Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1555:A1556
Extra
PDB:
ATOM 1 O3' U A1554 123.994 179.007 80.984 1.00 61.63 O
ATOM 2 P A A1555 123.291 179.609 82.286 1.00 59.64 P
ATOM 3 OP1 A A1555 122.013 180.217 81.858 1.00 59.64 O
ATOM 4 OP2 A A1555 124.295 180.424 83.007 1.00 59.82 O
ATOM 5 O5' A A1555 122.959 178.345 83.188 1.00 57.37 O
ATOM 6 C5' A A1555 122.545 178.523 84.544 1.00 55.78 C
ATOM 7 C4' A A1555 121.969 177.239 85.076 1.00 55.55 C
ATOM 8 O4' A A1555 120.766 176.880 84.338 1.00 55.72 O
ATOM 9 C3' A A1555 122.872 176.046 84.856 1.00 54.75 C
ATOM 10 O3' A A1555 123.921 175.979 85.792 1.00 52.60 O
ATOM 11 C2' A A1555 121.899 174.886 84.926 1.00 54.43 C
ATOM 12 O2' A A1555 121.522 174.598 86.251 1.00 54.40 O
ATOM 13 C1' A A1555 120.715 175.471 84.162 1.00 54.76 C
ATOM 14 N9 A A1555 120.807 175.190 82.728 1.00 54.52 N
ATOM 15 C8 A A1555 121.108 176.070 81.713 1.00 54.35 C
ATOM 16 N7 A A1555 121.066 175.532 80.515 1.00 53.33 N
ATOM 17 C5 A A1555 120.721 174.210 80.758 1.00 53.10 C
ATOM 18 C6 A A1555 120.500 173.130 79.909 1.00 52.74 C
ATOM 19 N6 A A1555 120.530 173.228 78.581 1.00 52.84 N
ATOM 20 N1 A A1555 120.219 171.933 80.474 1.00 53.02 N
ATOM 21 C2 A A1555 120.133 171.851 81.802 1.00 52.76 C
ATOM 22 N3 A A1555 120.285 172.804 82.709 1.00 53.68 N
ATOM 23 C4 A A1555 120.584 173.977 82.118 1.00 53.72 C
ATOM 24 P A A1556 125.371 175.555 85.285 1.00 52.10 P
ATOM 25 OP1 A A1556 126.227 175.591 86.487 1.00 53.17 O
ATOM 26 OP2 A A1556 125.718 176.389 84.096 1.00 51.89 O
ATOM 27 O5' A A1556 125.180 174.043 84.811 1.00 52.24 O
TER
ATOM 1 O3' A B1555 123.921 175.979 85.792 1.00 52.60 O
ATOM 2 P A B1556 125.371 175.555 85.285 1.00 52.10 P
ATOM 3 OP1 A B1556 126.227 175.591 86.487 1.00 53.17 O
ATOM 4 OP2 A B1556 125.718 176.389 84.096 1.00 51.89 O
ATOM 5 O5' A B1556 125.180 174.043 84.811 1.00 52.24 O
ATOM 6 C5' A B1556 124.706 173.027 85.729 1.00 53.94 C
ATOM 7 C4' A B1556 124.471 171.720 85.003 1.00 54.67 C
ATOM 8 O4' A B1556 123.339 171.847 84.098 1.00 54.76 O
ATOM 9 C3' A B1556 125.603 171.234 84.115 1.00 53.52 C
ATOM 10 O3' A B1556 126.671 170.641 84.851 1.00 50.42 O
ATOM 11 C2' A B1556 124.875 170.312 83.134 1.00 54.46 C
ATOM 12 O2' A B1556 124.534 169.020 83.582 1.00 55.13 O
ATOM 13 C1' A B1556 123.568 171.070 82.935 1.00 54.81 C
ATOM 14 N9 A B1556 123.668 171.969 81.801 1.00 56.05 N
ATOM 15 C8 A B1556 123.808 173.332 81.801 1.00 57.39 C
ATOM 16 N7 A B1556 123.900 173.850 80.601 1.00 57.79 N
ATOM 17 C5 A B1556 123.812 172.751 79.758 1.00 57.02 C
ATOM 18 C6 A B1556 123.861 172.625 78.370 1.00 57.29 C
ATOM 19 N6 A B1556 124.028 173.655 77.540 1.00 58.37 N
ATOM 20 N1 A B1556 123.741 171.386 77.847 1.00 56.04 N
ATOM 21 C2 A B1556 123.597 170.353 78.676 1.00 56.15 C
ATOM 22 N3 A B1556 123.548 170.342 80.001 1.00 57.15 N
ATOM 23 C4 A B1556 123.661 171.590 80.485 1.00 56.74 C
ATOM 24 P U B1557 128.176 170.768 84.300 1.00 47.14 P
ATOM 25 OP1 U B1557 129.062 170.214 85.356 1.00 47.37 O
ATOM 26 OP2 U B1557 128.394 172.144 83.819 1.00 48.14 O
ATOM 27 O5' U B1557 128.205 169.839 83.001 1.00 48.12 O
TER
ATOM 2 P A A1555 123.291 179.609 82.286 1.00 59.64 P
ATOM 3 OP1 A A1555 122.013 180.217 81.858 1.00 59.64 O
ATOM 4 OP2 A A1555 124.295 180.424 83.007 1.00 59.82 O
ATOM 5 O5' A A1555 122.959 178.345 83.188 1.00 57.37 O
ATOM 6 C5' A A1555 122.545 178.523 84.544 1.00 55.78 C
ATOM 7 C4' A A1555 121.969 177.239 85.076 1.00 55.55 C
ATOM 8 O4' A A1555 120.766 176.880 84.338 1.00 55.72 O
ATOM 9 C3' A A1555 122.872 176.046 84.856 1.00 54.75 C
ATOM 10 O3' A A1555 123.921 175.979 85.792 1.00 52.60 O
ATOM 11 C2' A A1555 121.899 174.886 84.926 1.00 54.43 C
ATOM 12 O2' A A1555 121.522 174.598 86.251 1.00 54.40 O
ATOM 13 C1' A A1555 120.715 175.471 84.162 1.00 54.76 C
ATOM 14 N9 A A1555 120.807 175.190 82.728 1.00 54.52 N
ATOM 15 C8 A A1555 121.108 176.070 81.713 1.00 54.35 C
ATOM 16 N7 A A1555 121.066 175.532 80.515 1.00 53.33 N
ATOM 17 C5 A A1555 120.721 174.210 80.758 1.00 53.10 C
ATOM 18 C6 A A1555 120.500 173.130 79.909 1.00 52.74 C
ATOM 19 N6 A A1555 120.530 173.228 78.581 1.00 52.84 N
ATOM 20 N1 A A1555 120.219 171.933 80.474 1.00 53.02 N
ATOM 21 C2 A A1555 120.133 171.851 81.802 1.00 52.76 C
ATOM 22 N3 A A1555 120.285 172.804 82.709 1.00 53.68 N
ATOM 23 C4 A A1555 120.584 173.977 82.118 1.00 53.72 C
ATOM 24 P A A1556 125.371 175.555 85.285 1.00 52.10 P
ATOM 25 OP1 A A1556 126.227 175.591 86.487 1.00 53.17 O
ATOM 26 OP2 A A1556 125.718 176.389 84.096 1.00 51.89 O
ATOM 27 O5' A A1556 125.180 174.043 84.811 1.00 52.24 O
TER
ATOM 1 O3' A B1555 123.921 175.979 85.792 1.00 52.60 O
ATOM 2 P A B1556 125.371 175.555 85.285 1.00 52.10 P
ATOM 3 OP1 A B1556 126.227 175.591 86.487 1.00 53.17 O
ATOM 4 OP2 A B1556 125.718 176.389 84.096 1.00 51.89 O
ATOM 5 O5' A B1556 125.180 174.043 84.811 1.00 52.24 O
ATOM 6 C5' A B1556 124.706 173.027 85.729 1.00 53.94 C
ATOM 7 C4' A B1556 124.471 171.720 85.003 1.00 54.67 C
ATOM 8 O4' A B1556 123.339 171.847 84.098 1.00 54.76 O
ATOM 9 C3' A B1556 125.603 171.234 84.115 1.00 53.52 C
ATOM 10 O3' A B1556 126.671 170.641 84.851 1.00 50.42 O
ATOM 11 C2' A B1556 124.875 170.312 83.134 1.00 54.46 C
ATOM 12 O2' A B1556 124.534 169.020 83.582 1.00 55.13 O
ATOM 13 C1' A B1556 123.568 171.070 82.935 1.00 54.81 C
ATOM 14 N9 A B1556 123.668 171.969 81.801 1.00 56.05 N
ATOM 15 C8 A B1556 123.808 173.332 81.801 1.00 57.39 C
ATOM 16 N7 A B1556 123.900 173.850 80.601 1.00 57.79 N
ATOM 17 C5 A B1556 123.812 172.751 79.758 1.00 57.02 C
ATOM 18 C6 A B1556 123.861 172.625 78.370 1.00 57.29 C
ATOM 19 N6 A B1556 124.028 173.655 77.540 1.00 58.37 N
ATOM 20 N1 A B1556 123.741 171.386 77.847 1.00 56.04 N
ATOM 21 C2 A B1556 123.597 170.353 78.676 1.00 56.15 C
ATOM 22 N3 A B1556 123.548 170.342 80.001 1.00 57.15 N
ATOM 23 C4 A B1556 123.661 171.590 80.485 1.00 56.74 C
ATOM 24 P U B1557 128.176 170.768 84.300 1.00 47.14 P
ATOM 25 OP1 U B1557 129.062 170.214 85.356 1.00 47.37 O
ATOM 26 OP2 U B1557 128.394 172.144 83.819 1.00 48.14 O
ATOM 27 O5' U B1557 128.205 169.839 83.001 1.00 48.12 O
TER
Atoms:
OP1: (122.013,180.217,81.858)
OP2: (124.295,180.424,83.007)
C3': (122.872,176.046,84.856)
C1': (120.715,175.471,84.162)
C5': (122.545,178.523,84.544)
O4': (120.766,176.880,84.338)
C8: (121.108,176.070,81.713)
O2': (121.522,174.598,86.251)
C6: (120.500,173.130,79.909)
C5: (120.721,174.210,80.758)
C4: (120.584,173.977,82.118)
P: (123.291,179.609,82.286)
C4': (121.969,177.239,85.076)
C2': (121.899,174.886,84.926)
C2: (120.133,171.851,81.802)
N1: (120.219,171.933,80.474)
N3: (120.285,172.804,82.709)
N6: (120.530,173.228,78.581)
N7: (121.066,175.532,80.515)
N9: (120.807,175.190,82.728)
O5': (122.959,178.345,83.188)
O3': (123.921,175.979,85.792)
OP2: (124.295,180.424,83.007)
C3': (122.872,176.046,84.856)
C1': (120.715,175.471,84.162)
C5': (122.545,178.523,84.544)
O4': (120.766,176.880,84.338)
C8: (121.108,176.070,81.713)
O2': (121.522,174.598,86.251)
C6: (120.500,173.130,79.909)
C5: (120.721,174.210,80.758)
C4: (120.584,173.977,82.118)
P: (123.291,179.609,82.286)
C4': (121.969,177.239,85.076)
C2': (121.899,174.886,84.926)
C2: (120.133,171.851,81.802)
N1: (120.219,171.933,80.474)
N3: (120.285,172.804,82.709)
N6: (120.530,173.228,78.581)
N7: (121.066,175.532,80.515)
N9: (120.807,175.190,82.728)
O5': (122.959,178.345,83.188)
O3': (123.921,175.979,85.792)
OP1: (126.227,175.591,86.487)
OP2: (125.718,176.389,84.096)
C3': (125.603,171.234,84.115)
C1': (123.568,171.070,82.935)
C5': (124.706,173.027,85.729)
O4': (123.339,171.847,84.098)
C8: (123.808,173.332,81.801)
O2': (124.534,169.020,83.582)
C6: (123.861,172.625,78.370)
C5: (123.812,172.751,79.758)
C4: (123.661,171.590,80.485)
P: (125.371,175.555,85.285)
C4': (124.471,171.720,85.003)
C2': (124.875,170.312,83.134)
C2: (123.597,170.353,78.676)
N1: (123.741,171.386,77.847)
N3: (123.548,170.342,80.001)
N6: (124.028,173.655,77.540)
N7: (123.900,173.850,80.601)
N9: (123.668,171.969,81.801)
O5': (125.180,174.043,84.811)
O3': (126.671,170.641,84.851)
OP2: (125.718,176.389,84.096)
C3': (125.603,171.234,84.115)
C1': (123.568,171.070,82.935)
C5': (124.706,173.027,85.729)
O4': (123.339,171.847,84.098)
C8: (123.808,173.332,81.801)
O2': (124.534,169.020,83.582)
C6: (123.861,172.625,78.370)
C5: (123.812,172.751,79.758)
C4: (123.661,171.590,80.485)
P: (125.371,175.555,85.285)
C4': (124.471,171.720,85.003)
C2': (124.875,170.312,83.134)
C2: (123.597,170.353,78.676)
N1: (123.741,171.386,77.847)
N3: (123.548,170.342,80.001)
N6: (124.028,173.655,77.540)
N7: (123.900,173.850,80.601)
N9: (123.668,171.969,81.801)
O5': (125.180,174.043,84.811)
O3': (126.671,170.641,84.851)
Image (generated by PyMOL):