 -99.841 9.304 65.889 1.00 98.97 N
ATOM 20 N1 A B2177 -99.609 10.887 67.604 1.00 98.97 N
ATOM 21 C2 A B2177 -99.118 12.088 67.970 1.00 98.97 C
ATOM 22 N3 A B2177 -98.409 12.976 67.262 1.00 98.97 N
ATOM 23 C4 A B2177 -98.201 12.533 66.005 1.00 98.97 C
ATOM 24 P U B2178 -92.114 13.835 65.463 1.00 86.40 P
ATOM 25 OP1 U B2178 -90.801 14.302 64.932 1.00 86.40 O
ATOM 26 OP2 U B2178 -92.561 12.445 65.173 1.00 86.40 O
ATOM 27 O5' U B2178 -92.197 14.112 67.026 1.00 86.40 O
TER
Atoms:
OP1: (-97.988,10.416,56.386)
OP2: (-99.461,10.689,58.458)
C3': (-97.496,13.755,60.063)
C1': (-99.459,14.467,61.097)
C5': (-98.505,13.854,57.717)
O4': (-99.609,14.684,59.704)
C8: (-100.393,12.167,60.584)
O2': (-97.446,15.698,61.520)
C6: (-101.805,10.884,63.538)
C5: (-101.201,11.533,62.442)
C4: (-100.671,12.798,62.661)
P: (-98.794,11.292,57.273)
C4': (-98.320,14.526,59.046)
C2': (-97.961,14.378,61.368)
C2: (-101.274,12.754,64.790)
N1: (-101.825,11.532,64.727)
N3: (-100.678,13.466,63.831)
N6: (-102.357,9.671,63.459)
N7: (-101.017,11.147,61.121)
N9: (-100.151,13.206,61.446)
O5': (-97.937,12.553,57.718)
O3': (-96.096,13.825,59.839)
OP2: (-99.461,10.689,58.458)
C3': (-97.496,13.755,60.063)
C1': (-99.459,14.467,61.097)
C5': (-98.505,13.854,57.717)
O4': (-99.609,14.684,59.704)
C8: (-100.393,12.167,60.584)
O2': (-97.446,15.698,61.520)
C6: (-101.805,10.884,63.538)
C5: (-101.201,11.533,62.442)
C4: (-100.671,12.798,62.661)
P: (-98.794,11.292,57.273)
C4': (-98.320,14.526,59.046)
C2': (-97.961,14.378,61.368)
C2: (-101.274,12.754,64.790)
N1: (-101.825,11.532,64.727)
N3: (-100.678,13.466,63.831)
N6: (-102.357,9.671,63.459)
N7: (-101.017,11.147,61.121)
N9: (-100.151,13.206,61.446)
O5': (-97.937,12.553,57.718)
O3': (-96.096,13.825,59.839)
OP1: (-93.937,12.602,59.584)
OP2: (-95.944,11.479,60.692)
C3': (-94.515,14.323,64.562)
C1': (-96.845,14.460,64.983)
C5': (-94.767,14.761,62.059)
O4': (-96.597,14.861,63.649)
C8: (-97.600,12.271,63.909)
O2': (-95.347,15.639,66.428)
C6: (-99.381,10.479,66.328)
C5: (-98.646,11.327,65.487)
C4: (-98.201,12.533,66.005)
P: (-95.121,12.701,60.467)
C4': (-95.184,15.117,63.463)
C2': (-95.507,14.423,65.717)
C2: (-99.118,12.088,67.970)
N1: (-99.609,10.887,67.604)
N3: (-98.409,12.976,67.262)
N6: (-99.841,9.304,65.889)
N7: (-98.264,11.174,64.164)
N9: (-97.513,13.143,64.971)
O5': (-94.709,13.351,61.868)
O3': (-93.230,14.816,64.870)
OP2: (-95.944,11.479,60.692)
C3': (-94.515,14.323,64.562)
C1': (-96.845,14.460,64.983)
C5': (-94.767,14.761,62.059)
O4': (-96.597,14.861,63.649)
C8: (-97.600,12.271,63.909)
O2': (-95.347,15.639,66.428)
C6: (-99.381,10.479,66.328)
C5: (-98.646,11.327,65.487)
C4: (-98.201,12.533,66.005)
P: (-95.121,12.701,60.467)
C4': (-95.184,15.117,63.463)
C2': (-95.507,14.423,65.717)
C2: (-99.118,12.088,67.970)
N1: (-99.609,10.887,67.604)
N3: (-98.409,12.976,67.262)
N6: (-99.841,9.304,65.889)
N7: (-98.264,11.174,64.164)
N9: (-97.513,13.143,64.971)
O5': (-94.709,13.351,61.868)
O3': (-93.230,14.816,64.870)
Image (generated by PyMOL):